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Items: 1 to 50 of 75

1.

Cyt-Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2018 Conference Workshops.

Czechowska K, Lannigan J, Wang L, Arcidiacono J, Ashhurst TM, Barnard RM, Bauer S, Bispo C, Bonilla DL, Brinkman RR, Cabanski M, Chang HD, Chakrabarti L, Chojnowski G, Cotleur B, Degheidy H, Dela Cruz GV, Eck S, Elliott J, Errington R, Filby A, Gagnon D, Gardner R, Green C, Gregory M, Groves CJ, Hall C, Hammes F, Hedrick M, Hoffman R, Icha J, Ivaska J, Jenner DC, Jones D, Kerckhof FM, Kukat C, Lanham D, Leavesley S, Lee M, Lin-Gibson S, Litwin V, Liu Y, Molloy J, Moore JS, Müller S, Nedbal J, Niesner R, Nitta N, Ohlsson-Wilhelm B, Paul NE, Perfetto S, Portat Z, Props R, Radtke S, Rayanki R, Rieger A, Rogers S, Rubbens P, Salomon R, Schiemann M, Sharpe J, Sonder SU, Stewart JJ, Sun Y, Ulrich H, Van Isterdael G, Vitaliti A, van Vreden C, Weber M, Zimmermann J, Vacca G, Wallace P, Tárnok A.

Cytometry A. 2019 Jun;95(6):598-644. doi: 10.1002/cyto.a.23777. No abstract available.

PMID:
31207046
2.

Label-Free Identification of White Blood Cells Using Machine Learning.

Nassar M, Doan M, Filby A, Wolkenhauer O, Fogg DK, Piasecka J, Thornton CA, Carpenter AE, Summers HD, Rees P, Hennig H.

Cytometry A. 2019 Aug;95(8):836-842. doi: 10.1002/cyto.a.23794. Epub 2019 May 13.

PMID:
31081599
3.

In Flow Cytometry, Image Is Everything.

Goda K, Filby A, Nitta N.

Cytometry A. 2019 May;95(5):475-477. doi: 10.1002/cyto.a.23778. Epub 2019 May 3. No abstract available.

PMID:
31050393
4.

Lipopolysaccharide inhalation recruits monocytes and dendritic cell subsets to the alveolar airspace.

Jardine L, Wiscombe S, Reynolds G, McDonald D, Fuller A, Green K, Filby A, Forrest I, Ruchaud-Sparagano MH, Scott J, Collin M, Haniffa M, Simpson AJ.

Nat Commun. 2019 Apr 30;10(1):1999. doi: 10.1038/s41467-019-09913-4.

5.

Shared Resource Laboratory (SRL) Communications-A New Journal Type.

Davies D, Filby A, Lannigan J.

Cytometry A. 2019 Feb;95(2):141-143. doi: 10.1002/cyto.a.23703. Epub 2018 Dec 14. No abstract available.

PMID:
30549381
6.

A cost-effectiveness analysis of endoscopic eradication therapy for management of dysplasia arising in patients with Barrett's oesophagus in the United Kingdom.

Pollit V, Graham D, Leonard C, Filby A, McMaster J, Mealing SJ, Lovat LB, Haidry RJ.

Curr Med Res Opin. 2019 May;35(5):805-815. doi: 10.1080/03007995.2018.1552407. Epub 2019 Jan 3.

PMID:
30479169
7.

Single-cell reconstruction of the early maternal-fetal interface in humans.

Vento-Tormo R, Efremova M, Botting RA, Turco MY, Vento-Tormo M, Meyer KB, Park JE, Stephenson E, Polański K, Goncalves A, Gardner L, Holmqvist S, Henriksson J, Zou A, Sharkey AM, Millar B, Innes B, Wood L, Wilbrey-Clark A, Payne RP, Ivarsson MA, Lisgo S, Filby A, Rowitch DH, Bulmer JN, Wright GJ, Stubbington MJT, Haniffa M, Moffett A, Teichmann SA.

