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Items: 45

1.

The Makorin lep-2 and the lncRNA lep-5 regulate lin-28 to schedule sexual maturation of the C. elegans nervous system.

Lawson H, Vuong E, Miller RM, Kiontke K, Fitch DH, Portman DS.

Elife. 2019 Jul 2;8. pii: e43660. doi: 10.7554/eLife.43660.

2.

The Long Non-Coding RNA lep-5 Promotes the Juvenile-to-Adult Transition by Destabilizing LIN-28.

Kiontke KC, Herrera RA, Vuong E, Luo J, Schwarz EM, Fitch DHA, Portman DS.

Dev Cell. 2019 May 20;49(4):542-555.e9. doi: 10.1016/j.devcel.2019.03.003. Epub 2019 Apr 4.

PMID:
30956008
3.

From "the Worm" to "the Worms" and Back Again: The Evolutionary Developmental Biology of Nematodes.

Haag ES, Fitch DHA, Delattre M.

Genetics. 2018 Oct;210(2):397-433. doi: 10.1534/genetics.118.300243. Review.

4.

Genome Architecture and Evolution of a Unichromosomal Asexual Nematode.

Fradin H, Kiontke K, Zegar C, Gutwein M, Lucas J, Kovtun M, Corcoran DL, Baugh LR, Fitch DHA, Piano F, Gunsalus KC.

Curr Biol. 2017 Oct 9;27(19):2928-2939.e6. doi: 10.1016/j.cub.2017.08.038. Epub 2017 Sep 21.

5.

Makorin ortholog LEP-2 regulates LIN-28 stability to promote the juvenile-to-adult transition in Caenorhabditis elegans.

Herrera RA, Kiontke K, Fitch DH.

Development. 2016 Mar 1;143(5):799-809. doi: 10.1242/dev.132738. Epub 2016 Jan 25.

6.

Comparative validation of the D. melanogaster modENCODE transcriptome annotation.

Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, Clough E, Dasgupta A, Gubbala S, Han Y, Jayaseelan JC, Kalra D, Kim YA, Kovar CL, Lee SL, Li M, Malley JD, Malone JH, Mathew T, Mattiuzzo NR, Munidasa M, Muzny DM, Ongeri F, Perales L, Przytycka TM, Pu LL, Robinson G, Thornton RL, Saada N, Scherer SE, Smith HE, Vinson C, Warner CB, Worley KC, Wu YQ, Zou X, Cherbas P, Kellis M, Eisen MB, Piano F, Kionte K, Fitch DH, Sternberg PW, Cutter AD, Duff MO, Hoskins RA, Graveley BR, Gibbs RA, Bickel PJ, Kopp A, Carninci P, Celniker SE, Oliver B, Richards S.

Genome Res. 2014 Jul;24(7):1209-23. doi: 10.1101/gr.159384.113.

7.

Nematodes.

Kiontke K, Fitch DH.

Curr Biol. 2013 Oct 7;23(19):R862-4. doi: 10.1016/j.cub.2013.08.009. No abstract available.

8.

A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits.

Kiontke KC, Félix MA, Ailion M, Rockman MV, Braendle C, Pénigault JB, Fitch DH.

BMC Evol Biol. 2011 Nov 21;11:339. doi: 10.1186/1471-2148-11-339.

9.

Overlap extension PCR: an efficient method for transgene construction.

Nelson MD, Fitch DH.

Methods Mol Biol. 2011;772:459-70. doi: 10.1007/978-1-61779-228-1_27.

PMID:
22065455
10.

Evolution.

Fitch DHA, Kelley Thomas W.

In: Riddle DL, Blumenthal T, Meyer BJ, Priess JR, editors. C. elegans II. 2nd edition. Cold Spring Harbor (NY): Cold Spring Harbor Laboratory Press; 1997. No abstract available. Chapter 29.

11.

A bow-tie genetic architecture for morphogenesis suggested by a genome-wide RNAi screen in Caenorhabditis elegans.

Nelson MD, Zhou E, Kiontke K, Fradin H, Maldonado G, Martin D, Shah K, Fitch DH.

PLoS Genet. 2011 Mar;7(3):e1002010. doi: 10.1371/journal.pgen.1002010. Epub 2011 Mar 3.

12.

Phenotypic plasticity: different teeth for different feasts.

Kiontke K, Fitch DH.

Curr Biol. 2010 Sep 14;20(17):R710-2. doi: 10.1016/j.cub.2010.07.009.

13.

Evolution of early embryogenesis in rhabditid nematodes.

Brauchle M, Kiontke K, MacMenamin P, Fitch DH, Piano F.

Dev Biol. 2009 Nov 1;335(1):253-62. doi: 10.1016/j.ydbio.2009.07.033. Epub 2009 Jul 28.

14.

Dropout alignment allows homology recognition and evolutionary analysis of rDNA intergenic spacers.

Ryu S, Do Y, Fitch DH, Kim W, Mishra B.

J Mol Evol. 2008 Apr;66(4):368-83. doi: 10.1007/s00239-008-9090-8. Epub 2008 Mar 25.

PMID:
18363028
15.

Introduction to nematode evolution and ecology.

Fitch DH.

WormBook. 2005 Aug 31:1-8. Review. No abstract available.

16.

The phylogenetic relationships of Caenorhabditis and other rhabditids.

Kiontke K, Fitch DH.

WormBook. 2005 Aug 11:1-11. Review.

17.

Trends, stasis, and drift in the evolution of nematode vulva development.

