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Items: 28

1.

Revised Interpretation of the Hain Lifescience GenoType MTBC To Differentiate Mycobacterium canettii and Members of the Mycobacterium tuberculosis Complex.

Loiseau C, Brites D, Moser I, Coll F, Pourcel C, Robbe-Austerman S, Escuyer V, Musser KA, Peacock SJ, Feuerriegel S, Kohl TA, Niemann S, Gagneux S, Köser CU.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e00159-19. doi: 10.1128/AAC.00159-19. Print 2019 Jun.

2.

Rapid microarray-based assay for detection of pyrazinamide resistant Mycobacterium tuberculosis.

Havlicek J, Dachsel B, Slickers P, Andres S, Beckert P, Feuerriegel S, Niemann S, Merker M, Labugger I.

Diagn Microbiol Infect Dis. 2019 Jun;94(2):147-154. doi: 10.1016/j.diagmicrobio.2018.12.011. Epub 2018 Dec 30.

3.

Statistical inferences for polarity identification in natural language.

Pröllochs N, Feuerriegel S, Neumann D.

PLoS One. 2018 Dec 21;13(12):e0209323. doi: 10.1371/journal.pone.0209323. eCollection 2018.

4.

Compensatory evolution drives multidrug-resistant tuberculosis in Central Asia.

Merker M, Barbier M, Cox H, Rasigade JP, Feuerriegel S, Kohl TA, Diel R, Borrell S, Gagneux S, Nikolayevskyy V, Andres S, Nübel U, Supply P, Wirth T, Niemann S.

Elife. 2018 Oct 30;7. pii: e38200. doi: 10.7554/eLife.38200.

5.

Rapid Microarray-Based Detection of Rifampin, Isoniazid, and Fluoroquinolone Resistance in Mycobacterium tuberculosis by Use of a Single Cartridge.

Havlicek J, Dachsel B, Slickers P, Andres S, Beckert P, Feuerriegel S, Niemann S, Merker M, Labugger I.

J Clin Microbiol. 2018 Jan 24;56(2). pii: e01249-17. doi: 10.1128/JCM.01249-17. Print 2018 Feb.

6.

An application of competitive reporter monitored amplification (CMA) for rapid detection of single nucleotide polymorphisms (SNPs).

Havlicek J, Rivera-Milla E, Slickers P, Andres S, Feuerriegel S, Niemann S, Merker M, Labugger I.

PLoS One. 2017 Aug 29;12(8):e0183561. doi: 10.1371/journal.pone.0183561. eCollection 2017.

7.

Mycobacterium tuberculosis resistance prediction and lineage classification from genome sequencing: comparison of automated analysis tools.

Schleusener V, Köser CU, Beckert P, Niemann S, Feuerriegel S.

Sci Rep. 2017 Apr 20;7:46327. doi: 10.1038/srep46327.

8.

Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.

Bradley P, Gordon NC, Walker TM, Dunn L, Heys S, Huang B, Earle S, Pankhurst LJ, Anson L, de Cesare M, Piazza P, Votintseva AA, Golubchik T, Wilson DJ, Wyllie DH, Diel R, Niemann S, Feuerriegel S, Kohl TA, Ismail N, Omar SV, Smith EG, Buck D, McVean G, Walker AS, Peto TE, Crook DW, Iqbal Z.

Nat Commun. 2016 Apr 20;7:11465. doi: 10.1038/ncomms11465. No abstract available.

9.

Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.

Bradley P, Gordon NC, Walker TM, Dunn L, Heys S, Huang B, Earle S, Pankhurst LJ, Anson L, de Cesare M, Piazza P, Votintseva AA, Golubchik T, Wilson DJ, Wyllie DH, Diel R, Niemann S, Feuerriegel S, Kohl TA, Ismail N, Omar SV, Smith EG, Buck D, McVean G, Walker AS, Peto TE, Crook DW, Iqbal Z.

Nat Commun. 2015 Dec 21;6:10063. doi: 10.1038/ncomms10063. Erratum in: Nat Commun. 2016;7:11465.

10.

Lab-on-Chip-Based Platform for Fast Molecular Diagnosis of Multidrug-Resistant Tuberculosis.