Nature. 2018 Nov;563(7731):347-353. doi: 10.1038/s41586-018-0698-6. Epub 2018 Nov 14.

PMID:
30429548
8.

Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors.

Young MD, Mitchell TJ, Vieira Braga FA, Tran MGB, Stewart BJ, Ferdinand JR, Collord G, Botting RA, Popescu DM, Loudon KW, Vento-Tormo R, Stephenson E, Cagan A, Farndon SJ, Del Castillo Velasco-Herrera M, Guzzo C, Richoz N, Mamanova L, Aho T, Armitage JN, Riddick ACP, Mushtaq I, Farrell S, Rampling D, Nicholson J, Filby A, Burge J, Lisgo S, Maxwell PH, Lindsay S, Warren AY, Stewart GD, Sebire N, Coleman N, Haniffa M, Teichmann SA, Clatworthy M, Behjati S.

Science. 2018 Aug 10;361(6402):594-599. doi: 10.1126/science.aat1699.

9.

Smoking Cessation: A Comparison of Two Model Structures.

Pennington B, Filby A, Owen L, Taylor M.

Pharmacoeconomics. 2018 Sep;36(9):1101-1112. doi: 10.1007/s40273-018-0657-y.

10.

Global phenotypic characterisation of human platelet lysate expanded MSCs by high-throughput flow cytometry.

Reis M, McDonald D, Nicholson L, Godthardt K, Knobel S, Dickinson AM, Filby A, Wang XN.

Sci Rep. 2018 Mar 2;8(1):3907. doi: 10.1038/s41598-018-22326-5.

11.

Diagnostic Potential of Imaging Flow Cytometry.

Doan M, Vorobjev I, Rees P, Filby A, Wolkenhauer O, Goldfeld AE, Lieberman J, Barteneva N, Carpenter AE, Hennig H.

Trends Biotechnol. 2018 Jul;36(7):649-652. doi: 10.1016/j.tibtech.2017.12.008. Epub 2018 Jan 31.

12.

The surface chemistry of sapphire-c: A literature review and a study on various factors influencing its IEP.

Lützenkirchen J, Franks GV, Plaschke M, Zimmermann R, Heberling F, Abdelmonem A, Darbha GK, Schild D, Filby A, Eng P, Catalano JG, Rosenqvist J, Preocanin T, Aytug T, Zhang D, Gan Y, Braunschweig B.

Adv Colloid Interface Sci. 2018 Jan;251:1-25. doi: 10.1016/j.cis.2017.12.004. Epub 2017 Dec 13. Review.

PMID:
29287789
13.

Guidelines for the use of flow cytometry and cell sorting in immunological studies.

