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Items: 1 to 50 of 248

1.

Repetitive Head Impacts in Youth Football: Description and Relationship to White Matter Structure.

Nilsson KJ, Flint HG, Gao Y, Kendrick L, Cutchin S, Pentecost R, Pardue K.

Sports Health. 2019 Nov/Dec;11(6):507-513. doi: 10.1177/1941738119865264. Epub 2019 Aug 21.

PMID:
31433735
2.

Heterologous gene expression in the human gut bacteria Eubacterium rectale and Roseburia inulinivorans by means of conjugative plasmids.

Sheridan PO, Martin JC, Minton NP, Flint HJ, O'Toole PW, Scott KP.

Anaerobe. 2019 Oct;59:131-140. doi: 10.1016/j.anaerobe.2019.06.008. Epub 2019 Jun 19.

PMID:
31228669
3.

Use of Continuous Dexmedetomidine at Home for Nearly Three Years in a Young Woman with End-Stage Cyanotic Congenital Heart Disease and Cyclic Vomiting.

Thienprayoon R, Meyer M, Flint H, Weidner N, Hirsch R.

J Palliat Med. 2019 Oct;22(10):1289-1292. doi: 10.1089/jpm.2018.0516. Epub 2019 May 6.

PMID:
31058565
4.

Mechanistic Insights Into the Cross-Feeding of Ruminococcus gnavus and Ruminococcus bromii on Host and Dietary Carbohydrates.

Crost EH, Le Gall G, Laverde-Gomez JA, Mukhopadhya I, Flint HJ, Juge N.

Front Microbiol. 2018 Nov 5;9:2558. doi: 10.3389/fmicb.2018.02558. eCollection 2018.

5.

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria.

Laverde Gomez JA, Mukhopadhya I, Duncan SH, Louis P, Shaw S, Collie-Duguid E, Crost E, Juge N, Flint HJ.

Environ Microbiol. 2019 Jan;21(1):259-271. doi: 10.1111/1462-2920.14454. Epub 2018 Nov 22.

6.

Dietary fibers inhibit obesity in mice, but host responses in the cecum and liver appear unrelated to fiber-specific changes in cecal bacterial taxonomic composition.

Drew JE, Reichardt N, Williams LM, Mayer CD, Walker AW, Farquharson AJ, Kastora S, Farquharson F, Milligan G, Morrison DJ, Preston T, Flint HJ, Louis P.

Sci Rep. 2018 Oct 22;8(1):15566. doi: 10.1038/s41598-018-34081-8.

7.

Impact of carbohydrate substrate complexity on the diversity of the human colonic microbiota.

Chung WSF, Walker AW, Vermeiren J, Sheridan PO, Bosscher D, Garcia-Campayo V, Parkhill J, Flint HJ, Duncan SH.

FEMS Microbiol Ecol. 2019 Jan 1;95(1). doi: 10.1093/femsec/fiy201.

8.

Economic Evaluation of Concussion Programs in the State of Idaho: The Collective Potential of Prevention and Clinical Care.

Bergeron S, Flint H, Hansen Z.

Popul Health Manag. 2019 Feb;22(1):32-39. doi: 10.1089/pop.2017.0204. Epub 2018 May 14.

PMID:
29757076
9.

Specific substrate-driven changes in human faecal microbiota composition contrast with functional redundancy in short-chain fatty acid production.

Reichardt N, Vollmer M, Holtrop G, Farquharson FM, Wefers D, Bunzel M, Duncan SH, Drew JE, Williams LM, Milligan G, Preston T, Morrison D, Flint HJ, Louis P.

ISME J. 2018 Feb;12(2):610-622. doi: 10.1038/ismej.2017.196. Epub 2017 Dec 1.

10.

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.

Mukhopadhya I, Moraïs S, Laverde-Gomez J, Sheridan PO, Walker AW, Kelly W, Klieve AV, Ouwerkerk D, Duncan SH, Louis P, Koropatkin N, Cockburn D, Kibler R, Cooper PJ, Sandoval C, Crost E, Juge N, Bayer EA, Flint HJ.

