Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 107

1.

Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma.

Guo T, Zambo KDA, Zamuner FT, Ou T, Hopkins C, Kelley DZ, Wulf HA, Winkler E, Erbe R, Danilova L, Considine M, Sidransky D, Favorov A, Florea L, Fertig EJ, Gaykalova DA.

Epigenetics. 2020 Mar 22:1-13. doi: 10.1080/15592294.2020.1741757. [Epub ahead of print]

PMID:
32164487
2.

3D Printed Sugar-Sensing Hydrogels.

Bruen D, Delaney C, Chung J, Ruberu K, Wallace GG, Diamond D, Florea L.

Macromol Rapid Commun. 2020 Feb 24:e1900610. doi: 10.1002/marc.201900610. [Epub ahead of print]

PMID:
32090394
3.

Silicon Microcantilever Sensors to Detect the Reversible Conformational Change of a Molecular Switch, Spiropyan.

Grogan C, Amarandei G, Lawless S, Pedreschi F, Lyng F, Benito-Lopez F, Raiteri R, Florea L.

Sensors (Basel). 2020 Feb 6;20(3). pii: E854. doi: 10.3390/s20030854.

4.

Impact of lifestyle and demographics on the gut microbiota of acne patients and the response to minocycline.

Rainer BM, Thompson KG, Antonescu C, Florea L, Mongodin EF, Kang S, Chien AL.

J Dermatolog Treat. 2020 Feb 5:1-2. doi: 10.1080/09546634.2020.1720583. [Epub ahead of print] No abstract available.

PMID:
32020823
5.

Variability in skin microbiota between smokers, former smokers, and nonsmokers.

Thompson KG, Shuster M, Ly BC, Antonescu C, Florea L, Chien AL, Kang S.

J Am Acad Dermatol. 2020 Jan 28. pii: S0190-9622(20)30126-2. doi: 10.1016/j.jaad.2020.01.042. [Epub ahead of print] No abstract available.

PMID:
32004647
6.

Small-scale pig producers and disease surveillance: key threats.

Williamson S, Bidewell C, Pittalis L, Brena C, Richey M, Florea L, Wight A, Wilson L, Amato B.

Vet Rec. 2020 Jan 4;186(1):19-21. doi: 10.1136/vr.m69.

PMID:
31919254
7.

Apolipoproteins A and B and PCSK9: Nontraditional Cardiovascular Risk Factors in Chronic Kidney Disease and in End-Stage Renal Disease.

Vlad CE, Foia L, Popescu R, Ivanov I, Luca MC, Delianu C, Toma V, Statescu C, Rezus C, Florea L.

J Diabetes Res. 2019 Dec 14;2019:6906278. doi: 10.1155/2019/6906278. eCollection 2019. Review.

8.

A multi-sample approach increases the accuracy of transcript assembly.

Song L, Sabunciyan S, Yang G, Florea L.

Nat Commun. 2019 Nov 1;10(1):5000. doi: 10.1038/s41467-019-12990-0.

9.

Characterization and Analysis of the Skin Microbiota in Rosacea: A Case-Control Study.

Rainer BM, Thompson KG, Antonescu C, Florea L, Mongodin EF, Bui J, Fischer AH, Pasieka HB, Garza LA, Kang S, Chien AL.

Am J Clin Dermatol. 2020 Feb;21(1):139-147. doi: 10.1007/s40257-019-00471-5.

PMID:
31502207
10.

ZCCHC8, the nuclear exosome targeting component, is mutated in familial pulmonary fibrosis and is required for telomerase RNA maturation.

Gable DL, Gaysinskaya V, Atik CC, Talbot CC Jr, Kang B, Stanley SE, Pugh EW, Amat-Codina N, Schenk KM, Arcasoy MO, Brayton C, Florea L, Armanios M.

Genes Dev. 2019 Oct 1;33(19-20):1381-1396. doi: 10.1101/gad.326785.119. Epub 2019 Sep 5.

11.

Evaluation of low-dose glucocorticoid regimen in association with cyclophosphamide in patients with glomerulonephritis.

Hirja AR, Voroneanu L, Siriopol D, Nistor I, Hogas S, Apetrii M, Volovat C, Veisa G, Mititiuc IL, Florea L, Onofriescu M, Covic A.

Int Urol Nephrol. 2019 Oct;51(10):1805-1813. doi: 10.1007/s11255-019-02249-4. Epub 2019 Aug 5.

