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Items: 38

1.

Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize.

Xue W, Anderson SN, Wang X, Yang L, Crisp PA, Li Q, Noshay J, Albert PS, Birchler JA, Bilinski P, Stitzer MC, Ross-Ibarra J, Flint-Garcia S, Chen X, Springer NM, Doebley JF.

Genetics. 2019 Sep;213(1):143-160. doi: 10.1534/genetics.119.302378. Epub 2019 Jul 18.

2.

Stability Analysis of Kernel Quality Traits in Exotic-Derived Doubled Haploid Maize Lines.

Vanous A, Gardner C, Blanco M, Martin-Schwarze A, Wang J, Li X, Lipka AE, Flint-Garcia S, Bohn M, Edwards J, Lübberstedt T.

Plant Genome. 2019 Mar;12(1). doi: 10.3835/plantgenome2017.12.0114.

3.

Optimal Designs for Genomic Selection in Hybrid Crops.

Guo T, Yu X, Li X, Zhang H, Zhu C, Flint-Garcia S, McMullen MD, Holland JB, Szalma SJ, Wisser RJ, Yu J.

Mol Plant. 2019 Mar 4;12(3):390-401. doi: 10.1016/j.molp.2018.12.022. Epub 2019 Jan 6.

PMID:
30625380
4.

Association Mapping of Flowering and Height Traits in Germplasm Enhancement of Maize Doubled Haploid (GEM-DH) Lines.

Vanous A, Gardner C, Blanco M, Martin-Schwarze A, Lipka AE, Flint-Garcia S, Bohn M, Edwards J, Lübberstedt T.

Plant Genome. 2018 Jul;11(2). doi: 10.3835/plantgenome2017.09.0083.

5.

Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets.

AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, Graham C, Hirsch C, Holland JB, Hooker D, Kaeppler S, Knoll J, Lauter N, Lee EC, Lorenz A, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Rodriguez O, Schnable JC, Scully B, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Ertl D, Schnable PS, De Leon N, Spalding EP, Edwards J, Lawrence-Dill CJ.

BMC Res Notes. 2018 Jul 9;11(1):452. doi: 10.1186/s13104-018-3508-1.

6.

Quantitative Trait Loci Mapping of Western Corn Rootworm (Coleoptera: Chrysomelidae) Host Plant Resistance in Two Populations of Doubled Haploid Lines in Maize (Zea mays L.).

Bohn MO, Marroquin JJ, Flint-Garcia S, Dashiell K, Willmot DB, Hibbard BE.

J Econ Entomol. 2018 Feb 9;111(1):435-444. doi: 10.1093/jee/tox310.

PMID:
29228374
7.

The effect of artificial selection on phenotypic plasticity in maize.

Gage JL, Jarquin D, Romay C, Lorenz A, Buckler ES, Kaeppler S, Alkhalifah N, Bohn M, Campbell DA, Edwards J, Ertl D, Flint-Garcia S, Gardiner J, Good B, Hirsch CN, Holland J, Hooker DC, Knoll J, Kolkman J, Kruger G, Lauter N, Lawrence-Dill CJ, Lee E, Lynch J, Murray SC, Nelson R, Petzoldt J, Rocheford T, Schnable J, Schnable PS, Scully B, Smith M, Springer NM, Srinivasan S, Walton R, Weldekidan T, Wisser RJ, Xu W, Yu J, de Leon N.

Nat Commun. 2017 Nov 7;8(1):1348. doi: 10.1038/s41467-017-01450-2.

8.

Genetic Analysis of Teosinte Alleles for Kernel Composition Traits in Maize.

Karn A, Gillman JD, Flint-Garcia SA.

G3 (Bethesda). 2017 Apr 3;7(4):1157-1164. doi: 10.1534/g3.117.039529.

9.

Assessment of Natural Variability of Maize Lipid Transfer Protein Using a Validated Sandwich ELISA.

Gu X, Lee T, Geng T, Liu K, Thoma R, Crowley K, Edrington T, Ward JM, Wang Y, Flint-Garcia S, Bell E, Glenn KC.

J Agric Food Chem. 2017 Mar 1;65(8):1740-1749. doi: 10.1021/acs.jafc.6b03583. Epub 2017 Feb 15.

PMID:
28161956
10.

Expanding Maize Genetic Resources with Predomestication Alleles: Maize-Teosinte Introgression Populations.

Liu Z, Cook J, Melia-Hancock S, Guill K, Bottoms C, Garcia A, Ott O, Nelson R, Recker J, Balint-Kurti P, Larsson S, Lepak N, Buckler E, Trimble L, Tracy W, McMullen MD, Flint-Garcia SA.

Plant Genome. 2016 Mar;9(1). doi: 10.3835/plantgenome2015.07.0053.

11.

Genetic Analysis of Kernel Traits in Maize-Teosinte Introgression Populations.

