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Items: 27

1.

Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing.

Romero-Hidalgo S, Ochoa-Leyva A, Garcíarrubio A, Acuña-Alonzo V, Antúnez-Argüelles E, Balcazar-Quintero M, Barquera-Lozano R, Carnevale A, Cornejo-Granados F, Fernández-López JC, García-Herrera R, García-Ortíz H, Granados-Silvestre Á, Granados J, Guerrero-Romero F, Hernández-Lemus E, León-Mimila P, Macín-Pérez G, Martínez-Hernández A, Menjivar M, Morett E, Orozco L, Ortíz-López G, Pérez-Villatoro F, Rivera-Morales J, Riveros-McKay F, Villalobos-Comparán M, Villamil-Ramírez H, Villarreal-Molina T, Canizales-Quinteros S, Soberón X.

Nat Commun. 2017 Oct 18;8(1):1005. doi: 10.1038/s41467-017-01194-z.

2.

Objectives and methodology of BIOBADASER phase iii.

Sanchez-Piedra C, Hernández Miguel MV, Manero J, Roselló R, Sánchez-Costa JT, Rodríguez-Lozano C, Campos C, Cuende E, Fernández-Lopez JC, Bustabad S, Martín Domenech R, Pérez-Pampín E, Del Pino-Montes J, Millan-Arciniegas AM, Díaz-González F, Gómez-Reino JJ; en representación del Grupo de trabajo BIOBADASER Fase III.

Reumatol Clin. 2017 Sep 19. pii: S1699-258X(17)30225-5. doi: 10.1016/j.reuma.2017.08.001. [Epub ahead of print] English, Spanish.

3.

A Pilot Genome-Wide Association Study in Postmenopausal Mexican-Mestizo Women Implicates the RMND1/CCDC170 Locus Is Associated with Bone Mineral Density.

Villalobos-Comparán M, Jiménez-Ortega RF, Estrada K, Parra-Torres AY, González-Mercado A, Patiño N, Castillejos-López M, Quiterio M, Fernandez-López JC, Ibarra B, Romero-Hidalgo S, Salmerón J, Velázquez-Cruz R.

Int J Genomics. 2017;2017:5831020. doi: 10.1155/2017/5831020. Epub 2017 Aug 3.

4.

Heterogenous Distribution of MTHFR Gene Variants among Mestizos and Diverse Amerindian Groups from Mexico.

Contreras-Cubas C, Sánchez-Hernández BE, García-Ortiz H, Martínez-Hernández A, Barajas-Olmos F, Cid M, Mendoza-Caamal EC, Centeno-Cruz F, Ortiz-Cruz G, Jiménez-López JC, Córdova EJ, Salas-Bautista EG, Saldaña-Alvarez Y, Fernández-López JC, Mutchinick OM, Orozco L.

PLoS One. 2016 Sep 20;11(9):e0163248. doi: 10.1371/journal.pone.0163248. eCollection 2016.

5.

SNPs in NRXN1 and CHRNA5 are associated to smoking and regulation of GABAergic and glutamatergic pathways.

Pérez-Rubio G, Pérez-Rodríguez ME, Fernández-López JC, Ramírez-Venegas A, García-Colunga J, Ávila-Moreno F, Camarena A, Sansores RH, Falfán-Valencia R.

Pharmacogenomics. 2016 Jul;17(10):1145-1158. Epub 2016 Jun 29.

6.

Killer cell immunoglobulin-like receptor and human leukocyte antigen gene profiles in a cohort of HIV-infected Mexican Mestizos.

Garrido-Rodríguez D, Ávila-Ríos S, García-Morales C, Valenzuela-Ponce H, Ormsby C, Reyes-Gopar H, Fernandez-Lopez JC, Reyes-Terán G.

Immunogenetics. 2016 Oct;68(9):703-17. doi: 10.1007/s00251-016-0920-3. Epub 2016 May 30.

PMID:
27240860
7.

Genetic Variants in IL6R and ADAM19 are Associated with COPD Severity in a Mexican Mestizo Population.

Pérez-Rubio G, Silva-Zolezzi I, Fernández-López JC, Camarena Á, Velázquez-Uncal M, Morales-Mandujano F, Hernández-Zenteno Rde J, Flores-Trujillo F, Sánchez-Romero C, Velázquez-Montero A, Espinosa de Los Monteros C, Sansores RH, Ramírez-Venegas A, Falfán-Valencia R.

COPD. 2016 Oct;13(5):610-5. doi: 10.3109/15412555.2016.1161017. Epub 2016 Apr 14.

PMID:
27078193
8.

Down-Regulation of TLR and JAK/STAT Pathway Genes Is Associated with Diffuse Cutaneous Leishmaniasis: A Gene Expression Analysis in NK Cells from Patients Infected with Leishmania mexicana.