PMID:
31385176
12.

Dual Droplet Functionality: Phototaxis and Photopolymerization.

Zarghami S, Xiao Y, Wagner P, Florea L, Diamond D, Officer DL, Wagner K.

ACS Appl Mater Interfaces. 2019 Aug 28;11(34):31484-31489. doi: 10.1021/acsami.9b08697. Epub 2019 Aug 13.

PMID:
31365224
13.

Changes in Gut Microbiome after Bariatric Surgery Versus Medical Weight Loss in a Pilot Randomized Trial.

Lee CJ, Florea L, Sears CL, Maruthur N, Potter JJ, Schweitzer M, Magnuson T, Clark JM.

Obes Surg. 2019 Oct;29(10):3239-3245. doi: 10.1007/s11695-019-03976-4.

PMID:
31256356
14.

A Prospective Study of the Urinary and Gastrointestinal Microbiome in Prepubertal Males.

Kassiri B, Shrestha E, Kasprenski M, Antonescu C, Florea LD, Sfanos KS, Wang MH.

Urology. 2019 Sep;131:204-210. doi: 10.1016/j.urology.2019.05.031. Epub 2019 Jun 10.

PMID:
31195012
15.

Non-Specific Onset of Pulmonary Adenocarcinoma.

Kamal KC, Florea L, Kamal D, Alexandru DO, Kamal AM.

Curr Health Sci J. 2018 Oct-Dec;44(4):381-386. doi: 10.12865/CHSJ.44.04.10. Epub 2018 Dec 31.

16.

A comprehensive review on apolipoproteins as nontraditional cardiovascular risk factors in end-stage renal disease: current evidence and perspectives.

Vlad C, Burlacu A, Florea L, Artene B, Badarau S, Covic A, Ureche C, Scripcariu D, Foia L, Covic A.

Int Urol Nephrol. 2019 Jul;51(7):1173-1189. doi: 10.1007/s11255-019-02170-w. Epub 2019 May 22. Review.

PMID:
31119518
17.

Paper based electronic tongue - a low-cost solution for the distinction of sugar type and apple juice brand.

Daikuzono CM, Delaney C, Morrin A, Diamond D, Florea L, Oliveira ON.

Analyst. 2019 Apr 8;144(8):2827-2832. doi: 10.1039/c8an01934g.

PMID:
30887969
18.

Fluorescent Probes for Sugar Detection.

Bruen D, Delaney C, Diamond D, Florea L.

ACS Appl Mater Interfaces. 2018 Nov 7;10(44):38431-38437. doi: 10.1021/acsami.8b13365. Epub 2018 Oct 24.

PMID:
30360068
19.

Taylorella asinigenitalis in an onager in a UK zoo.

Mawhinney I, Florea L, Torrens N, Thurston L, Poynter R.

Vet Rec. 2018 Sep 1;183(8):266. doi: 10.1136/vr.k3687. No abstract available.

PMID:
30171118
20.

Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma.

Kelley DZ, Flam EL, Guo T, Danilova LV, Zamuner FT, Bohrson C, Considine M, Windsor EJ, Bishop JA, Zhang C, Koch WM, Sidransky D, Westra WH, Chung CH, Califano JA, Wheelan S, Favorov AV, Florea L, Fertig EJ, Gaykalova DA.

Transl Res. 2018 Dec;202:109-119. doi: 10.1016/j.trsl.2018.07.007. Epub 2018 Jul 26.

21.

Moving Droplets in 3D Using Light.

Xiao Y, Zarghami S, Wagner K, Wagner P, Gordon KC, Florea L, Diamond D, Officer DL.

Adv Mater. 2018 Aug;30(35):e1801821. doi: 10.1002/adma.201801821. Epub 2018 Jul 8.

PMID:
29984459
22.

Micro-Capillary Coatings Based on Spiropyran Polymeric Brushes for Metal Ion Binding, Detection, and Release in Continuous Flow.

Dunne A, Delaney C, McKeon A, Nesterenko P, Paull B, Benito-Lopez F, Diamond D, Florea L.

Sensors (Basel). 2018 Apr 4;18(4). pii: E1083. doi: 10.3390/s18041083.

23.

Photoswitchable Layer-by-Layer Coatings Based on Photochromic Polynorbornenes Bearing Spiropyran Side Groups.

Campos PP, Dunne A, Delaney C, Moloney C, Moulton SE, Benito-Lopez F, Ferreira M, Diamond D, Florea L.