Cabibbe AM, Miotto P, Moure R, Alcaide F, Feuerriegel S, Pozzi G, Nikolayevskyy V, Drobniewski F, Niemann S, Reither K, Cirillo DM; TM-REST Consortium; TB-CHILD Consortium.

J Clin Microbiol. 2015 Dec;53(12):3876-80. doi: 10.1128/JCM.01824-15. Epub 2015 Aug 5.

11.

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study.

Walker TM, Kohl TA, Omar SV, Hedge J, Del Ojo Elias C, Bradley P, Iqbal Z, Feuerriegel S, Niehaus KE, Wilson DJ, Clifton DA, Kapatai G, Ip CLC, Bowden R, Drobniewski FA, Allix-Béguec C, Gaudin C, Parkhill J, Diel R, Supply P, Crook DW, Smith EG, Walker AS, Ismail N, Niemann S, Peto TEA; Modernizing Medical Microbiology (MMM) Informatics Group.

Lancet Infect Dis. 2015 Oct;15(10):1193-1202. doi: 10.1016/S1473-3099(15)00062-6. Epub 2015 Jun 23. Erratum in: Lancet Infect Dis. 2017 Nov 21;:.

12.

PhyResSE: a Web Tool Delineating Mycobacterium tuberculosis Antibiotic Resistance and Lineage from Whole-Genome Sequencing Data.

Feuerriegel S, Schleusener V, Beckert P, Kohl TA, Miotto P, Cirillo DM, Cabibbe AM, Niemann S, Fellenberg K.

J Clin Microbiol. 2015 Jun;53(6):1908-14. doi: 10.1128/JCM.00025-15. Epub 2015 Apr 8.

13.

Drug-resistance mechanisms and tuberculosis drugs.

Köser CU, Javid B, Liddell K, Ellington MJ, Feuerriegel S, Niemann S, Brown NM, Burman WJ, Abubakar I, Ismail NA, Moore D, Peacock SJ, Török ME.

Lancet. 2015 Jan 24;385(9965):305-7. doi: 10.1016/S0140-6736(14)62450-8. No abstract available.

14.

Mycobacterium tuberculosis pyrazinamide resistance determinants: a multicenter study.

Miotto P, Cabibbe AM, Feuerriegel S, Casali N, Drobniewski F, Rodionova Y, Bakonyte D, Stakenas P, Pimkina E, Augustynowicz-Kopeć E, Degano M, Ambrosi A, Hoffner S, Mansjö M, Werngren J, Rüsch-Gerdes S, Niemann S, Cirillo DM.

MBio. 2014 Oct 21;5(5):e01819-14. doi: 10.1128/mBio.01819-14.

15.

Genetic diversity within Mycobacterium tuberculosis complex impacts on the accuracy of genotypic pyrazinamide drug-susceptibility assay.

Köser CU, Comas I, Feuerriegel S, Niemann S, Gagneux S, Peacock SJ.

Tuberculosis (Edinb). 2014 Jul;94(4):451-3. doi: 10.1016/j.tube.2014.04.002. Epub 2014 Apr 24. No abstract available.

16.

Comment on: characterization of the embB gene in Mycobacterium tuberculosis isolates from Barcelona and rapid detection of main mutations related to ethambutol resistance using a low-density DNA array.

Köser CU, Bryant JM, Comas I, Feuerriegel S, Niemann S, Gagneux S, Parkhill J, Peacock SJ.

J Antimicrob Chemother. 2014 Aug;69(8):2298-9. doi: 10.1093/jac/dku101. Epub 2014 Apr 20. No abstract available.

17.

Phylogenetic polymorphisms in antibiotic resistance genes of the Mycobacterium tuberculosis complex.

Feuerriegel S, Köser CU, Niemann S.

J Antimicrob Chemother. 2014 May;69(5):1205-10. doi: 10.1093/jac/dkt535. Epub 2014 Jan 23.

PMID:
24458512
18.

Mycobacterium canettii is intrinsically resistant to both pyrazinamide and pyrazinoic acid.

Feuerriegel S, Köser CU, Richter E, Niemann S.