Fernández-Figueroa EA, Imaz-Rosshandler I, Castillo-Fernández JE, Miranda-Ortíz H, Fernández-López JC, Becker I, Rangel-Escareño C.

PLoS Negl Trop Dis. 2016 Mar 31;10(3):e0004570. doi: 10.1371/journal.pntd.0004570. eCollection 2016 Mar. Erratum in: PLoS Negl Trop Dis. 2016 Apr;10(4):e0004666.

9.

Current needs for human and medical genomics research infrastructure in low and middle income countries.

Forero DA, Wonkam A, Wang W, Laissue P, López-Correa C, Fernández-López JC, Mugasimangalam R, Perry G.

J Med Genet. 2016 Jul;53(7):438-40. doi: 10.1136/jmedgenet-2015-103631. Epub 2016 Jan 6. No abstract available.

PMID:
26740506
10.

Exploring the distribution of genetic markers of pharmacogenomics relevance in Brazilian and Mexican populations.

Bonifaz-Peña V, Contreras AV, Struchiner CJ, Roela RA, Furuya-Mazzotti TK, Chammas R, Rangel-Escareño C, Uribe-Figueroa L, Gómez-Vázquez MJ, McLeod HL, Hidalgo-Miranda A, Parra EJ, Fernández-López JC, Suarez-Kurtz G.

PLoS One. 2014 Nov 24;9(11):e112640. doi: 10.1371/journal.pone.0112640. eCollection 2014. Erratum in: PLoS One. 2015;10(3):e0122161.

11.

Human genetics. The genetics of Mexico recapitulates Native American substructure and affects biomedical traits.

Moreno-Estrada A, Gignoux CR, Fernández-López JC, Zakharia F, Sikora M, Contreras AV, Acuña-Alonzo V, Sandoval K, Eng C, Romero-Hidalgo S, Ortiz-Tello P, Robles V, Kenny EE, Nuño-Arana I, Barquera-Lozano R, Macín-Pérez G, Granados-Arriola J, Huntsman S, Galanter JM, Via M, Ford JG, Chapela R, Rodriguez-Cintron W, Rodríguez-Santana JR, Romieu I, Sienra-Monge JJ, del Rio Navarro B, London SJ, Ruiz-Linares A, Garcia-Herrera R, Estrada K, Hidalgo-Miranda A, Jimenez-Sanchez G, Carnevale A, Soberón X, Canizales-Quinteros S, Rangel-Villalobos H, Silva-Zolezzi I, Burchard EG, Bustamante CD.

Science. 2014 Jun 13;344(6189):1280-5. doi: 10.1126/science.1251688. Epub 2014 Jun 12.

12.

Association of a low-frequency variant in HNF1A with type 2 diabetes in a Latino population.

SIGMA Type 2 Diabetes Consortium, Estrada K, Aukrust I, Bjørkhaug L, Burtt NP, Mercader JM, García-Ortiz H, Huerta-Chagoya A, Moreno-Macías H, Walford G, Flannick J, Williams AL, Gómez-Vázquez MJ, Fernandez-Lopez JC, Martínez-Hernández A, Jiménez-Morales S, Centeno-Cruz F, Mendoza-Caamal E, Revilla-Monsalve C, Islas-Andrade S, Córdova EJ, Soberón X, González-Villalpando ME, Henderson E, Wilkens LR, Le Marchand L, Arellano-Campos O, Ordóñez-Sánchez ML, Rodríguez-Torres M, Rodríguez-Guillén R, Riba L, Najmi LA, Jacobs SB, Fennell T, Gabriel S, Fontanillas P, Hanis CL, Lehman DM, Jenkinson CP, Abboud HE, Bell GI, Cortes ML, Boehnke M, González-Villalpando C, Orozco L, Haiman CA, Tusié-Luna T, Aguilar-Salinas CA, Altshuler D, Njølstad PR, Florez JC, MacArthur DG.

JAMA. 2014 Jun 11;311(22):2305-14. doi: 10.1001/jama.2014.6511. Erratum in: JAMA. 2014 Nov 12:312(18):1932. Jiménez-Morales, Silvia[Added].

13.

CFH haplotypes and ARMS2, C2, C3, and CFB alleles show association with susceptibility to age-related macular degeneration in Mexicans.

Contreras AV, Zenteno JC, Fernández-López JC, Rodríguez-Corona U, Falfán-Valencia R, Sebastian L, Morales F, Ochoa-Contreras D, Carnevale A, Silva-Zolezzi I.

Mol Vis. 2014 Jan 14;20:105-16. eCollection 2014.

14.

Reconstructing Native American population history.