Environ Microbiol. 2018 Jan;20(1):324-336. doi: 10.1111/1462-2920.14000. Epub 2017 Dec 7.

11.

Prebiotic potential of pectin and pectic oligosaccharides to promote anti-inflammatory commensal bacteria in the human colon.

Chung WSF, Meijerink M, Zeuner B, Holck J, Louis P, Meyer AS, Wells JM, Flint HJ, Duncan SH.

FEMS Microbiol Ecol. 2017 Nov 1;93(11). doi: 10.1093/femsec/fix127.

PMID:
29029078
12.

Towards standards for human fecal sample processing in metagenomic studies.

Costea PI, Zeller G, Sunagawa S, Pelletier E, Alberti A, Levenez F, Tramontano M, Driessen M, Hercog R, Jung FE, Kultima JR, Hayward MR, Coelho LP, Allen-Vercoe E, Bertrand L, Blaut M, Brown JRM, Carton T, Cools-Portier S, Daigneault M, Derrien M, Druesne A, de Vos WM, Finlay BB, Flint HJ, Guarner F, Hattori M, Heilig H, Luna RA, van Hylckama Vlieg J, Junick J, Klymiuk I, Langella P, Le Chatelier E, Mai V, Manichanh C, Martin JC, Mery C, Morita H, O'Toole PW, Orvain C, Patil KR, Penders J, Persson S, Pons N, Popova M, Salonen A, Saulnier D, Scott KP, Singh B, Slezak K, Veiga P, Versalovic J, Zhao L, Zoetendal EG, Ehrlich SD, Dore J, Bork P.

Nat Biotechnol. 2017 Nov;35(11):1069-1076. doi: 10.1038/nbt.3960. Epub 2017 Oct 2.

PMID:
28967887
13.

Discovery of a novel lantibiotic nisin O from Blautia obeum A2-162, isolated from the human gastrointestinal tract.

Hatziioanou D, Gherghisan-Filip C, Saalbach G, Horn N, Wegmann U, Duncan SH, Flint HJ, Mayer MJ, Narbad A.

Microbiology. 2017 Sep;163(9):1292-1305. doi: 10.1099/mic.0.000515. Epub 2017 Aug 31.

14.

Oral treatment with Eubacterium hallii improves insulin sensitivity in db/db mice.

Udayappan S, Manneras-Holm L, Chaplin-Scott A, Belzer C, Herrema H, Dallinga-Thie GM, Duncan SH, Stroes ESG, Groen AK, Flint HJ, Backhed F, de Vos WM, Nieuwdorp M.

NPJ Biofilms Microbiomes. 2016 Jul 6;2:16009. doi: 10.1038/npjbiofilms.2016.9. eCollection 2016.

15.

The impact of nutrition on intestinal bacterial communities.

Flint HJ, Duncan SH, Louis P.

Curr Opin Microbiol. 2017 Aug;38:59-65. doi: 10.1016/j.mib.2017.04.005. Epub 2017 May 6. Review.

PMID:
28486162
16.

Complexity of the Ruminococcus flavefaciens FD-1 cellulosome reflects an expansion of family-related protein-protein interactions.

Israeli-Ruimy V, Bule P, Jindou S, Dassa B, Moraïs S, Borovok I, Barak Y, Slutzki M, Hamberg Y, Cardoso V, Alves VD, Najmudin S, White BA, Flint HJ, Gilbert HJ, Lamed R, Fontes CM, Bayer EA.

Sci Rep. 2017 Feb 10;7:42355. doi: 10.1038/srep42355.

17.

Formation of propionate and butyrate by the human colonic microbiota.

Louis P, Flint HJ.

Environ Microbiol. 2017 Jan;19(1):29-41. doi: 10.1111/1462-2920.13589. Epub 2016 Dec 8. Review.

PMID:
27928878
18.

Challenges in microbial ecology: building predictive understanding of community function and dynamics.