Cossarizza A, Chang HD, Radbruch A, Akdis M, Andrä I, Annunziato F, Bacher P, Barnaba V, Battistini L, Bauer WM, Baumgart S, Becher B, Beisker W, Berek C, Blanco A, Borsellino G, Boulais PE, Brinkman RR, Büscher M, Busch DH, Bushnell TP, Cao X, Cavani A, Chattopadhyay PK, Cheng Q, Chow S, Clerici M, Cooke A, Cosma A, Cosmi L, Cumano A, Dang VD, Davies D, De Biasi S, Del Zotto G, Della Bella S, Dellabona P, Deniz G, Dessing M, Diefenbach A, Di Santo J, Dieli F, Dolf A, Donnenberg VS, Dörner T, Ehrhardt GRA, Endl E, Engel P, Engelhardt B, Esser C, Everts B, Dreher A, Falk CS, Fehniger TA, Filby A, Fillatreau S, Follo M, Förster I, Foster J, Foulds GA, Frenette PS, Galbraith D, Garbi N, García-Godoy MD, Geginat J, Ghoreschi K, Gibellini L, Goettlinger C, Goodyear CS, Gori A, Grogan J, Gross M, Grützkau A, Grummitt D, Hahn J, Hammer Q, Hauser AE, Haviland DL, Hedley D, Herrera G, Herrmann M, Hiepe F, Holland T, Hombrink P, Houston JP, Hoyer BF, Huang B, Hunter CA, Iannone A, Jäck HM, Jávega B, Jonjic S, Juelke K, Jung S, Kaiser T, Kalina T, Keller B, Khan S, Kienhöfer D, Kroneis T, Kunkel D, Kurts C, Kvistborg P, Lannigan J, Lantz O, Larbi A, LeibundGut-Landmann S, Leipold MD, Levings MK, Litwin V, Liu Y, Lohoff M, Lombardi G, Lopez L, Lovett-Racke A, Lubberts E, Ludewig B, Lugli E, Maecker HT, Martrus G, Matarese G, Maueröder C, McGrath M, McInnes I, Mei HE, Melchers F, Melzer S, Mielenz D, Mills K, Mirrer D, Mjösberg J, Moore J, Moran B, Moretta A, Moretta L, Mosmann TR, Müller S, Müller W, Münz C, Multhoff G, Munoz LE, Murphy KM, Nakayama T, Nasi M, Neudörfl C, Nolan J, Nourshargh S, O'Connor JE, Ouyang W, Oxenius A, Palankar R, Panse I, Peterson P, Peth C, Petriz J, Philips D, Pickl W, Piconese S, Pinti M, Pockley AG, Podolska MJ, Pucillo C, Quataert SA, Radstake TRDJ, Rajwa B, Rebhahn JA, Recktenwald D, Remmerswaal EBM, Rezvani K, Rico LG, Robinson JP, Romagnani C, Rubartelli A, Ruckert B, Ruland J, Sakaguchi S, Sala-de-Oyanguren F, Samstag Y, Sanderson S, Sawitzki B, Scheffold A, Schiemann M, Schildberg F, Schimisky E, Schmid SA, Schmitt S, Schober K, Schüler T, Schulz AR, Schumacher T, Scotta C, Shankey TV, Shemer A, Simon AK, Spidlen J, Stall AM, Stark R, Stehle C, Stein M, Steinmetz T, Stockinger H, Takahama Y, Tarnok A, Tian Z, Toldi G, Tornack J, Traggiai E, Trotter J, Ulrich H, van der Braber M, van Lier RAW, Veldhoen M, Vento-Asturias S, Vieira P, Voehringer D, Volk HD, von Volkmann K, Waisman A, Walker R, Ward MD, Warnatz K, Warth S, Watson JV, Watzl C, Wegener L, Wiedemann A, Wienands J, Willimsky G, Wing J, Wurst P, Yu L, Yue A, Zhang Q, Zhao Y, Ziegler S, Zimmermann J.

Eur J Immunol. 2017 Oct;47(10):1584-1797. doi: 10.1002/eji.201646632. No abstract available.

14.

A human patient-derived cellular model of Joubert syndrome reveals ciliary defects which can be rescued with targeted therapies.

Srivastava S, Ramsbottom SA, Molinari E, Alkanderi S, Filby A, White K, Henry C, Saunier S, Miles CG, Sayer JA.

Hum Mol Genet. 2017 Dec 1;26(23):4657-4667. doi: 10.1093/hmg/ddx347.

15.

Imaging cytometry: Automated morphology and feature extraction.

Filby A, Houston JP.

Cytometry A. 2017 Sep;91(9):851-853. doi: 10.1002/cyto.a.23200. No abstract available.

16.

Reconstructing cell cycle and disease progression using deep learning.

Eulenberg P, Köhler N, Blasi T, Filby A, Carpenter AE, Rees P, Theis FJ, Wolf FA.

Nat Commun. 2017 Sep 6;8(1):463. doi: 10.1038/s41467-017-00623-3.

17.