Liu Z, Garcia A, McMullen MD, Flint-Garcia SA.

G3 (Bethesda). 2016 Aug 9;6(8):2523-30. doi: 10.1534/g3.116.030155.

12.

Metabolomic Assessment of Key Maize Resources: GC-MS and NMR Profiling of Grain from B73 Hybrids of the Nested Association Mapping (NAM) Founders and of Geographically Diverse Landraces.

Venkatesh TV, Chassy AW, Fiehn O, Flint-Garcia S, Zeng Q, Skogerson K, Harrigan GG.

J Agric Food Chem. 2016 Mar 16;64(10):2162-72. doi: 10.1021/acs.jafc.5b04901. Epub 2016 Mar 7.

PMID:
26923484
13.

Compositional assessments of key maize populations: B73 hybrids of the Nested Association Mapping founder lines and diverse landrace inbred lines.

Venkatesh TV, Harrigan GG, Perez T, Flint-Garcia S.

J Agric Food Chem. 2015 Jun 3;63(21):5282-95. doi: 10.1021/acs.jafc.5b00208. Epub 2015 May 22.

PMID:
25966324
14.

Hallauer's Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize.

Teixeira JE, Weldekidan T, de Leon N, Flint-Garcia S, Holland JB, Lauter N, Murray SC, Xu W, Hessel DA, Kleintop AE, Hawk JA, Hallauer A, Wisser RJ.

Heredity (Edinb). 2015 Feb;114(2):229-40. doi: 10.1038/hdy.2014.90. Epub 2014 Nov 5.

15.

Insights into the effects of long-term artificial selection on seed size in maize.

Hirsch CN, Flint-Garcia SA, Beissinger TM, Eichten SR, Deshpande S, Barry K, McMullen MD, Holland JB, Buckler ES, Springer N, Buell CR, de Leon N, Kaeppler SM.

Genetics. 2014 Sep;198(1):409-21. doi: 10.1534/genetics.114.167155. Epub 2014 Jul 17.

16.

The genetic architecture of maize height.

Peiffer JA, Romay MC, Gore MA, Flint-Garcia SA, Zhang Z, Millard MJ, Gardner CA, McMullen MD, Holland JB, Bradbury PJ, Buckler ES.

Genetics. 2014 Apr;196(4):1337-56. doi: 10.1534/genetics.113.159152. Epub 2014 Feb 10.

17.

The genetic architecture of maize stalk strength.

Peiffer JA, Flint-Garcia SA, De Leon N, McMullen MD, Kaeppler SM, Buckler ES.

PLoS One. 2013 Jun 20;8(6):e67066. doi: 10.1371/journal.pone.0067066. Print 2013.

18.

Comprehensive genotyping of the USA national maize inbred seed bank.

Romay MC, Millard MJ, Glaubitz JC, Peiffer JA, Swarts KL, Casstevens TM, Elshire RJ, Acharya CB, Mitchell SE, Flint-Garcia SA, McMullen MD, Holland JB, Buckler ES, Gardner CA.

Genome Biol. 2013 Jun 11;14(6):R55. doi: 10.1186/gb-2013-14-6-r55.

19.

Genetics and consequences of crop domestication.

Flint-Garcia SA.

J Agric Food Chem. 2013 Sep 4;61(35):8267-76. doi: 10.1021/jf305511d. Epub 2013 Jun 14.

20.

Genetic variability of oxalate oxidase activity and elongation in water-stressed primary roots of diverse maize and rice lines.

Voothuluru P, Thompson HJ, Flint-Garcia SA, Sharp RE.

Plant Signal Behav. 2013 Mar;8(3):e23454. doi: 10.4161/psb.23454. Epub 2013 Jan 18.

21.

ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize.

Hung HY, Shannon LM, Tian F, Bradbury PJ, Chen C, Flint-Garcia SA, McMullen MD, Ware D, Buckler ES, Doebley JF, Holland JB.

Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):E1913-21. doi: 10.1073/pnas.1203189109. Epub 2012 Jun 18.

22.

Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels.

Cook JP, McMullen MD, Holland JB, Tian F, Bradbury P, Ross-Ibarra J, Buckler ES, Flint-Garcia SA.

Plant Physiol. 2012 Feb;158(2):824-34. doi: 10.1104/pp.111.185033. Epub 2011 Dec 1.

23.

Distinct genetic architectures for male and female inflorescence traits of maize.

Brown PJ, Upadyayula N, Mahone GS, Tian F, Bradbury PJ, Myles S, Holland JB, Flint-Garcia S, McMullen MD, Buckler ES, Rocheford TR.

PLoS Genet. 2011 Nov;7(11):e1002383. doi: 10.1371/journal.pgen.1002383. Epub 2011 Nov 17.

24.

The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population.

