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Lessons learned from relocating an acute surgical unit to a new quaternary referral centre in Adelaide, South Australia: a tale of two hospitals.

Barnett DR, Lu H, Finlay B, Coventry C, Granchi N, Marshall-Webb M, Heitmann P, Dobbins C.

ANZ J Surg. 2019 Oct 21. doi: 10.1111/ans.15498. [Epub ahead of print]


The neuroscience of vision and pain: evolution of two disciplines.

Finlay BL.

Philos Trans R Soc Lond B Biol Sci. 2019 Nov 11;374(1785):20190292. doi: 10.1098/rstb.2019.0292. Epub 2019 Sep 23.


Here, there, and everywhere: How pathogenic Escherichia coli sense and respond to gastrointestinal biogeography.

Woodward SE, Krekhno Z, Finlay BB.

Cell Microbiol. 2019 Nov;21(11):e13107. doi: 10.1111/cmi.13107. Epub 2019 Oct 31.


Generic Homo sapiens and Unique Mus musculus: Establishing the Typicality of the Modeled and the Model Species.

Finlay BL.

Brain Behav Evol. 2019;93(2-3):122-136. doi: 10.1159/000500111. Epub 2019 Aug 15. Review.


Gut microbes, ageing & organ function: a chameleon in modern biology?

Reza MM, Finlay BB, Pettersson S.

EMBO Mol Med. 2019 Sep;11(9):e9872. doi: 10.15252/emmm.201809872. Epub 2019 Aug 14. Review.


Generic preference-based health-related quality of life in children with neurodevelopmental disorders: a scoping review.

Lamsal R, Finlay B, Whitehurst DGT, Zwicker JD.

Dev Med Child Neurol. 2019 Jun 21. doi: 10.1111/dmcn.14301. [Epub ahead of print] Review.


Cosmopolitan Metapopulations?

Fenchel T, Finlay BJ, Esteban GF.

Protist. 2019 Jul;170(3):314-318. doi: 10.1016/j.protis.2019.05.002. Epub 2019 May 10.


The Microbiome Mediates Environmental Effects on Aging.

Finlay BB, Pettersson S, Melby MK, Bosch TCG.

Bioessays. 2019 Oct;41(10):e1800257. doi: 10.1002/bies.201800257. Epub 2019 Jun 3. Review.


Concepts, Goals and the Control of Survival-Related Behaviors.

Barrett LF, Finlay BL.

Curr Opin Behav Sci. 2018 Dec;24:172-179. doi: 10.1016/j.cobeha.2018.10.001. Epub 2018 Oct 29.


The Gut Microbiota-Brain Axis Expands Neurologic Function: A Nervous Rapport.

Bauer KC, Rees T, Finlay BB.

Bioessays. 2019 Oct;41(10):e1800268. doi: 10.1002/bies.201800268. Epub 2019 May 17. Review.


Bacteroides-Derived Sphingolipids Are Critical for Maintaining Intestinal Homeostasis and Symbiosis.

Brown EM, Ke X, Hitchcock D, Jeanfavre S, Avila-Pacheco J, Nakata T, Arthur TD, Fornelos N, Heim C, Franzosa EA, Watson N, Huttenhower C, Haiser HJ, Dillow G, Graham DB, Finlay BB, Kostic AD, Porter JA, Vlamakis H, Clish CB, Xavier RJ.

Cell Host Microbe. 2019 May 8;25(5):668-680.e7. doi: 10.1016/j.chom.2019.04.002.


Persistent Salmonella enterica Serovar Typhimurium Infection Induces Protease Expression During Intestinal Fibrosis.

Ehrhardt K, Steck N, Kappelhoff R, Stein S, Rieder F, Gordon IO, Boyle EC, Braubach P, Overall CM, Finlay BB, Grassl GA.

Inflamm Bowel Dis. 2019 May 9. pii: izz070. doi: 10.1093/ibd/izz070. [Epub ahead of print]


Thinking bigger: How early-life environmental exposures shape the gut microbiome and influence the development of asthma and allergic disease.

Sbihi H, Boutin RC, Cutler C, Suen M, Finlay BB, Turvey SE.

Allergy. 2019 Nov;74(11):2103-2115. doi: 10.1111/all.13812. Epub 2019 May 15. Review.


Human exceptionalism, our ordinary cortex and our research futures.

Finlay BL.

Dev Psychobiol. 2019 Apr;61(3):317-322. doi: 10.1002/dev.21838. Epub 2019 Feb 27.


Association between the intestinal microbiota and allergic sensitization, eczema, and asthma: A systematic review.

Zimmermann P, Messina N, Mohn WW, Finlay BB, Curtis N.

J Allergy Clin Immunol. 2019 Feb;143(2):467-485. doi: 10.1016/j.jaci.2018.09.025. Epub 2018 Dec 29.