Caveolin-1 Influences LFA-1 Redistribution upon TCR Stimulation in CD8 T Cells.

Borger JG, Morrison VL, Filby A, Garcia C, Uotila LM, Simbari F, Fagerholm SC, Zamoyska R.

J Immunol. 2017 Aug 1;199(3):874-884. doi: 10.4049/jimmunol.1700431. Epub 2017 Jun 21.

18.

Cost-effectiveness analysis of endoscopic eradication therapy for treatment of high-grade dysplasia in Barrett's esophagus.

Filby A, Taylor M, Lipman G, Lovat L, Haidry R.

J Comp Eff Res. 2017 Jul;6(5):425-436. doi: 10.2217/cer-2016-0089. Epub 2017 May 25.

19.

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors.

Villani AC, Satija R, Reynolds G, Sarkizova S, Shekhar K, Fletcher J, Griesbeck M, Butler A, Zheng S, Lazo S, Jardine L, Dixon D, Stephenson E, Nilsson E, Grundberg I, McDonald D, Filby A, Li W, De Jager PL, Rozenblatt-Rosen O, Lane AA, Haniffa M, Regev A, Hacohen N.

Science. 2017 Apr 21;356(6335). pii: eaah4573. doi: 10.1126/science.aah4573.

20.

Sample preparation for flow cytometry benefits from some lateral thinking.

Filby A.

Cytometry A. 2016 Dec;89(12):1054-1056. doi: 10.1002/cyto.a.23021. Epub 2016 Nov 22. No abstract available.

21.

An open-source solution for advanced imaging flow cytometry data analysis using machine learning.

Hennig H, Rees P, Blasi T, Kamentsky L, Hung J, Dao D, Carpenter AE, Filby A.

Methods. 2017 Jan 1;112:201-210. doi: 10.1016/j.ymeth.2016.08.018. Epub 2016 Sep 2.

22.

The Analysis of Cell Cycle, Proliferation, and Asymmetric Cell Division by Imaging Flow Cytometry.

Filby A, Day W, Purewal S, Martinez-Martin N.

Methods Mol Biol. 2016;1389:71-95. doi: 10.1007/978-1-4939-3302-0_5.

PMID:
27460238
23.

What Prevents Quality Midwifery Care? A Systematic Mapping of Barriers in Low and Middle Income Countries from the Provider Perspective.

Filby A, McConville F, Portela A.

PLoS One. 2016 May 2;11(5):e0153391. doi: 10.1371/journal.pone.0153391. eCollection 2016. Review.

24.

Long-term in vitro maintenance of clonal abundance and leukaemia-initiating potential in acute lymphoblastic leukaemia.

Pal D, Blair HJ, Elder A, Dormon K, Rennie KJ, Coleman DJ, Weiland J, Rankin KS, Filby A, Heidenreich O, Vormoor J.

Leukemia. 2016 Aug;30(8):1691-700. doi: 10.1038/leu.2016.79. Epub 2016 May 25.

25.

Frequency and Dynamics of Leukemia-Initiating Cells during Short-term Ex Vivo Culture Informs Outcomes in Acute Myeloid Leukemia Patients.

Griessinger E, Anjos-Afonso F, Vargaftig J, Taussig DC, Lassailly F, Prebet T, Imbert V, Nebout M, Vey N, Chabannon C, Filby A, Bollet-Quivogne F, Gribben JG, Peyron JF, Bonnet D.

Cancer Res. 2016 Apr 15;76(8):2082-6. doi: 10.1158/0008-5472.CAN-15-2063. Epub 2016 Mar 9.

26.

Label-free cell cycle analysis for high-throughput imaging flow cytometry.

Blasi T, Hennig H, Summers HD, Theis FJ, Cerveira J, Patterson JO, Davies D, Filby A, Carpenter AE, Rees P.

Nat Commun. 2016 Jan 7;7:10256. doi: 10.1038/ncomms10256.

27.

