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Items: 1 to 50 of 864

1.

Insights into the transcriptomic response of the plant engineering bacterium Ensifer adhaerens OV14 during transformation.

Zuniga-Soto E, Fitzpatrick DA, Doohan FM, Mullins E.

Sci Rep. 2019 Jul 17;9(1):10344. doi: 10.1038/s41598-019-44648-8.

2.

Pangloss: A Tool for Pan-Genome Analysis of Microbial Eukaryotes.

McCarthy CGP, Fitzpatrick DA.

Genes (Basel). 2019 Jul 10;10(7). pii: E521. doi: 10.3390/genes10070521.

3.

Clinically-relevant postzygotic mosaicism in parents and children with developmental disorders in trio exome sequencing data.

Wright CF, Prigmore E, Rajan D, Handsaker J, McRae J, Kaplanis J, Fitzgerald TW, FitzPatrick DR, Firth HV, Hurles ME.

Nat Commun. 2019 Jul 5;10(1):2985. doi: 10.1038/s41467-019-11059-2.

4.

The freshwater isopod Asellus aquaticus as a model biomonitor of environmental pollution: A review.

O'Callaghan I, Harrison S, Fitzpatrick D, Sullivan T.

Chemosphere. 2019 Jun 28;235:498-509. doi: 10.1016/j.chemosphere.2019.06.217. [Epub ahead of print] Review.

PMID:
31276864
5.

Glioblastoma Multiforme in the over 70's: "To treat or not to treat with radiotherapy?"

Glynn AM, Rangaswamy G, O'Shea J, Dunne M, Grogan R, MacNally S, Fitzpatrick D, Faul C.

Cancer Med. 2019 Jul 4. doi: 10.1002/cam4.2398. [Epub ahead of print]

6.

PCR-Based Bloodmeal Analysis of Aedes aegypti and Culex quinquefasciatus (Diptera: Culicidae) in St. George Parish, Grenada.

Fitzpatrick DM, Hattaway LM, Hsueh AN, Ramos-Niño ME, Cheetham SM.

J Med Entomol. 2019 Jun 27;56(4):1170-1175. doi: 10.1093/jme/tjz037.

7.

Identification of Helminth Parasites from Selar crumenophthalmus in Grenada, West Indies.

Dundas NS, Fitzpatrick DM, McKIBBEN JS, Amadi VA, Pinckney RD.

J Food Prot. 2019 Jul;82(7):1244-1248. doi: 10.4315/0362-028X.JFP-18-470.

PMID:
31237789
8.

Exome-wide assessment of the functional impact and pathogenicity of multinucleotide mutations.

Kaplanis J, Akawi N, Gallone G, McRae JF, Prigmore E, Wright CF, Fitzpatrick DR, Firth HV, Barrett JC, Hurles ME; Deciphering Developmental Disorders study.

Genome Res. 2019 Jul;29(7):1047-1056. doi: 10.1101/gr.239756.118. Epub 2019 Jun 21.

9.

Publisher Correction: BRD4 interacts with NIPBL and BRD4 is mutated in a Cornelia de Lange-like syndrome.

Olley G, Ansari M, Bengani H, Grimes GR, Rhodes J, von Kriegsheim A, Blatnik A, Stewart FJ, Wakeling E, Carroll N, Ross A, Park SM; Deciphering Developmental Disorders Study, Bickmore WA, Pradeepa MM, FitzPatrick DR.

Nat Genet. 2019 Jul;51(7):1192. doi: 10.1038/s41588-019-0448-1.

PMID:
31168063
10.

Flexible and scalable diagnostic filtering of genomic variants using G2P with Ensembl VEP.

Thormann A, Halachev M, McLaren W, Moore DJ, Svinti V, Campbell A, Kerr SM, Tischkowitz M, Hunt SE, Dunlop MG, Hurles ME, Wright CF, Firth HV, Cunningham F, FitzPatrick DR.

Nat Commun. 2019 May 30;10(1):2373. doi: 10.1038/s41467-019-10016-3.

11.

Gastric perforation through a hiatus hernia into the left lung in an 84-year-old woman.