Reich D, Patterson N, Campbell D, Tandon A, Mazieres S, Ray N, Parra MV, Rojas W, Duque C, Mesa N, García LF, Triana O, Blair S, Maestre A, Dib JC, Bravi CM, Bailliet G, Corach D, Hünemeier T, Bortolini MC, Salzano FM, Petzl-Erler ML, Acuña-Alonzo V, Aguilar-Salinas C, Canizales-Quinteros S, Tusié-Luna T, Riba L, Rodríguez-Cruz M, Lopez-Alarcón M, Coral-Vazquez R, Canto-Cetina T, Silva-Zolezzi I, Fernandez-Lopez JC, Contreras AV, Jimenez-Sanchez G, Gómez-Vázquez MJ, Molina J, Carracedo A, Salas A, Gallo C, Poletti G, Witonsky DB, Alkorta-Aranburu G, Sukernik RI, Osipova L, Fedorova SA, Vasquez R, Villena M, Moreau C, Barrantes R, Pauls D, Excoffier L, Bedoya G, Rothhammer F, Dugoujon JM, Larrouy G, Klitz W, Labuda D, Kidd J, Kidd K, Di Rienzo A, Freimer NB, Price AL, Ruiz-Linares A.

Nature. 2012 Aug 16;488(7411):370-4. doi: 10.1038/nature11258. Erratum in: Nature. 2012 Nov 8;491(7423):288.

15.

Sequence analysis of mutations and translocations across breast cancer subtypes.

Banerji S, Cibulskis K, Rangel-Escareno C, Brown KK, Carter SL, Frederick AM, Lawrence MS, Sivachenko AY, Sougnez C, Zou L, Cortes ML, Fernandez-Lopez JC, Peng S, Ardlie KG, Auclair D, Bautista-Piña V, Duke F, Francis J, Jung J, Maffuz-Aziz A, Onofrio RC, Parkin M, Pho NH, Quintanar-Jurado V, Ramos AH, Rebollar-Vega R, Rodriguez-Cuevas S, Romero-Cordoba SL, Schumacher SE, Stransky N, Thompson KM, Uribe-Figueroa L, Baselga J, Beroukhim R, Polyak K, Sgroi DC, Richardson AL, Jimenez-Sanchez G, Lander ES, Gabriel SB, Garraway LA, Golub TR, Melendez-Zajgla J, Toker A, Getz G, Hidalgo-Miranda A, Meyerson M.

Nature. 2012 Jun 20;486(7403):405-9. doi: 10.1038/nature11154.

16.

Development of a panel of genome-wide ancestry informative markers to study admixture throughout the Americas.

Galanter JM, Fernandez-Lopez JC, Gignoux CR, Barnholtz-Sloan J, Fernandez-Rozadilla C, Via M, Hidalgo-Miranda A, Contreras AV, Figueroa LU, Raska P, Jimenez-Sanchez G, Zolezzi IS, Torres M, Ponte CR, Ruiz Y, Salas A, Nguyen E, Eng C, Borjas L, Zabala W, Barreto G, González FR, Ibarra A, Taboada P, Porras L, Moreno F, Bigham A, Gutierrez G, Brutsaert T, León-Velarde F, Moore LG, Vargas E, Cruz M, Escobedo J, Rodriguez-Santana J, Rodriguez-Cintrón W, Chapela R, Ford JG, Bustamante C, Seminara D, Shriver M, Ziv E, Burchard EG, Haile R, Parra E, Carracedo A; LACE Consortium.

PLoS Genet. 2012;8(3):e1002554. doi: 10.1371/journal.pgen.1002554. Epub 2012 Mar 8.

17.

Hypercontrols in genotype-phenotype analysis reveal ancestral haplotypes associated with essential hypertension.

Balam-Ortiz E, Esquivel-Villarreal A, Huerta-Hernandez D, Fernandez-Lopez JC, Alfaro-Ruiz L, Muñoz-Monroy O, Gutierrez R, Figueroa-Genis E, Carrillo K, Elizalde A, Hidalgo A, Rodriguez M, Urushihara M, Kobori H, Jimenez-Sanchez G.

Hypertension. 2012 Apr;59(4):847-53. doi: 10.1161/HYPERTENSIONAHA.111.176453. Epub 2012 Feb 27.

18.

Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing.

Lohr JG, Stojanov P, Lawrence MS, Auclair D, Chapuy B, Sougnez C, Cruz-Gordillo P, Knoechel B, Asmann YW, Slager SL, Novak AJ, Dogan A, Ansell SM, Link BK, Zou L, Gould J, Saksena G, Stransky N, Rangel-Escareño C, Fernandez-Lopez JC, Hidalgo-Miranda A, Melendez-Zajgla J, Hernández-Lemus E, Schwarz-Cruz y Celis A, Imaz-Rosshandler I, Ojesina AI, Jung J, Pedamallu CS, Lander ES, Habermann TM, Cerhan JR, Shipp MA, Getz G, Golub TR.

