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Items: 34

1.

Dynamic Modeling of Streptococcus pneumoniae Competence Provides Regulatory Mechanistic Insights Into Its Tight Temporal Regulation.

Weyder M, Prudhomme M, Bergé M, Polard P, Fichant G.

Front Microbiol. 2018 Jul 24;9:1637. doi: 10.3389/fmicb.2018.01637. eCollection 2018.

2.

Single-strand DNA processing: phylogenomics and sequence diversity of a superfamily of potential prokaryotic HuH endonucleases.

Quentin Y, Siguier P, Chandler M, Fichant G.

BMC Genomics. 2018 Jun 19;19(1):475. doi: 10.1186/s12864-018-4836-1.

3.

Insights into RNA-processing pathways and associated RNA-degrading enzymes in Archaea.

Clouet-d'Orval B, Batista M, Bouvier M, Quentin Y, Fichant G, Marchfelder A, Maier LK.

FEMS Microbiol Rev. 2018 Sep 1;42(5):579-613. doi: 10.1093/femsre/fuy016. Review.

PMID:
29684129
4.

Evolution of Mycolic Acid Biosynthesis Genes and Their Regulation during Starvation in Mycobacterium tuberculosis.

Jamet S, Quentin Y, Coudray C, Texier P, Laval F, Daffé M, Fichant G, Cam K.

J Bacteriol. 2015 Dec;197(24):3797-811. doi: 10.1128/JB.00433-15. Epub 2015 Sep 28.

5.

Bacterial transformation: distribution, shared mechanisms and divergent control.

Johnston C, Martin B, Fichant G, Polard P, Claverys JP.

Nat Rev Microbiol. 2014 Mar;12(3):181-96. doi: 10.1038/nrmicro3199. Epub 2014 Feb 10. Review.

PMID:
24509783
6.

Diversity of β-lactam resistance mechanisms in cystic fibrosis isolates of Pseudomonas aeruginosa: a French multicentre study.

Llanes C, Pourcel C, Richardot C, Plésiat P, Fichant G, Cavallo JD, Mérens A; GERPA Study Group.

J Antimicrob Chemother. 2013 Aug;68(8):1763-71. doi: 10.1093/jac/dkt115. Epub 2013 Apr 29.

PMID:
23629014
7.

Direct involvement of DprA, the transformation-dedicated RecA loader, in the shut-off of pneumococcal competence.

Mirouze N, Bergé MA, Soulet AL, Mortier-Barrière I, Quentin Y, Fichant G, Granadel C, Noirot-Gros MF, Noirot P, Polard P, Martin B, Claverys JP.

Proc Natl Acad Sci U S A. 2013 Mar 12;110(11):E1035-44. doi: 10.1073/pnas.1219868110. Epub 2013 Feb 25.

8.

Centromere binding and evolution of chromosomal partition systems in the Burkholderiales.

Passot FM, Calderon V, Fichant G, Lane D, Pasta F.

J Bacteriol. 2012 Jul;194(13):3426-36. doi: 10.1128/JB.00041-12. Epub 2012 Apr 20.

9.

Structuring the bacterial genome: Y1-transposases associated with REP-BIME sequences.

Ton-Hoang B, Siguier P, Quentin Y, Onillon S, Marty B, Fichant G, Chandler M.

Nucleic Acids Res. 2012 Apr;40(8):3596-609. doi: 10.1093/nar/gkr1198. Epub 2011 Dec 22.

10.

The cyst-dividing bacterium Ramlibacter tataouinensis TTB310 genome reveals a well-stocked toolbox for adaptation to a desert environment.

De Luca G, Barakat M, Ortet P, Fochesato S, Jourlin-Castelli C, Ansaldi M, Py B, Fichant G, Coutinho PM, Voulhoux R, Bastien O, Maréchal E, Henrissat B, Quentin Y, Noirot P, Filloux A, Méjean V, DuBow MS, Barras F, Barbe V, Weissenbach J, Mihalcescu I, Verméglio A, Achouak W, Heulin T.

PLoS One. 2011;6(9):e23784. doi: 10.1371/journal.pone.0023784. Epub 2011 Sep 1.

11.

The PprA-PprB two-component system activates CupE, the first non-archetypal Pseudomonas aeruginosa chaperone-usher pathway system assembling fimbriae.

Giraud C, Bernard CS, Calderon V, Yang L, Filloux A, Molin S, Fichant G, Bordi C, de Bentzmann S.

Environ Microbiol. 2011 Mar;13(3):666-83. doi: 10.1111/j.1462-2920.2010.02372.x. Epub 2010 Nov 22.

PMID:
21091863
12.

Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits.

O'Donohue MF, Choesmel V, Faubladier M, Fichant G, Gleizes PE.