Hung HY, Browne C, Guill K, Coles N, Eller M, Garcia A, Lepak N, Melia-Hancock S, Oropeza-Rosas M, Salvo S, Upadyayula N, Buckler ES, Flint-Garcia S, McMullen MD, Rocheford TR, Holland JB.

Heredity (Edinb). 2012 May;108(5):490-9. doi: 10.1038/hdy.2011.103. Epub 2011 Oct 26.

25.

Genome-wide association study of leaf architecture in the maize nested association mapping population.

Tian F, Bradbury PJ, Brown PJ, Hung H, Sun Q, Flint-Garcia S, Rocheford TR, McMullen MD, Holland JB, Buckler ES.

Nat Genet. 2011 Feb;43(2):159-62. doi: 10.1038/ng.746. Epub 2011 Jan 9.

PMID:
21217756
26.

IView: introgression library visualization and query tool.

Bottoms CA, Flint-Garcia S, McMullen MD.

BMC Bioinformatics. 2010 Oct 7;11 Suppl 6:S28. doi: 10.1186/1471-2105-11-S6-S28.

27.

Physiological and genetic characterization of end-of-day far-red light response in maize seedlings.

Dubois PG, Olsefski GT, Flint-Garcia S, Setter TL, Hoekenga OA, Brutnell TP.

Plant Physiol. 2010 Sep;154(1):173-86. doi: 10.1104/pp.110.159830. Epub 2010 Jul 28.

28.

Genetic analysis of central carbon metabolism unveils an amino acid substitution that alters maize NAD-dependent isocitrate dehydrogenase activity.

Zhang N, Gur A, Gibon Y, Sulpice R, Flint-Garcia S, McMullen MD, Stitt M, Buckler ES.

PLoS One. 2010 Apr 1;5(4):e9991. doi: 10.1371/journal.pone.0009991.

29.

Heterosis is prevalent for multiple traits in diverse maize germplasm.

Flint-Garcia SA, Buckler ES, Tiffin P, Ersoz E, Springer NM.

PLoS One. 2009 Oct 13;4(10):e7433. doi: 10.1371/journal.pone.0007433.

30.

Wide variability in kernel composition, seed characteristics, and zein profiles among diverse maize inbreds, landraces, and teosinte.

Flint-Garcia SA, Bodnar AL, Scott MP.

Theor Appl Genet. 2009 Oct;119(6):1129-42. doi: 10.1007/s00122-009-1115-1. Epub 2009 Aug 22.

PMID:
19701625
31.

Genetic properties of the maize nested association mapping population.

McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, Kroon D, Lepak N, Mitchell SE, Peterson B, Pressoir G, Romero S, Oropeza Rosas M, Salvo S, Yates H, Hanson M, Jones E, Smith S, Glaubitz JC, Goodman M, Ware D, Holland JB, Buckler ES.

Science. 2009 Aug 7;325(5941):737-40. doi: 10.1126/science.1174320.

32.

The genetic architecture of maize flowering time.

Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, Lepak NK, Li H, Mitchell SE, Pressoir G, Peiffer JA, Rosas MO, Rocheford TR, Romay MC, Romero S, Salvo S, Sanchez Villeda H, da Silva HS, Sun Q, Tian F, Upadyayula N, Ware D, Yates H, Yu J, Zhang Z, Kresovich S, McMullen MD.

Science. 2009 Aug 7;325(5941):714-8. doi: 10.1126/science.1174276.

33.

Conventional screening overlooks resistance sources: rootworm damage of diverse inbred lines and their B73 hybrids is unrelated.

Flint-Garcia SA, Dashiell KE, Prischmann DA, Bohn MO, Hibbard BE.

J Econ Entomol. 2009 Jun;102(3):1317-24.

PMID:
19610453
34.

DNAAlignEditor: DNA alignment editor tool.

Sanchez-Villeda H, Schroeder S, Flint-Garcia S, Guill KE, Yamasaki M, McMullen MD.

BMC Bioinformatics. 2008 Mar 19;9:154. doi: 10.1186/1471-2105-9-154.

35.

Maize association population: a high-resolution platform for quantitative trait locus dissection.

Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES.

Plant J. 2005 Dec;44(6):1054-64.

36.

Structure of linkage disequilibrium in plants.

Flint-Garcia SA, Thornsberry JM, Buckler ES 4th.

Annu Rev Plant Biol. 2003;54:357-74. Review.

PMID:
14502995
37.

Phenotypic versus marker-assisted selection for stalk strength and second-generation European corn borer resistance in maize.

Flint-Garcia SA, Darrah LL, McMullen MD, Hibbard BE.

Theor Appl Genet. 2003 Nov;107(7):1331-6. Epub 2003 Aug 19.

PMID:
12928781
38.

Tissue-specific patterns of a maize Myb transcription factor are epigenetically regulated.

Cocciolone SM, Chopra S, Flint-Garcia SA, McMullen MD, Peterson T.

Plant J. 2001 Sep;27(5):467-78.

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