Characterization of the Citrobacter rodentium Cpx regulon and its role in host infection.

Vogt SL, Scholz R, Peng Y, Guest RL, Scott NE, Woodward SE, Foster LJ, Raivio TL, Finlay BB.

Mol Microbiol. 2019 Mar;111(3):700-716. doi: 10.1111/mmi.14182. Epub 2019 Feb 11.


The Human Microbiome and Child Growth - First 1000 Days and Beyond.

Robertson RC, Manges AR, Finlay BB, Prendergast AJ.

Trends Microbiol. 2019 Feb;27(2):131-147. doi: 10.1016/j.tim.2018.09.008. Epub 2018 Oct 24. Review.


Global Profiling of Proteolysis from the Mitochondrial Amino Terminome during Early Intrinsic Apoptosis Prior to Caspase-3 Activation.

Marshall NC, Klein T, Thejoe M, von Krosigk N, Kizhakkedathu J, Finlay BB, Overall CM.

J Proteome Res. 2018 Dec 7;17(12):4279-4296. doi: 10.1021/acs.jproteome.8b00675. Epub 2018 Oct 29.


Comparing Adult Hippocampal Neurogenesis Across Species: Translating Time to Predict the Tempo in Humans.

Charvet CJ, Finlay BL.

Front Neurosci. 2018 Oct 5;12:706. doi: 10.3389/fnins.2018.00706. eCollection 2018.


Farewell Stan Stanley Falkow: 1934-2018.

Cabello FC, Cohen SN, Curtiss R 3rd, Dougan G, van Embden J, Finlay BB, Heffron F, Helinski D, Hull R, Hull S, Isberg R, Kopecko DJ, Levy S, Mekalanos J, Ortiz JM, Rappuoli R, Roberts MC, So M, Timmis KN.

Environ Microbiol. 2018 Jul;20(7):2322-2333. doi: 10.1111/1462-2920.14308. Epub 2018 Aug 26. No abstract available.


Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa.

Vonaesch P, Morien E, Andrianonimiadana L, Sanke H, Mbecko JR, Huus KE, Naharimanananirina T, Gondje BP, Nigatoloum SN, Vondo SS, Kaleb Kandou JE, Randremanana R, Rakotondrainipiana M, Mazel F, Djorie SG, Gody JC, Finlay BB, Rubbo PA, Wegener Parfrey L, Collard JM, Sansonetti PJ; Afribiota Investigators.

Proc Natl Acad Sci U S A. 2018 Sep 4;115(36):E8489-E8498. doi: 10.1073/pnas.1806573115. Epub 2018 Aug 20.


Characterization of the two conformations adopted by the T3SS inner-membrane protein PrgK.

Bergeron JRC, Brockerman JA, Vuckovic M, Deng W, Okon M, Finlay BB, McIntosh LP, Strynadka NCJ.

Protein Sci. 2018 Sep;27(9):1680-1691. doi: 10.1002/pro.3447. Epub 2018 Aug 10.


The Third Transmembrane Domain of EscR Is Critical for Function of the Enteropathogenic Escherichia coli Type III Secretion System.

Tseytin I, Madar A, Mitrovic B, Deng W, Finlay BB, Sal-Man N.

mSphere. 2018 Jul 25;3(4). pii: e00162-18. doi: 10.1128/mSphere.00162-18.


Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project.

Vonaesch P, Randremanana R, Gody JC, Collard JM, Giles-Vernick T, Doria M, Vigan-Womas I, Rubbo PA, Etienne A, Andriatahirintsoa EJ, Kapel N, Brown E, Huus KE, Duffy D, Finlay BB, Hasan M, Hunald FA, Robinson A, Manirakiza A, Wegener-Parfrey L, Vray M, Sansonetti PJ; AFRIBIOTA Investigators.

BMC Pediatr. 2018 Jul 19;18(1):236. doi: 10.1186/s12887-018-1189-5.


Care of patients with stomas in general practice.

Finlay B, Sexton H, McDonald C.

Aust J Gen Pract. 2018 Jun;47(6):362-365. doi: 10.31128/AJGP-12-17-4430.


Asymptomatic Intestinal Colonization with Protist Blastocystis Is Strongly Associated with Distinct Microbiome Ecological Patterns.

Nieves-Ramírez ME, Partida-Rodríguez O, Laforest-Lapointe I, Reynolds LA, Brown EM, Valdez-Salazar A, Morán-Silva P, Rojas-Velázquez L, Morien E, Parfrey LW, Jin M, Walter J, Torres J, Arrieta MC, Ximénez-García C, Finlay BB.

mSystems. 2018 Jun 26;3(3). pii: e00007-18. doi: 10.1128/mSystems.00007-18. eCollection 2018 May-Jun.