Widder S, Allen RJ, Pfeiffer T, Curtis TP, Wiuf C, Sloan WT, Cordero OX, Brown SP, Momeni B, Shou W, Kettle H, Flint HJ, Haas AF, Laroche B, Kreft JU, Rainey PB, Freilich S, Schuster S, Milferstedt K, van der Meer JR, Groβkopf T, Huisman J, Free A, Picioreanu C, Quince C, Klapper I, Labarthe S, Smets BF, Wang H; Isaac Newton Institute Fellows, Soyer OS.

ISME J. 2016 Nov;10(11):2557-2568. doi: 10.1038/ismej.2016.45. Epub 2016 Mar 29. Review.

19.

Lysozyme activity of the Ruminococcus champanellensis cellulosome.

Moraïs S, Cockburn DW, Ben-David Y, Koropatkin NM, Martens EC, Duncan SH, Flint HJ, Mizrahi I, Bayer EA.

Environ Microbiol. 2016 Dec;18(12):5112-5122. doi: 10.1111/1462-2920.13501. Epub 2016 Sep 7.

20.

How to Manipulate the Microbiota: Prebiotics.

Louis P, Flint HJ, Michel C.

Adv Exp Med Biol. 2016;902:119-42. doi: 10.1007/978-3-319-31248-4_9. Review.

PMID:
27161355
21.

Gut microbial metabolites in health and disease.

Flint HJ.

Gut Microbes. 2016 May 3;7(3):187-8. doi: 10.1080/19490976.2016.1182295. No abstract available.

22.

Editorial: further evidence that proton pump inhibitors may impact on the gut microbiota.

Walker AW, Flint HJ.

Aliment Pharmacol Ther. 2016 May;43(10):1104-5. doi: 10.1111/apt.13596. No abstract available.

23.

Objections to the proposed reclassification of Eubacterium rectale as Agathobacter rectalis.

Sheridan PO, Duncan SH, Walker AW, Scott KP, Louis P, Flint HJ.

Int J Syst Evol Microbiol. 2016 May;66(5):2106. doi: 10.1099/ijsem.0.000969. Epub 2016 Feb 24. No abstract available.

PMID:
26916277
24.

Modulation of the human gut microbiota by dietary fibres occurs at the species level.

Chung WS, Walker AW, Louis P, Parkhill J, Vermeiren J, Bosscher D, Duncan SH, Flint HJ.

BMC Biol. 2016 Jan 11;14:3. doi: 10.1186/s12915-015-0224-3.

25.

Faecalibacterium prausnitzii A2-165 has a high capacity to induce IL-10 in human and murine dendritic cells and modulates T cell responses.

Rossi O, van Berkel LA, Chain F, Tanweer Khan M, Taverne N, Sokol H, Duncan SH, Flint HJ, Harmsen HJ, Langella P, Samsom JN, Wells JM.

Sci Rep. 2016 Jan 4;6:18507. doi: 10.1038/srep18507.

26.

Wheat bran promotes enrichment within the human colonic microbiota of butyrate-producing bacteria that release ferulic acid.

Duncan SH, Russell WR, Quartieri A, Rossi M, Parkhill J, Walker AW, Flint HJ.

Environ Microbiol. 2016 Jul;18(7):2214-25. doi: 10.1111/1462-2920.13158. Epub 2016 Jan 21.

27.

Discussing Serious News.

Flint H, Meyer M, Hossain M, Klein M.

Am J Hosp Palliat Care. 2017 Apr;34(3):254-257. doi: 10.1177/1049909115617140. Epub 2016 Jul 11.

PMID:
26602316
28.

Changes in the Abundance of Faecalibacterium prausnitzii Phylogroups I and II in the Intestinal Mucosa of Inflammatory Bowel Disease and Patients with Colorectal Cancer.

Lopez-Siles M, Martinez-Medina M, Surís-Valls R, Aldeguer X, Sabat-Mir M, Duncan SH, Flint HJ, Garcia-Gil LJ.

Inflamm Bowel Dis. 2016 Jan;22(1):28-41. doi: 10.1097/MIB.0000000000000590.

PMID:
26595550
29.

Complete Genome Sequence of the Human Gut Symbiont Roseburia hominis.

Travis AJ, Kelly D, Flint HJ, Aminov RI.