Langmuir. 2018 Apr 10;34(14):4210-4216. doi: 10.1021/acs.langmuir.8b00137. Epub 2018 Mar 30.

PMID:
29553744
24.

Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.

Afsari B, Guo T, Considine M, Florea L, Kagohara LT, Stein-O'Brien GL, Kelley D, Flam E, Zambo KD, Ha PK, Geman D, Ochs MF, Califano JA, Gaykalova DA, Favorov AV, Fertig EJ.

Bioinformatics. 2018 Jun 1;34(11):1859-1867. doi: 10.1093/bioinformatics/bty004.

25.

Germline Mutations in DNA Repair Genes in Lung Adenocarcinoma.

Parry EM, Gable DL, Stanley SE, Khalil SE, Antonescu V, Florea L, Armanios M.

J Thorac Oncol. 2017 Nov;12(11):1673-1678. doi: 10.1016/j.jtho.2017.08.011. Epub 2017 Aug 24.

26.

Glucose Sensing for Diabetes Monitoring: Recent Developments.

Bruen D, Delaney C, Florea L, Diamond D.

Sensors (Basel). 2017 Aug 12;17(8). pii: E1866. doi: 10.3390/s17081866. Review.

27.

Thiol-Ene Photo-Click Collagen-PEG Hydrogels: Impact of Water-Soluble Photoinitiators on Cell Viability, Gelation Kinetics and Rheological Properties.

Holmes R, Yang XB, Dunne A, Florea L, Wood D, Tronci G.

Polymers (Basel). 2017 Jun 14;9(6). pii: E226. doi: 10.3390/polym9060226.

28.

Impedance spectroscopy for monosaccharides detection using responsive hydrogel modified paper-based electrodes.

Daikuzono CM, Delaney C, Tesfay H, Florea L, Oliveira ON, Morrin A, Diamond D.

Analyst. 2017 Mar 27;142(7):1133-1139. doi: 10.1039/c6an02571d.

PMID:
28300229
29.

Rascaf: Improving Genome Assembly with RNA Sequencing Data.

Song L, Shankar DS, Florea L.

Plant Genome. 2016 Nov;9(3). doi: 10.3835/plantgenome2016.03.0027.

30.

Potential Impacts to Groundwater from Ground-Coupled Geothermal Heat Pumps in District Scale.

Florea LJ, Hart D, Tinjum J, Choi C.

Ground Water. 2017 Jan;55(1):8-9. doi: 10.1111/gwat.12484. Epub 2016 Nov 17. No abstract available.

PMID:
27859098
31.

Molecular Triage of Premalignant Lesions in Liquid-Based Cervical Cytology and Circulating Cell-Free DNA from Urine, Using a Panel of Methylated Human Papilloma Virus and Host Genes.

Guerrero-Preston R, Valle BL, Jedlicka A, Turaga N, Folawiyo O, Pirini F, Lawson F, Vergura A, Noordhuis M, Dziedzic A, Pérez G, Renehan M, Guerrero-Diaz C, De Jesus Rodríguez E, Diaz-Montes T, Rodríguez Orengo J, Méndez K, Romaguera J, Trock BJ, Florea L, Sidransky D.

Cancer Prev Res (Phila). 2016 Dec;9(12):915-924. Epub 2016 Sep 26.

32.

CLASS2: accurate and efficient splice variant annotation from RNA-seq reads.

Song L, Sabunciyan S, Florea L.

Nucleic Acids Res. 2016 Jun 2;44(10):e98. doi: 10.1093/nar/gkw158. Epub 2016 Mar 14.

33.

Poly(Ionic Liquid) Semi-Interpenetrating Network Multi-Responsive Hydrogels.

Tudor A, Florea L, Gallagher S, Burns J, Diamond D.

Sensors (Basel). 2016 Feb 6;16(2):219. doi: 10.3390/s16020219.

34.

ENDOTHELIAL DYSFUNCTION ASSESSED BY LASER DOPPLER POST-OCCLUSIVE HYPEREMIA IN CHRONIC KIDNEY DISEASE PATIENTS.

Busila I, Onofriescu M, Gramaticu A, Hogas S, Covic A, Florea L.

Rev Med Chir Soc Med Nat Iasi. 2015 Oct-Dec;119(4):1001-9.

PMID:
26793841
35.

Three-Dimensional Printing: Transformative Technology for Experimental Groundwater Research.

Hasiuk FJ, Florea LJ, Sukop MC.