Fitzpatrick D, Longondjo M.

BMJ Case Rep. 2019 May 14;12(5). pii: e227956. doi: 10.1136/bcr-2018-227956.

PMID:
31092492
12.

Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa.

Bayram ÖS, Dettmann A, Karahoda B, Moloney NM, Ormsby T, McGowan J, Cea-Sánchez S, Miralles-Durán A, Brancini GTP, Luque EM, Fitzpatrick DA, Cánovas D, Corrochano LM, Doyle S, Selker EU, Seiler S, Bayram Ö.

Genetics. 2019 Jul;212(3):691-710. doi: 10.1534/genetics.119.302277. Epub 2019 May 8.

PMID:
31068340
13.

Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.

Waldron R, McGowan J, Gordon N, McCarthy C, Mitchell EB, Fitzpatrick DA.

PLoS One. 2019 May 1;14(5):e0216171. doi: 10.1371/journal.pone.0216171. eCollection 2019.

14.

Hair cell and neural contributions to the cochlear summating potential.

Pappa AK, Hutson KA, Scott WC, Wilson JD, Fox KE, Masood MM, Giardina CK, Pulver SH, Grana GD, Askew C, Fitzpatrick DC.

J Neurophysiol. 2019 Jun 1;121(6):2163-2180. doi: 10.1152/jn.00006.2019. Epub 2019 Apr 3.

PMID:
30943095
15.

Epidemiology of emergency ambulance service calls related to mental health problems and self harm: a national record linkage study.

Duncan EAS, Best C, Dougall N, Skar S, Evans J, Corfield AR, Fitzpatrick D, Goldie I, Maxwell M, Snooks H, Stark C, White C, Wojcik W.

Scand J Trauma Resusc Emerg Med. 2019 Mar 20;27(1):34. doi: 10.1186/s13049-019-0611-9.

16.

ITPase deficiency causes a Martsolf-like syndrome with a lethal infantile dilated cardiomyopathy.

Handley MT, Reddy K, Wills J, Rosser E, Kamath A, Halachev M, Falkous G, Williams D, Cox P, Meynert A, Raymond ES, Morrison H, Brown S, Allan E, Aligianis I, Jackson AP, Ramsahoye BH, von Kriegsheim A, Taylor RW, Finch AJ, FitzPatrick DR.

PLoS Genet. 2019 Mar 11;15(3):e1007605. doi: 10.1371/journal.pgen.1007605. eCollection 2019 Mar.

17.

NAA10 polyadenylation signal variants cause syndromic microphthalmia.

Johnston JJ, Williamson KA, Chou CM, Sapp JC, Ansari M, Chapman HM, Cooper DN, Dabir T, Dudley JN, Holt RJ, Ragge NK, Schäffer AA, Sen SK, Slavotinek AM, FitzPatrick DR, Glaser TM, Stewart F, Black GC, Biesecker LG.

J Med Genet. 2019 Jul;56(7):444-452. doi: 10.1136/jmedgenet-2018-105836. Epub 2019 Mar 6.

PMID:
30842225
18.

Author Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Quiroz FJU, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2019 Apr;16(4):351. doi: 10.1038/s41592-019-0363-5.

PMID:
30820033
19.

A Case of Overlap Posterior Cortical Atrophy and Logopenic Variant Primary Progressive Aphasia.

Fitzpatrick D, Blanco-Campal A, Kyne L.

Neurologist. 2019 Mar;24(2):62-65. doi: 10.1097/NRL.0000000000000225.

PMID:
30817493
20.

The sound of salts by Broadband Acoustic Resonance Dissolution Spectroscopy.

van Ruth S, Dekker P, Brouwer E, Rozijn M, Erasmus S, Fitzpatrick D.

Food Res Int. 2019 Feb;116:1047-1058. doi: 10.1016/j.foodres.2018.09.044. Epub 2018 Sep 24.

21.

Pan-genome analyses of model fungal species.

McCarthy CGP, Fitzpatrick DA.

Microb Genom. 2019 Feb;5(2). doi: 10.1099/mgen.0.000243. Epub 2019 Feb 4.

22.