Nodular melanoma presenting as an exophytic subungual mass.

Finlay B, Ramachandren T, Hussey K, Parkyn S, Meyer K, Barrett K.

Scott Med J. 2018 Feb;63(1):32-34. doi: 10.1177/0036933018755938. Epub 2018 Jun 17.


Mammalian brain development and our grandmothering life history.

Hawkes K, Finlay BL.

Physiol Behav. 2018 Sep 1;193(Pt A):55-68. doi: 10.1016/j.physbeh.2018.01.013. Epub 2018 May 2. Review.


A Nonpyroptotic IFN-γ-Triggered Cell Death Mechanism in Nonphagocytic Cells Promotes Salmonella Clearance In Vivo.

Ingram JP, Tursi S, Zhang T, Guo W, Yin C, A Wynosky-Dolfi M, van der Heijden J, Cai KQ, Yamamoto M, Finlay BB, Brodsky IE, Grivennikov SI, Tükel Ç, Balachandran S.

J Immunol. 2018 May 15;200(10):3626-3634. doi: 10.4049/jimmunol.1701386. Epub 2018 Apr 13.


Radical Gastrectomy: Still the Cornerstone of Curative Treatment for Gastric Cancer in the Perioperative Chemotherapy Era-A Single Institute Experience over a Decade.

Kanhere H, Goel R, Finlay B, Trochsler M, Maddern G.

Int J Surg Oncol. 2018 Jan 14;2018:9371492. doi: 10.1155/2018/9371492. eCollection 2018.


Good Bug, Bad Bug: Breaking through Microbial Stereotypes.

Cirstea M, Radisavljevic N, Finlay BB.

Cell Host Microbe. 2018 Jan 10;23(1):10-13. doi: 10.1016/j.chom.2017.12.008.


Human Intestinal Microbiota: Interaction Between Parasites and the Host Immune Response.

Partida-Rodríguez O, Serrano-Vázquez A, Nieves-Ramírez ME, Moran P, Rojas L, Portillo T, González E, Hernández E, Finlay BB, Ximenez C.

Arch Med Res. 2017 Nov;48(8):690-700. doi: 10.1016/j.arcmed.2017.11.015. Epub 2017 Dec 28. Review.


Associations between infant fungal and bacterial dysbiosis and childhood atopic wheeze in a nonindustrialized setting.

Arrieta MC, Arévalo A, Stiemsma L, Dimitriu P, Chico ME, Loor S, Vaca M, Boutin RCT, Morien E, Jin M, Turvey SE, Walter J, Parfrey LW, Cooper PJ, Finlay B.

J Allergy Clin Immunol. 2018 Aug;142(2):424-434.e10. doi: 10.1016/j.jaci.2017.08.041. Epub 2017 Dec 11.


Microbial Insights into Asthmatic Immunopathology. A Forward-Looking Synthesis and Commentary.

Boutin RCT, Petersen C, Finlay BB.

Ann Am Thorac Soc. 2017 Nov;14(Supplement_5):S316-S325. doi: 10.1513/AnnalsATS.201707-534AW. Review.


Microbiome-driven allergic lung inflammation is ameliorated by short-chain fatty acids.

Cait A, Hughes MR, Antignano F, Cait J, Dimitriu PA, Maas KR, Reynolds LA, Hacker L, Mohr J, Finlay BB, Zaph C, McNagny KM, Mohn WW.

Mucosal Immunol. 2018 May;11(3):785-795. doi: 10.1038/mi.2017.75. Epub 2017 Oct 25.


Towards standards for human fecal sample processing in metagenomic studies.

Costea PI, Zeller G, Sunagawa S, Pelletier E, Alberti A, Levenez F, Tramontano M, Driessen M, Hercog R, Jung FE, Kultima JR, Hayward MR, Coelho LP, Allen-Vercoe E, Bertrand L, Blaut M, Brown JRM, Carton T, Cools-Portier S, Daigneault M, Derrien M, Druesne A, de Vos WM, Finlay BB, Flint HJ, Guarner F, Hattori M, Heilig H, Luna RA, van Hylckama Vlieg J, Junick J, Klymiuk I, Langella P, Le Chatelier E, Mai V, Manichanh C, Martin JC, Mery C, Morita H, O'Toole PW, Orvain C, Patil KR, Penders J, Persson S, Pons N, Popova M, Salonen A, Saulnier D, Scott KP, Singh B, Slezak K, Veiga P, Versalovic J, Zhao L, Zoetendal EG, Ehrlich SD, Dore J, Bork P.

Nat Biotechnol. 2017 Nov;35(11):1069-1076. doi: 10.1038/nbt.3960. Epub 2017 Oct 2.


Infections: Feeding the microbial multitudes: co-infection in a malnourished host.

Huus KE, Finlay BB.