Ground Water. 2016 Mar;54(2):157-8. doi: 10.1111/gwat.12394. Epub 2015 Dec 29. No abstract available.

PMID:
26714140
36.

Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads.

Song L, Florea L.

Gigascience. 2015 Oct 19;4:48. doi: 10.1186/s13742-015-0089-y. eCollection 2015.

37.

Overhydration, Cardiac Function and Survival in Hemodialysis Patients.

Onofriescu M, Siriopol D, Voroneanu L, Hogas S, Nistor I, Apetrii M, Florea L, Veisa G, Mititiuc I, Kanbay M, Sascau R, Covic A.

PLoS One. 2015 Aug 14;10(8):e0135691. doi: 10.1371/journal.pone.0135691. eCollection 2015.

38.

Viral non-coding RNA inhibits HNF4α expression in HCV associated hepatocellular carcinoma.

Wang Z, Ceniccola K, Florea L, Wang BD, Lee NH, Kumar A.

Infect Agent Cancer. 2015 Jul 8;10:19. doi: 10.1186/s13027-015-0014-0. eCollection 2015.

39.

Self-propelled chemotactic ionic liquid droplets.

Francis W, Fay C, Florea L, Diamond D.

Chem Commun (Camb). 2015 Feb 11;51(12):2342-4. doi: 10.1039/c4cc09214g.

PMID:
25562698
40.
41.

Morphological changes of the peritoneal membrane in patients with long-term dialysis.

Tăranu T, Florea L, Păduraru D, Georgescu SO, Frâncu LL, Stan CI.

Rom J Morphol Embryol. 2014;55(3):927-32.

42.

Photo-chemopropulsion--light-stimulated movement of microdroplets.

Florea L, Wagner K, Wagner P, Wallace GG, Benito-Lopez F, Officer DL, Diamond D.

Adv Mater. 2014 Nov 19;26(43):7339-45. doi: 10.1002/adma.201403007. Epub 2014 Sep 18.

PMID:
25236879
43.

Loss of nuclear PTEN in HCV-infected human hepatocytes.

Bao W, Florea L, Wu N, Wang Z, Banaudha K, Qian J, Houzet L, Kumar R, Kumar A.

Infect Agent Cancer. 2014 Jul 18;9:23. doi: 10.1186/1750-9378-9-23. eCollection 2014.

44.

Photoswitchable ratchet surface topographies based on self-protonating spiropyran-NIPAAM hydrogels.

Stumpel JE, Ziółkowski B, Florea L, Diamond D, Broer DJ, Schenning AP.

ACS Appl Mater Interfaces. 2014 May 28;6(10):7268-74. doi: 10.1021/am500542f. Epub 2014 May 16.

PMID:
24813057
45.

Swelling and shrinking properties of thermo-responsive polymeric ionic liquid hydrogels with embedded linear pNIPAAM.

Gallagher S, Florea L, Fraser KJ, Diamond D.

Int J Mol Sci. 2014 Mar 27;15(4):5337-49. doi: 10.3390/ijms15045337.

46.

Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues.

Florea L, Song L, Salzberg SL.

Version 2. F1000Res. 2013 Sep 16 [revised 2013 Jan 1];2:188. doi: 10.12688/f1000research.2-188.v2. eCollection 2013.

47.

Genome-guided transcriptome assembly in the age of next-generation sequencing.

Florea LD, Salzberg SL.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Sep-Oct;10(5):1234-40. Review.

48.

Ionic liquid modulation of swelling and LCST behavior of N-isopropylacrylamide polymer gels.

Gallagher S, Kavanagh A, Zíołkowski B, Florea L, MacFarlane DR, Fraser K, Diamond D.

Phys Chem Chem Phys. 2014 Feb 28;16(8):3610-6. doi: 10.1039/c3cp53397b.

PMID:
24413336
49.

Self-assembled solvato-morphologically controlled photochromic crystals.

Florea L, Scarmagnani S, Benito-Lopez F, Diamond D.

Chem Commun (Camb). 2014 Jan 28;50(8):924-6. doi: 10.1039/c3cc46699j.

PMID:
24169623
50.

CLASS: constrained transcript assembly of RNA-seq reads.

Song L, Florea L.

BMC Bioinformatics. 2013;14 Suppl 5:S14. doi: 10.1186/1471-2105-14-S5-S14. Epub 2013 Apr 10.

Supplemental Content

Loading ...
Support Center