The Magical Horizontal Force Muscle? A Preliminary Study Examining the "Force-Vector" Theory.

Fitzpatrick DA, Cimadoro G, Cleather DJ.

Sports (Basel). 2019 Jan 22;7(2). pii: E30. doi: 10.3390/sports7020030.

23.

High-sensitivity troponin T in marathon runners, marathon runners with heart disease and collapsed marathon runners.

Leckie T, Richardson A, Watkins E, Fitzpatrick D, Galloway R, Grimaldi R, Roberts A, Baker P.

Scand J Med Sci Sports. 2019 May;29(5):663-668. doi: 10.1111/sms.13392. Epub 2019 Feb 17.

PMID:
30664255
24.

Functional Synaptic Architecture of Callosal Inputs in Mouse Primary Visual Cortex.

Lee KS, Vandemark K, Mezey D, Shultz N, Fitzpatrick D.

Neuron. 2019 Feb 6;101(3):421-428.e5. doi: 10.1016/j.neuron.2018.12.005. Epub 2019 Jan 15.

PMID:
30658859
25.

Caffeine Intake Habits and the Perception of Its Effects on Health Among College Students.

Bucher J, Fitzpatrick D, Swanson AG, Abraham SP.

Health Care Manag (Frederick). 2019 Jan/Mar;38(1):44-49. doi: 10.1097/HCM.0000000000000240.

PMID:
30640237
26.

Publisher Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Urra Quiroz FJ, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2019 Feb;16(2):206. doi: 10.1038/s41592-018-0300-z.

PMID:
30602783
27.

Evolutionary, structural and functional analysis of the caleosin/peroxygenase gene family in the Fungi.

Rahman F, Hassan M, Hanano A, Fitzpatrick DA, McCarthy CGP, Murphy DJ.

BMC Genomics. 2018 Dec 28;19(1):976. doi: 10.1186/s12864-018-5334-1.

28.

Pathogenicity and selective constraint on variation near splice sites.

Lord J, Gallone G, Short PJ, McRae JF, Ironfield H, Wynn EH, Gerety SS, He L, Kerr B, Johnson DS, McCann E, Kinning E, Flinter F, Temple IK, Clayton-Smith J, McEntagart M, Lynch SA, Joss S, Douzgou S, Dabir T, Clowes V, McConnell VPM, Lam W, Wright CF, FitzPatrick DR, Firth HV, Barrett JC, Hurles ME; Deciphering Developmental Disorders study.

Genome Res. 2019 Feb;29(2):159-170. doi: 10.1101/gr.238444.118. Epub 2018 Dec 26.

29.

Correction: Loss of the BMP Antagonist, SMOC-1, Causes Ophthalmo-Acromelic (Waardenburg Anophthalmia) Syndrome in Humans and Mice.

Rainger J, van Beusekom E, Ramsay JK, McKie L, Al-Gazali L, Pallotta R, Saponari A, Branney P, Fisher M, Morrison H, Bicknell L, Gautier P, Perry P, Sokhi K, Sexton D, Bardakjian TM, Schneider AS, Elcioglu N, Ozkinay F, Koenig R, Mégarbané A, Semerci CN, Khan A, Zafar S, Hennekam R, Sousa SB, Ramos L, Garavelli L, Furga AS, Wischmeijer A, Jackson IJ, Gillessen-Kaesbach G, Brunner HG, Wieczorek D, van Bokhoven H, FitzPatrick DR.

PLoS Genet. 2018 Dec 26;14(12):e1007866. doi: 10.1371/journal.pgen.1007866. eCollection 2018 Dec.

30.

Comparative Analysis of Oomycete Genome Evolution Using the Oomycete Gene Order Browser (OGOB).

McGowan J, Byrne KP, Fitzpatrick DA.

Genome Biol Evol. 2019 Jan 1;11(1):189-206. doi: 10.1093/gbe/evy267.

31.

Quantifying the contribution of recessive coding variation to developmental disorders.