Stepwise B-cell-dependent expansion of T helper clonotypes diversifies the T-cell response.

Merkenschlager J, Ploquin MJ, Eksmond U, Andargachew R, Thorborn G, Filby A, Pepper M, Evavold B, Kassiotis G.

Nat Commun. 2016 Jan 5;7:10281. doi: 10.1038/ncomms10281.

28.

Examining the implementation of NICE guidance: cross-sectional survey of the use of NICE interventional procedures guidance by NHS Trusts.

Lowson K, Jenks M, Filby A, Carr L, Campbell B, Powell J.

Implement Sci. 2015 Jun 30;10:93. doi: 10.1186/s13012-015-0283-4.

29.

New, clear fusion from the cellular perspective: Measuring cellular fusion in Saccharomyces cerevisiae by flow cytometry.

Filby A.

Cytometry A. 2015 Sep;87(9):797-9. doi: 10.1002/cyto.a.22714. Epub 2015 Jun 26. No abstract available.

30.

CONSUMER PREFERENCES FOR SCANNING MODALITY TO DIAGNOSE FOCAL LIVER LESIONS.

Whitty J, Filby A, Smith AB, Carr LM.

Int J Technol Assess Health Care. 2015 Jan;31(1-2):27-35.

31.

An imaging flow cytometry-based approach to measuring the spatiotemporal calcium mobilisation in activated T cells.

Cerveira J, Begum J, Di Marco Barros R, van der Veen AG, Filby A.

J Immunol Methods. 2015 Aug;423:120-30. doi: 10.1016/j.jim.2015.04.030. Epub 2015 May 9.

PMID:
25967946
32.

An Imaging Flow Cytometry-based approach to analyse the fission yeast cell cycle in fixed cells.

Patterson JO, Swaffer M, Filby A.

Methods. 2015 Jul 1;82:74-84. doi: 10.1016/j.ymeth.2015.04.026. Epub 2015 May 4.

PMID:
25952947
33.

Appraising the suitability of succinimidyl and lipophilic fluorescent dyes to track proliferation in non-quiescent cells by dye dilution.

Filby A, Begum J, Jalal M, Day W.

Methods. 2015 Jul 1;82:29-37. doi: 10.1016/j.ymeth.2015.02.016. Epub 2015 Mar 20.

PMID:
25802116
34.

Methodological Evaluation Of The Impact Of Survival Costs In Oncology Modelling.

Taylor M, Filby A, Proudfoot C.

Value Health. 2014 Nov;17(7):A562-3. doi: 10.1016/j.jval.2014.08.1863. Epub 2014 Oct 26. No abstract available.

35.

High liver content of polybrominated diphenyl ether (PBDE) in otters (Lutra lutra) from England and Wales.

Pountney A, Filby AL, Thomas GO, Simpson VR, Chadwick EA, Stevens JR, Tyler CR.

Chemosphere. 2015 Jan;118:81-6. doi: 10.1016/j.chemosphere.2014.06.051. Epub 2014 Jul 9.

PMID:
25014662
36.
37.

"Mega" cytometry for a "mega" challenging cell type.

Filby A.

Cytometry A. 2014 Apr;85(4):289-91. doi: 10.1002/cyto.a.22435. Epub 2014 Jan 16. No abstract available.

38.

The vas::egfp transgenic zebrafish: a practical model for studies on the molecular mechanisms by which environmental estrogens affect gonadal sex differentiation.

Filby AL, Ortiz-Zarragoitia M, Tyler CR.

Environ Toxicol Chem. 2014 Mar;33(3):602-5. doi: 10.1002/etc.2467. Epub 2014 Jan 24.

PMID:
24273055
39.

A method for evaluating the use of fluorescent dyes to track proliferation in cell lines by dye dilution.

Begum J, Day W, Henderson C, Purewal S, Cerveira J, Summers H, Rees P, Davies D, Filby A.