Nat Rev Gastroenterol Hepatol. 2017 Dec;14(12):695-696. doi: 10.1038/nrgastro.2017.133. Epub 2017 Sep 27. No abstract available.


Coevolution in the timing of GABAergic and pyramidal neuron maturation in primates.

Charvet CJ, Šimić G, Kostović I, Knezović V, Vukšić M, Babić Leko M, Takahashi E, Sherwood CC, Wolfe MD, Finlay BL.

Proc Biol Sci. 2017 Aug 30;284(1861). pii: 20171169. doi: 10.1098/rspb.2017.1169.


Neutropenia and thrombocytopenia after cytoreductive surgery and heated intraperitoneal chemotherapy.

Finlay B, Price T, Hewett P.

Pleura Peritoneum. 2017 Sep 1;2(3):137-141. doi: 10.1515/pp-2017-0008. Epub 2017 Aug 12.


What the SIF Is Happening-The Role of Intracellular Salmonella-Induced Filaments.

Knuff K, Finlay BB.

Front Cell Infect Microbiol. 2017 Jul 25;7:335. doi: 10.3389/fcimb.2017.00335. eCollection 2017. Review.


Repression of Salmonella Host Cell Invasion by Aromatic Small Molecules from the Human Fecal Metabolome.

Peixoto RJM, Alves ES, Wang M, Ferreira RBR, Granato A, Han J, Gill H, Jacobson K, Lobo LA, Domingues RMCP, Borchers CH, Davies JE, Finlay BB, Antunes LCM.

Appl Environ Microbiol. 2017 Sep 15;83(19). pii: e01148-17. doi: 10.1128/AEM.01148-17. Print 2017 Oct 1.


Initial Gut Microbial Composition as a Key Factor Driving Host Response to Antibiotic Treatment, as Exemplified by the Presence or Absence of Commensal Escherichia coli.

Ju T, Shoblak Y, Gao Y, Yang K, Fouhse J, Finlay BB, So YW, Stothard P, Willing BP.

Appl Environ Microbiol. 2017 Aug 17;83(17). pii: e01107-17. doi: 10.1128/AEM.01107-17. Print 2017 Sep 1.


Gut microbiota-mediated protection against diarrheal infections.

Vogt SL, Finlay BB.

J Travel Med. 2017 Apr 1;24(suppl_1):S39-S43. doi: 10.1093/jtm/taw086. Review.


Early life factors that affect allergy development.

Reynolds LA, Finlay BB.

Nat Rev Immunol. 2017 Aug;17(8):518-528. doi: 10.1038/nri.2017.39. Epub 2017 May 15. Review.


Corrigendum: Assembly, structure, function and regulation of type III secretion systems.

Deng W, Marshall NC, Rowland JL, McCoy JM, Worrall LJ, Santos AS, Strynadka NCJ, Finlay BB.

Nat Rev Microbiol. 2017 May 12;15(6):379. doi: 10.1038/nrmicro.2017.54. No abstract available.


Assembly, structure, function and regulation of type III secretion systems.

Deng W, Marshall NC, Rowland JL, McCoy JM, Worrall LJ, Santos AS, Strynadka NCJ, Finlay BB.

Nat Rev Microbiol. 2017 Jun;15(6):323-337. doi: 10.1038/nrmicro.2017.20. Epub 2017 Apr 10. Review. Erratum in: Nat Rev Microbiol. 2017 May 12;15(6):379.


Enteric Helminths Promote Salmonella Coinfection by Altering the Intestinal Metabolome.

Reynolds LA, Redpath SA, Yurist-Doutsch S, Gill N, Brown EM, van der Heijden J, Brosschot TP, Han J, Marshall NC, Woodward SE, Valdez Y, Borchers CH, Perona-Wright G, Finlay BB.

J Infect Dis. 2017 Apr 15;215(8):1245-1254. doi: 10.1093/infdis/jix141.


From bugs to brains: The microbiome in neurological health.

McKay KA, Kowalec K, Brinkman F, Finlay BB, Horwitz M, Manges AR, Osborne L, Tremlett H.

Mult Scler Relat Disord. 2017 Feb;12:1-3. doi: 10.1016/j.msard.2016.12.007. Epub 2016 Dec 18.


The gut microbiome in human neurological disease: A review.

Tremlett H, Bauer KC, Appel-Cresswell S, Finlay BB, Waubant E.

Ann Neurol. 2017 Mar;81(3):369-382. doi: 10.1002/ana.24901. Epub 2017 Mar 20. Review.


Sharpening Host Defenses during Infection: Proteases Cut to the Chase.

Marshall NC, Finlay BB, Overall CM.

Mol Cell Proteomics. 2017 Apr;16(4 suppl 1):S161-S171. doi: 10.1074/mcp.O116.066456. Epub 2017 Feb 8. Review.

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