Martin HC, Jones WD, McIntyre R, Sanchez-Andrade G, Sanderson M, Stephenson JD, Jones CP, Handsaker J, Gallone G, Bruntraeger M, McRae JF, Prigmore E, Short P, Niemi M, Kaplanis J, Radford EJ, Akawi N, Balasubramanian M, Dean J, Horton R, Hulbert A, Johnson DS, Johnson K, Kumar D, Lynch SA, Mehta SG, Morton J, Parker MJ, Splitt M, Turnpenny PD, Vasudevan PC, Wright M, Bassett A, Gerety SS, Wright CF, FitzPatrick DR, Firth HV, Hurles ME, Barrett JC; Deciphering Developmental Disorders Study.

Science. 2018 Dec 7;362(6419):1161-1164. doi: 10.1126/science.aar6731. Epub 2018 Nov 8.

PMID:
30409806
32.

High frequency transient-evoked otoacoustic emission measurements using chirp and click stimuli.

Keefe DH, Feeney MP, Hunter LL, Fitzpatrick DF, Blankenship CM, Garinis AC, Putterman DB, Wróblewski M.

Hear Res. 2019 Jan;371:117-139. doi: 10.1016/j.heares.2018.09.010. Epub 2018 Oct 18.

PMID:
30409510
33.

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Quiroz FJU, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2018 Nov;15(11):936-939. doi: 10.1038/s41592-018-0171-3. Epub 2018 Oct 30. Erratum in: Nat Methods. 2019 Feb;16(2):206. Nat Methods. 2019 Feb 28;:.

34.

Structuring Diabetes Mellitus Care in Long-Term Nursing Home Residents.

Fitzpatrick D, Ibrahim ES, Kennelly S, Sherlock M, O'Neill D.

Ir Med J. 2018 Mar 14;111(3):711.

PMID:
30376229
35.

Distributed network interactions and their emergence in developing neocortex.

Smith GB, Hein B, Whitney DE, Fitzpatrick D, Kaschube M.

Nat Neurosci. 2018 Nov;21(11):1600-1608. doi: 10.1038/s41593-018-0247-5. Epub 2018 Oct 22.

36.

Evaluation of a device to improve non-coring needle insertion into implanted intravenous ports.

Barton A, Pamment K, Fitzpatrick D.

Br J Nurs. 2018 Oct 18;27(19):S20-S24. doi: 10.12968/bjon.2018.27.19.S20.

PMID:
30346809
37.

Intracochlear Electrocochleography: Response Patterns During Cochlear Implantation and Hearing Preservation.

Giardina CK, Brown KD, Adunka OF, Buchman CA, Hutson KA, Pillsbury HC, Fitzpatrick DC.

Ear Hear. 2019 Jul/Aug;40(4):833-848. doi: 10.1097/AUD.0000000000000659.

PMID:
30335669
38.

Across-the-World Automated Optimization and Continuous-Flow Synthesis of Pharmaceutical Agents Operating Through a Cloud-Based Server.

Fitzpatrick DE, Maujean T, Evans AC, Ley SV.

Angew Chem Int Ed Engl. 2018 Nov 12;57(46):15128-15132. doi: 10.1002/anie.201809080. Epub 2018 Oct 24.

39.

Common genetic variants contribute to risk of rare severe neurodevelopmental disorders.

Niemi MEK, Martin HC, Rice DL, Gallone G, Gordon S, Kelemen M, McAloney K, McRae J, Radford EJ, Yu S, Gecz J, Martin NG, Wright CF, Fitzpatrick DR, Firth HV, Hurles ME, Barrett JC.

Nature. 2018 Oct;562(7726):268-271. doi: 10.1038/s41586-018-0566-4. Epub 2018 Sep 26.

PMID:
30258228
40.

The genetic architecture of aniridia and Gillespie syndrome.

Hall HN, Williamson KA, FitzPatrick DR.

Hum Genet. 2018 Sep 22. doi: 10.1007/s00439-018-1934-8. [Epub ahead of print] Review.

PMID:
30242502
41.

Oxygen exposures at NASA's Neutral Buoyancy Lab: a 20-year experience.

Walker SC, Garbino A, Ray K, Hardwick R, Fitzpatrick DT, Sanders RW.

Undersea Hyperb Med. 2018 Jul-Aug;45(4):427-436.

PMID:
30241122
42.