Genome Announc. 2015 Nov 5;3(6). pii: e01286-15. doi: 10.1128/genomeA.01286-15.

30.

Enhanced butyrate formation by cross-feeding between Faecalibacterium prausnitzii and Bifidobacterium adolescentis.

Rios-Covian D, Gueimonde M, Duncan SH, Flint HJ, de los Reyes-Gavilan CG.

FEMS Microbiol Lett. 2015 Nov;362(21). pii: fnv176. doi: 10.1093/femsle/fnv176. Epub 2015 Sep 28.

PMID:
26420851
31.

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii.

Ze X, Ben David Y, Laverde-Gomez JA, Dassa B, Sheridan PO, Duncan SH, Louis P, Henrissat B, Juge N, Koropatkin NM, Bayer EA, Flint HJ.

MBio. 2015 Sep 29;6(5):e01058-15. doi: 10.1128/mBio.01058-15.

32.

Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, Ruminococcus champanellensis, reveals a fine-tuned system for cohesin-dockerin recognition.

Moraïs S, Ben David Y, Bensoussan L, Duncan SH, Koropatkin NM, Martens EC, Flint HJ, Bayer EA.

Environ Microbiol. 2016 Feb;18(2):542-56. doi: 10.1111/1462-2920.13047. Epub 2015 Oct 14.

33.

Mucosa-associated Faecalibacterium prausnitzii phylotype richness is reduced in patients with inflammatory bowel disease.

Lopez-Siles M, Martinez-Medina M, Abellà C, Busquets D, Sabat-Mir M, Duncan SH, Aldeguer X, Flint HJ, Garcia-Gil LJ.

Appl Environ Microbiol. 2015 Nov;81(21):7582-92. doi: 10.1128/AEM.02006-15. Epub 2015 Aug 21.

34.

16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice.

Walker AW, Martin JC, Scott P, Parkhill J, Flint HJ, Scott KP.

Microbiome. 2015 Jun 22;3:26. doi: 10.1186/s40168-015-0087-4. eCollection 2015.

35.

Faecalibacterium prausnitzii Strain HTF-F and Its Extracellular Polymeric Matrix Attenuate Clinical Parameters in DSS-Induced Colitis.

Rossi O, Khan MT, Schwarzer M, Hudcovic T, Srutkova D, Duncan SH, Stolte EH, Kozakova H, Flint HJ, Samsom JN, Harmsen HJ, Wells JM.

PLoS One. 2015 Apr 24;10(4):e0123013. doi: 10.1371/journal.pone.0123013. eCollection 2015.

36.

Syringyl lignin production in conifers: Proof of concept in a Pine tracheary element system.

Wagner A, Tobimatsu Y, Phillips L, Flint H, Geddes B, Lu F, Ralph J.

Proc Natl Acad Sci U S A. 2015 May 12;112(19):6218-23. doi: 10.1073/pnas.1411926112. Epub 2015 Apr 20.

37.

Ruminococcal cellulosome systems from rumen to human.

Ben David Y, Dassa B, Borovok I, Lamed R, Koropatkin NM, Martens EC, White BA, Bernalier-Donadille A, Duncan SH, Flint HJ, Bayer EA, Moraïs S.

Environ Microbiol. 2015 Sep;17(9):3407-26. doi: 10.1111/1462-2920.12868. Epub 2015 May 7.

38.

Functional phylotyping approach for assessing intraspecific diversity of Ruminococcus albus within the rumen microbiome.

Rozman Grinberg I, Yin G, Borovok I, Berg Miller ME, Yeoman CJ, Dassa B, Yu Z, Mizrahi I, Flint HJ, Bayer EA, White BA, Lamed R.

FEMS Microbiol Lett. 2015 Jan;362(3):1-10. doi: 10.1093/femsle/fnu047. Epub 2014 Dec 22.

39.

Contribution of diet to the composition of the human gut microbiota.

Graf D, Di Cagno R, Fåk F, Flint HJ, Nyman M, Saarela M, Watzl B.

Microb Ecol Health Dis. 2015 Feb 4;26:26164. doi: 10.3402/mehd.v26.26164. eCollection 2015.