Cytometry A. 2013 Dec;83(12):1085-95. doi: 10.1002/cyto.a.22403. Epub 2013 Oct 25.

40.

Genetic tracing via DNGR-1 expression history defines dendritic cells as a hematopoietic lineage.

Schraml BU, van Blijswijk J, Zelenay S, Whitney PG, Filby A, Acton SE, Rogers NC, Moncaut N, Carvajal JJ, Reis e Sousa C.

Cell. 2013 Aug 15;154(4):843-58. doi: 10.1016/j.cell.2013.07.014.

41.

Regulation of asymmetric cell division and polarity by Scribble is not required for humoral immunity.

Hawkins ED, Oliaro J, Kallies A, Belz GT, Filby A, Hogan T, Haynes N, Ramsbottom KM, Van Ham V, Kinwell T, Seddon B, Davies D, Tarlinton D, Lew AM, Humbert PO, Russell SM.

Nat Commun. 2013;4:1801. doi: 10.1038/ncomms2796.

PMID:
23653213
42.

Differential polarization of C-terminal Src kinase between naive and antigen-experienced CD8+ T cells.

Borger JG, Filby A, Zamoyska R.

J Immunol. 2013 Apr 1;190(7):3089-99. doi: 10.4049/jimmunol.1202408. Epub 2013 Feb 20.

43.

Reporting imaging flow cytometry data for publication: why mask the detail?

Filby A, Davies D.

Cytometry A. 2012 Aug;81(8):637-42. doi: 10.1002/cyto.a.22091. Epub 2012 Jul 3. No abstract available.

44.

Environmental estrogen-induced alterations of male aggression and dominance hierarchies in fish: a mechanistic analysis.

Filby AL, Paull GC, Searle F, Ortiz-Zarragoitia M, Tyler CR.

Environ Sci Technol. 2012 Mar 20;46(6):3472-9. doi: 10.1021/es204023d. Epub 2012 Mar 8.

PMID:
22360147
45.

Asymmetric segregation of polarized antigen on B cell division shapes presentation capacity.

Thaunat O, Granja AG, Barral P, Filby A, Montaner B, Collinson L, Martinez-Martin N, Harwood NE, Bruckbauer A, Batista FD.

Science. 2012 Jan 27;335(6067):475-9. doi: 10.1126/science.1214100.

46.

An imaging flow cytometric method for measuring cell division history and molecular symmetry during mitosis.

Filby A, Perucha E, Summers H, Rees P, Chana P, Heck S, Lord GM, Davies D.

Cytometry A. 2011 Jul;79(7):496-506. doi: 10.1002/cyto.a.21091. Epub 2011 Jun 2.

47.

Heterogeneous sensitivity of human acute myeloid leukemia to β-catenin down-modulation.

Gandillet A, Park S, Lassailly F, Griessinger E, Vargaftig J, Filby A, Lister TA, Bonnet D.

Leukemia. 2011 May;25(5):770-780. doi: 10.1038/leu.2011.17. Epub 2011 Feb 22.

48.

Mislocalization of Lck impairs thymocyte differentiation and can promote development of thymomas.

Salmond RJ, Filby A, Pirinen N, Magee AI, Zamoyska R.

Blood. 2011 Jan 6;117(1):108-17. doi: 10.1182/blood-2010-03-277160. Epub 2010 Sep 28.

49.

Physiological and health consequences of social status in zebrafish (Danio rerio).

Filby AL, Paull GC, Bartlett EJ, Van Look KJ, Tyler CR.

Physiol Behav. 2010 Dec 2;101(5):576-87. doi: 10.1016/j.physbeh.2010.09.004. Epub 2010 Sep 16.

PMID:
20851709
50.

Unravelling the neurophysiological basis of aggression in a fish model.

Filby AL, Paull GC, Hickmore TF, Tyler CR.

BMC Genomics. 2010 Sep 16;11:498. doi: 10.1186/1471-2164-11-498.

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