J Cell Biol. 2010 Sep 6;190(5):853-66. doi: 10.1083/jcb.201005117.

13.

SpxA1, a novel transcriptional regulator involved in X-state (competence) development in Streptococcus pneumoniae.

Turlan C, Prudhomme M, Fichant G, Martin B, Gutierrez C.

Mol Microbiol. 2009 Aug;73(3):492-506. doi: 10.1111/j.1365-2958.2009.06789.x. Epub 2009 Jul 13.

14.

Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learned from available microbial genomic resources?

Boyer F, Fichant G, Berthod J, Vandenbrouck Y, Attree I.

BMC Genomics. 2009 Mar 12;10:104. doi: 10.1186/1471-2164-10-104.

15.

A key presynaptic role in transformation for a widespread bacterial protein: DprA conveys incoming ssDNA to RecA.

Mortier-Barrière I, Velten M, Dupaigne P, Mirouze N, Piétrement O, McGovern S, Fichant G, Martin B, Noirot P, Le Cam E, Polard P, Claverys JP.

Cell. 2007 Sep 7;130(5):824-36.

16.

Phylogenetic exploration of bacterial genomic rearrangements.

Fremez R, Faraut T, Fichant G, Gouzy J, Quentin Y.

Bioinformatics. 2007 May 1;23(9):1172-4. Epub 2007 Mar 1.

PMID:
17332021
17.

Independent evolution of competence regulatory cascades in streptococci?

Martin B, Quentin Y, Fichant G, Claverys JP.

Trends Microbiol. 2006 Aug;14(8):339-45. Epub 2006 Jul 3. Review.

PMID:
16820295
18.

ABCdb: an online resource for ABC transporter repertories from sequenced archaeal and bacterial genomes.

Fichant G, Basse MJ, Quentin Y.

FEMS Microbiol Lett. 2006 Mar;256(2):333-9.

19.

ISYMOD: a knowledge warehouse for the identification, assembly and analysis of bacterial integrated systems.

Chabalier J, Capponi C, Quentin Y, Fichant G.

Bioinformatics. 2005 Apr 1;21(7):1246-56. Epub 2004 Nov 5.

PMID:
15531617
20.

Recognition of cell surface acceptors by two human alpha-2,6-sialyltransferases produced in CHO cells.

Donadio S, Dubois C, Fichant G, Roybon L, Guillemot JC, Breton C, Ronin C.

Biochimie. 2003 Mar-Apr;85(3-4):311-21.

PMID:
12770770
21.
22.
23.

ABCdb: an ABC transporter database.

Quentin Y, Fichant G.

J Mol Microbiol Biotechnol. 2000 Oct;2(4):501-4.

PMID:
11075924
24.

Bacterial twin-arginine signal peptide-dependent protein translocation pathway: evolution and mechanism.

Wu LF, Ize B, Chanal A, Quentin Y, Fichant G.

J Mol Microbiol Biotechnol. 2000 Apr;2(2):179-89. Review.

PMID:
10939242
25.

Protein-coding region discovery in organisms underrepresented in databases.

Quentin Y, Voiblet C, Martin F, Fichant G.

Comput Chem. 1999 Jun 15;23(3-4):209-17.

PMID:
10404616
26.

Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.

Quentin Y, Fichant G, Denizot F.

J Mol Biol. 1999 Apr 2;287(3):467-84.

PMID:
10092453
27.

A computer filtering method to drive out tiny genes from the yeast genome.

Barry C, Fichant G, Kalogeropoulos A, Quentin Y.

Yeast. 1996 Sep 15;12(11):1163-78.

28.

A frameshift error detection algorithm for DNA sequencing projects.

Fichant GA, Quentin Y.

Nucleic Acids Res. 1995 Aug 11;23(15):2900-8.

29.

Fast identification of repetitive elements in biological sequences.

Quentin Y, Fichant GA.

J Theor Biol. 1994 Jan 7;166(1):51-61.

PMID:
8145561
31.

Identifying potential tRNA genes in genomic DNA sequences.

Fichant GA, Burks C.

J Mol Biol. 1991 Aug 5;220(3):659-71.

PMID:
1870126
32.

Statistical method for predicting protein coding regions in nucleic acid sequences.

Fichant G, Gautier C.

Comput Appl Biosci. 1987 Nov;3(4):287-95.

PMID:
3134115
33.

Compositional compartmentalization and gene composition in the genome of vertebrates.

Mouchiroud D, Fichant G, Bernardi G.

J Mol Evol. 1987;26(3):198-204.

PMID:
3129567
34.

Evaluation of the "Cobas-Bio" centrifugal microanalyzer.

de Graeve JS, Andrieu N, Valdiguié P, Fichant G.

Clin Chem. 1981 Feb;27(2):337-8. No abstract available.

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