40.

Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production.

Wu GD, Compher C, Chen EZ, Smith SA, Shah RD, Bittinger K, Chehoud C, Albenberg LG, Nessel L, Gilroy E, Star J, Weljie AM, Flint HJ, Metz DC, Bennett MJ, Li H, Bushman FD, Lewis JD.

Gut. 2016 Jan;65(1):63-72. doi: 10.1136/gutjnl-2014-308209. Epub 2014 Nov 26.

41.

Links between diet, gut microbiota composition and gut metabolism.

Flint HJ, Duncan SH, Scott KP, Louis P.

Proc Nutr Soc. 2015 Feb;74(1):13-22. doi: 10.1017/S0029665114001463. Epub 2014 Sep 30.

PMID:
25268552
42.

The gut microbiota, bacterial metabolites and colorectal cancer.

Louis P, Hold GL, Flint HJ.

Nat Rev Microbiol. 2014 Oct;12(10):661-72. doi: 10.1038/nrmicro3344. Epub 2014 Sep 8. Review.

PMID:
25198138
43.

Modelling the emergent dynamics and major metabolites of the human colonic microbiota.

Kettle H, Louis P, Holtrop G, Duncan SH, Flint HJ.

Environ Microbiol. 2015 May;17(5):1615-30. doi: 10.1111/1462-2920.12599. Epub 2014 Oct 7.

44.

Biomass utilization by gut microbiomes.

White BA, Lamed R, Bayer EA, Flint HJ.

Annu Rev Microbiol. 2014;68:279-96. doi: 10.1146/annurev-micro-092412-155618. Epub 2014 Jun 16. Review.

PMID:
25002092
45.

Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

Dassa B, Borovok I, Ruimy-Israeli V, Lamed R, Flint HJ, Duncan SH, Henrissat B, Coutinho P, Morrison M, Mosoni P, Yeoman CJ, White BA, Bayer EA.

PLoS One. 2014 Jul 3;9(7):e99221. doi: 10.1371/journal.pone.0099221. eCollection 2014.

46.

Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic.

Hill C, Guarner F, Reid G, Gibson GR, Merenstein DJ, Pot B, Morelli L, Canani RB, Flint HJ, Salminen S, Calder PC, Sanders ME.

Nat Rev Gastroenterol Hepatol. 2014 Aug;11(8):506-14. doi: 10.1038/nrgastro.2014.66. Epub 2014 Jun 10.

PMID:
24912386
47.

Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men.

Salonen A, Lahti L, Salojärvi J, Holtrop G, Korpela K, Duncan SH, Date P, Farquharson F, Johnstone AM, Lobley GE, Louis P, Flint HJ, de Vos WM.

ISME J. 2014 Nov;8(11):2218-30. doi: 10.1038/ismej.2014.63. Epub 2014 Apr 24.

48.

Mucosa-associated Faecalibacterium prausnitzii and Escherichia coli co-abundance can distinguish Irritable Bowel Syndrome and Inflammatory Bowel Disease phenotypes.

Lopez-Siles M, Martinez-Medina M, Busquets D, Sabat-Mir M, Duncan SH, Flint HJ, Aldeguer X, Garcia-Gil LJ.

Int J Med Microbiol. 2014 May;304(3-4):464-75. doi: 10.1016/j.ijmm.2014.02.009. Epub 2014 Feb 21.

PMID:
24713205
49.

Phylogeny, culturing, and metagenomics of the human gut microbiota.

Walker AW, Duncan SH, Louis P, Flint HJ.

Trends Microbiol. 2014 May;22(5):267-74. doi: 10.1016/j.tim.2014.03.001. Epub 2014 Mar 31. Review.

PMID:
24698744
50.

Gut microbiota signatures predict host and microbiota responses to dietary interventions in obese individuals.

Korpela K, Flint HJ, Johnstone AM, Lappi J, Poutanen K, Dewulf E, Delzenne N, de Vos WM, Salonen A.

PLoS One. 2014 Mar 6;9(6):e90702. doi: 10.1371/journal.pone.0090702. eCollection 2014.

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