Kiontke K, Barrière A, Kolotuev I, Podbilewicz B, Sommer R, Fitch DH, Félix MA.

Curr Biol. 2007 Nov 20;17(22):1925-37.

18.

Caenorhabditis evolution: if they all look alike, you aren't looking hard enough.

Haag ES, Chamberlin H, Coghlan A, Fitch DH, Peters AD, Schulenburg H.

Trends Genet. 2007 Mar;23(3):101-4. Epub 2007 Feb 1.

PMID:
17275130
19.

Novel gain-of-function alleles demonstrate a role for the heterochronic gene lin-41 in C. elegans male tail tip morphogenesis.

Del Rio-Albrechtsen T, Kiontke K, Chiou SY, Fitch DH.

Dev Biol. 2006 Sep 1;297(1):74-86. Epub 2006 May 6.

20.

Evolution: an ecological context for C. elegans.

Fitch DH.

Curr Biol. 2005 Sep 6;15(17):R655-8. Review.

21.

Autosomal genes of autosomal/X-linked duplicated gene pairs and germ-line proliferation in Caenorhabditis elegans.

Maciejowski J, Ahn JH, Cipriani PG, Killian DJ, Chaudhary AL, Lee JI, Voutev R, Johnsen RC, Baillie DL, Gunsalus KC, Fitch DH, Hubbard EJ.

Genetics. 2005 Apr;169(4):1997-2011. Epub 2005 Jan 31.

22.

Initial Sequence and Protein Modeling Results of a Mitochondrial Genome Project on Understudied Invertebrate Phyla.

Robbins GE, Giribet G, Kiontke K, Fitch DH, Boore JL, Campbell RK.

Biol Bull. 2004 Oct;207(2):169. No abstract available.

PMID:
27690613
23.

Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss.

Kiontke K, Gavin NP, Raynes Y, Roehrig C, Piano F, Fitch DH.

Proc Natl Acad Sci U S A. 2004 Jun 15;101(24):9003-8. Epub 2004 Jun 7.

24.

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.

Stein LD, Bao Z, Blasiar D, Blumenthal T, Brent MR, Chen N, Chinwalla A, Clarke L, Clee C, Coghlan A, Coulson A, D'Eustachio P, Fitch DH, Fulton LA, Fulton RE, Griffiths-Jones S, Harris TW, Hillier LW, Kamath R, Kuwabara PE, Mardis ER, Marra MA, Miner TL, Minx P, Mullikin JC, Plumb RW, Rogers J, Schein JE, Sohrmann M, Spieth J, Stajich JE, Wei C, Willey D, Wilson RK, Durbin R, Waterston RH.

PLoS Biol. 2003 Nov;1(2):E45. Epub 2003 Nov 17.

25.

Absence of wolbachia in nonfilariid nematodes.

Bordenstein SR, Fitch DH, Werren JH.

J Nematol. 2003 Sep;35(3):266-70.

26.

One small step for worms, one giant leap for "Bauplan"?

Fitch DH, Sudhaus W.

Evol Dev. 2002 Jul-Aug;4(4):243-6. No abstract available.

PMID:
12168615
27.
28.

Evolution of "rhabditidae" and the male tail.

Fitch DH.

J Nematol. 2000 Sep;32(3):235-44.

29.

Morphogenesis of the Caenorhabditis elegans male tail tip.

Nguyen CQ, Hall DH, Yang Y, Fitch DH.

Dev Biol. 1999 Mar 1;207(1):86-106.

30.
32.

18S ribosomal RNA gene phylogeny for some Rhabditidae related to Caenorhabditis.

Fitch DH, Bugaj-Gaweda B, Emmons SW.

Mol Biol Evol. 1995 Mar;12(2):346-58.

PMID:
7700158
33.

Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish.

Radice AD, Bugaj B, Fitch DH, Emmons SW.

Mol Gen Genet. 1994 Sep 28;244(6):606-12.

PMID:
7969029
34.
36.
37.

Duplication of the gamma-globin gene mediated by L1 long interspersed repetitive elements in an early ancestor of simian primates.

Fitch DH, Bailey WJ, Tagle DA, Goodman M, Sieu L, Slightom JL.

Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7396-400.

38.
39.

Molecular evolution of the psi eta-globin gene locus: gibbon phylogeny and the hominoid slowdown.

Bailey WJ, Fitch DH, Tagle DA, Czelusniak J, Slightom JL, Goodman M.

Mol Biol Evol. 1991 Mar;8(2):155-84.

PMID:
2046542
40.
41.

Primate evolution at the DNA level and a classification of hominoids.

Goodman M, Tagle DA, Fitch DH, Bailey W, Czelusniak J, Koop BF, Benson P, Slightom JL.

J Mol Evol. 1990 Mar;30(3):260-6.

PMID:
2109087
42.
43.

Molecular phylogeny of the family of apes and humans.

Goodman M, Koop BF, Czelusniak J, Fitch DH, Tagle DA, Slightom JL.

Genome. 1989;31(1):316-35. Review.

PMID:
2687100
44.

The spider monkey psi eta-globin gene and surrounding sequences: recent or ancient insertions of LINEs and SINEs?

Fitch DH, Mainone C, Slightom JL, Goodman M.

Genomics. 1988 Oct;3(3):237-55.

PMID:
2852163
45.

External review in quality assurance.

Darnell RE, Fitch DH.

Phys Ther. 1980 May;60(5):559-63.

PMID:
7384226

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