The involvement of the low-oxygen-activated locus of Burkholderia cenocepacia in adaptation during cystic fibrosis infection.

Cullen L, O'Connor A, McCormack S, Owens RA, Holt GS, Collins C, Callaghan M, Doyle S, Smith D, Schaffer K, Fitzpatrick DA, McClean S.

Sci Rep. 2018 Sep 6;8(1):13386. doi: 10.1038/s41598-018-31556-6.

43.

Residual Cochlear Function in Adults and Children Receiving Cochlear Implants: Correlations With Speech Perception Outcomes.

Fontenot TE, Giardina CK, Dillon M, Rooth MA, Teagle HF, Park LR, Brown KD, Adunka OF, Buchman CA, Pillsbury HC, Fitzpatrick DC.

Ear Hear. 2019 May/Jun;40(3):577-591. doi: 10.1097/AUD.0000000000000630. Erratum in: Ear Hear. 2019 Jul/Aug;40(4):1034.

PMID:
30169463
44.

Circadian clock protein BMAL1 regulates IL-1β in macrophages via NRF2.

Early JO, Menon D, Wyse CA, Cervantes-Silva MP, Zaslona Z, Carroll RG, Palsson-McDermott EM, Angiari S, Ryan DG, Corcoran SE, Timmons G, Geiger SS, Fitzpatrick DJ, O'Connell D, Xavier RJ, Hokamp K, O'Neill LAJ, Curtis AM.

Proc Natl Acad Sci U S A. 2018 Sep 4;115(36):E8460-E8468. doi: 10.1073/pnas.1800431115. Epub 2018 Aug 20.

45.

Differential tuning of excitation and inhibition shapes direction selectivity in ferret visual cortex.

Wilson DE, Scholl B, Fitzpatrick D.

Nature. 2018 Aug;560(7716):97-101. doi: 10.1038/s41586-018-0354-1. Epub 2018 Jul 25.

PMID:
30046106
46.

Stereotactic radiosurgery to surgical cavity post resection of brain metastases: Local recurrence and overall survival rates. A single-centre experience.

Higgins MJ, Burke O, Fitzpatrick D, Nugent KG, Skourou C, Dunne M, Javadpour M, Faul C.

J Med Imaging Radiat Oncol. 2018 Oct;62(5):726-733. doi: 10.1111/1754-9485.12777. Epub 2018 Jul 25.

PMID:
30044047
47.

The effect of entomopathogenic fungal culture filtrate on the immune response and haemolymph proteome of the large pine weevil, Hylobius abietis.

Namara LM, Griffin CT, Fitzpatrick D, Kavanagh K, Carolan JC.

Insect Biochem Mol Biol. 2018 Oct;101:1-13. doi: 10.1016/j.ibmb.2018.07.001. Epub 2018 Jul 17.

PMID:
30026094
48.

Diagnosis and management of Cornelia de Lange syndrome: first international consensus statement.

Kline AD, Moss JF, Selicorni A, Bisgaard AM, Deardorff MA, Gillett PM, Ishman SL, Kerr LM, Levin AV, Mulder PA, Ramos FJ, Wierzba J, Ajmone PF, Axtell D, Blagowidow N, Cereda A, Costantino A, Cormier-Daire V, FitzPatrick D, Grados M, Groves L, Guthrie W, Huisman S, Kaiser FJ, Koekkoek G, Levis M, Mariani M, McCleery JP, Menke LA, Metrena A, O'Connor J, Oliver C, Pie J, Piening S, Potter CJ, Quaglio AL, Redeker E, Richman D, Rigamonti C, Shi A, Tümer Z, Van Balkom IDC, Hennekam RC.

Nat Rev Genet. 2018 Oct;19(10):649-666. doi: 10.1038/s41576-018-0031-0. Review.

PMID:
29995837
49.

Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade.

O'Brien CE, McCarthy CGP, Walshe AE, Shaw DR, Sumski DA, Krassowski T, Fitzpatrick DA, Butler G.

PLoS One. 2018 Jun 26;13(6):e0198957. doi: 10.1371/journal.pone.0198957. eCollection 2018.

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