J Antimicrob Chemother. 2013 Jun;68(6):1439-40. doi: 10.1093/jac/dkt042. Epub 2013 Feb 26. No abstract available.

PMID:
23447141
19.

Importance of the genetic diversity within the Mycobacterium tuberculosis complex for the development of novel antibiotics and diagnostic tests of drug resistance.

Köser CU, Feuerriegel S, Summers DK, Archer JA, Niemann S.

Antimicrob Agents Chemother. 2012 Dec;56(12):6080-7. doi: 10.1128/AAC.01641-12. Epub 2012 Sep 24. Review.

20.

High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms.

Homolka S, Projahn M, Feuerriegel S, Ubben T, Diel R, Nübel U, Niemann S.

PLoS One. 2012;7(7):e39855. doi: 10.1371/journal.pone.0039855. Epub 2012 Jul 2.

21.

Sequence analysis for detection of first-line drug resistance in Mycobacterium tuberculosis strains from a high-incidence setting.

Feuerriegel S, Oberhauser B, George AG, Dafae F, Richter E, Rüsch-Gerdes S, Niemann S.

BMC Microbiol. 2012 May 30;12:90. doi: 10.1186/1471-2180-12-90.

22.

rplC T460C identified as a dominant mutation in linezolid-resistant Mycobacterium tuberculosis strains.

Beckert P, Hillemann D, Kohl TA, Kalinowski J, Richter E, Niemann S, Feuerriegel S.

Antimicrob Agents Chemother. 2012 May;56(5):2743-5. doi: 10.1128/AAC.06227-11. Epub 2012 Feb 27.

23.

Impact of Fgd1 and ddn diversity in Mycobacterium tuberculosis complex on in vitro susceptibility to PA-824.

Feuerriegel S, Köser CU, Baù D, Rüsch-Gerdes S, Summers DK, Archer JA, Marti-Renom MA, Niemann S.

Antimicrob Agents Chemother. 2011 Dec;55(12):5718-22. doi: 10.1128/AAC.05500-11. Epub 2011 Sep 19.

24.

Thr202Ala in thyA is a marker for the Latin American Mediterranean lineage of the Mycobacterium tuberculosis complex rather than para-aminosalicylic acid resistance.

Feuerriegel S, Köser C, Trübe L, Archer J, Rüsch Gerdes S, Richter E, Niemann S.

Antimicrob Agents Chemother. 2010 Nov;54(11):4794-8. doi: 10.1128/AAC.00738-10. Epub 2010 Aug 30.

25.

embCAB sequence variation among ethambutol-resistant Mycobacterium tuberculosis isolates without embB306 mutation.

Plinke C, Cox HS, Zarkua N, Karimovich HA, Braker K, Diel R, Rüsch-Gerdes S, Feuerriegel S, Niemann S.

J Antimicrob Chemother. 2010 Jul;65(7):1359-67. doi: 10.1093/jac/dkq120. Epub 2010 Apr 28.

PMID:
20427375
26.

Sequence analyses of just four genes to detect extensively drug-resistant Mycobacterium tuberculosis strains in multidrug-resistant tuberculosis patients undergoing treatment.

Feuerriegel S, Cox HS, Zarkua N, Karimovich HA, Braker K, Rüsch-Gerdes S, Niemann S.

Antimicrob Agents Chemother. 2009 Aug;53(8):3353-6. doi: 10.1128/AAC.00050-09. Epub 2009 May 26.

27.

Emergence of extensive drug resistance during treatment for multidrug-resistant tuberculosis.

Cox HS, Sibilia K, Feuerriegel S, Kalon S, Polonsky J, Khamraev AK, Rüsch-Gerdes S, Mills C, Niemann S.

N Engl J Med. 2008 Nov 27;359(22):2398-400. doi: 10.1056/NEJMc0805644. No abstract available. Erratum in: N Engl J Med. 2010 Oct 21;363(17):1682.

PMID:
19038891
28.

Role of global regulator Rma for multidrug efflux-mediated fluoroquinolone resistance in Salmonella.

Feuerriegel S, Heisig P.

Microb Drug Resist. 2008 Dec;14(4):259-63. doi: 10.1089/mdr.2008.0846.

PMID:
19018673

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