Proc Natl Acad Sci U S A. 2012 Mar 6;109(10):3879-84. doi: 10.1073/pnas.1121343109. Epub 2012 Feb 17.

19.

The mutational landscape of head and neck squamous cell carcinoma.

Stransky N, Egloff AM, Tward AD, Kostic AD, Cibulskis K, Sivachenko A, Kryukov GV, Lawrence MS, Sougnez C, McKenna A, Shefler E, Ramos AH, Stojanov P, Carter SL, Voet D, Cortés ML, Auclair D, Berger MF, Saksena G, Guiducci C, Onofrio RC, Parkin M, Romkes M, Weissfeld JL, Seethala RR, Wang L, Rangel-Escareño C, Fernandez-Lopez JC, Hidalgo-Miranda A, Melendez-Zajgla J, Winckler W, Ardlie K, Gabriel SB, Meyerson M, Lander ES, Getz G, Golub TR, Garraway LA, Grandis JR.

Science. 2011 Aug 26;333(6046):1157-60. doi: 10.1126/science.1208130. Epub 2011 Jul 28.

20.

Association of the genetic marker for abacavir hypersensitivity HLA-B*5701 with HCP5 rs2395029 in Mexican Mestizos.

Sanchez-Giron F, Villegas-Torres B, Jaramillo-Villafuerte K, Silva-Zolezzi I, Fernandez-Lopez JC, Jimenez-Sanchez G, Carnevale A.

Pharmacogenomics. 2011 Jun;12(6):809-14. doi: 10.2217/pgs.11.31. Epub 2011 Apr 21.

PMID:
21510768
21.

Validity of the bath ankylosing spondylitis disease activity index for the evaluation of disease activity in axial psoriatic arthritis.

Fernández-Sueiro JL, Willisch A, Pértega-Díaz S, Tasende JA, Fernández-López JC, Villar NO, Galdo F, Blanco FJ.

Arthritis Care Res (Hoboken). 2010 Jan 15;62(1):78-85. doi: 10.1002/acr.20017.

22.

Analysis of genomic diversity in Mexican Mestizo populations to develop genomic medicine in Mexico.

Silva-Zolezzi I, Hidalgo-Miranda A, Estrada-Gil J, Fernandez-Lopez JC, Uribe-Figueroa L, Contreras A, Balam-Ortiz E, del Bosque-Plata L, Velazquez-Fernandez D, Lara C, Goya R, Hernandez-Lemus E, Davila C, Barrientos E, March S, Jimenez-Sanchez G.

Proc Natl Acad Sci U S A. 2009 May 26;106(21):8611-6. doi: 10.1073/pnas.0903045106. Epub 2009 May 11.

23.

Prevalence, risk factors, and impact of knee pain suggesting osteoarthritis in Spain.

Fernandez-Lopez JC, Laffon A, Blanco FJ, Carmona L; EPISER Study Group.

Clin Exp Rheumatol. 2008 Mar-Apr;26(2):324-32.

PMID:
18565256
24.

Association of interferon regulatory factor 5 haplotypes, similar to that found in systemic lupus erythematosus, in a large subgroup of patients with rheumatoid arthritis.

Dieguez-Gonzalez R, Calaza M, Perez-Pampin E, de la Serna AR, Fernandez-Gutierrez B, Castañeda S, Largo R, Joven B, Narvaez J, Navarro F, Marenco JL, Vicario JL, Blanco FJ, Fernandez-Lopez JC, Caliz R, Collado-Escobar MD, Carreño L, Lopez-Longo J, Cañete JD, Gomez-Reino JJ, Gonzalez A.

Arthritis Rheum. 2008 May;58(5):1264-74. doi: 10.1002/art.23426.

25.

[Prevalence and risk factors in osteoarthritis].

Peña Ayala AH, Fernández-López JC.

Reumatol Clin. 2007 Oct;3 Suppl 3:S6-S12. doi: 10.1016/S1699-258X(07)73648-3. Epub 2008 Nov 13. Spanish.

26.

GPDTI: a Genetic Programming Decision Tree induction method to find epistatic effects in common complex diseases.

Estrada-Gil JK, Fernández-López JC, Hernández-Lemus E, Silva-Zolezzi I, Hidalgo-Miranda A, Jiménez-Sánchez G, Vallejo-Clemente EE.

Bioinformatics. 2007 Jul 1;23(13):i167-74.

PMID:
17646293
27.

Efficacy and safety of intraarticular hyaluronic acid in the treatment of hip osteoarthritis: a systematic review.

Fernández López JC, Ruano-Ravina A.

Osteoarthritis Cartilage. 2006 Dec;14(12):1306-11. Epub 2006 Sep 18. Review.

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