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Items: 34

1.

FRET-based analysis and molecular modeling of the human GPN-loop GTPases 1 and 3 heterodimer unveils a dominant-negative protein complex.

Cristóbal-Mondragón GR, Lara-Chacón B, Santiago Á, De-la-Rosa V, González-González R, Muñiz-Luna JA, Ladrón-de-Guevara E, Romero-Romero S, Rangel-Yescas GE, Fernández Velasco DA, Islas LD, Pastor N, Sánchez-Olea R, Calera MR.

FEBS J. 2019 Jul 12. doi: 10.1111/febs.14996. [Epub ahead of print]

PMID:
31298811
2.

Structural basis for the modulation of plant cytosolic triosephosphate isomerase activity by mimicry of redox-based modifications.

Castro-Torres E, Jiménez-Sandoval P, Romero-Romero S, Fuentes-Pascacio A, López-Castillo LM, Díaz-Quezada C, Fernández-Velasco DA, Torres-Larios A, Brieba LG.

Plant J. 2019 Apr 29. doi: 10.1111/tpj.14375. [Epub ahead of print]

PMID:
31034710
3.

Structural, thermodynamic and catalytic characterization of an ancestral triosephosphate isomerase reveal early evolutionary coupling between monomer association and function.

Schulte-Sasse M, Pardo-Ávila F, Pulido-Mayoral NO, Vázquez-Lobo A, Costas M, García-Hernández E, Rodríguez-Romero A, Fernández-Velasco DA.

FEBS J. 2019 Mar;286(5):882-900. doi: 10.1111/febs.14741. Epub 2019 Jan 15.

PMID:
30589511
4.

Structure and conformational stability of the triosephosphate isomerase from Zea mays. Comparison with the chemical unfolding pathways of other eukaryotic TIMs.

Romero-Romero S, Becerril-Sesín LA, Costas M, Rodríguez-Romero A, Fernández-Velasco DA.

Arch Biochem Biophys. 2018 Nov 15;658:66-76. doi: 10.1016/j.abb.2018.09.022. Epub 2018 Sep 24.

PMID:
30261166
5.

Insertion of antihypertensive peptides in acidic subunit from amaranth 11S induces contrasting effects in stability.

Morales-Camacho JI, Espinosa-Hernández E, Fernández-Velasco DA, Benítez-Cardoza CG, Luna-Suárez S.

Appl Microbiol Biotechnol. 2018 Nov;102(22):9595-9606. doi: 10.1007/s00253-018-9300-2. Epub 2018 Sep 12.

PMID:
30209550
6.

Localized conformational changes trigger the pH-induced fibrillogenesis of an amyloidogenic λ light chain protein.

Velázquez-López I, Valdés-García G, Romero Romero S, Maya Martínez R, Leal-Cervantes AI, Costas M, Sánchez-López R, Amero C, Pastor N, Fernández Velasco DA.

Biochim Biophys Acta Gen Subj. 2018 Jul;1862(7):1656-1666. doi: 10.1016/j.bbagen.2018.04.014. Epub 2018 Apr 15.

PMID:
29669263
7.

Massively parallel de novo protein design for targeted therapeutics.

Chevalier A, Silva DA, Rocklin GJ, Hicks DR, Vergara R, Murapa P, Bernard SM, Zhang L, Lam KH, Yao G, Bahl CD, Miyashita SI, Goreshnik I, Fuller JT, Koday MT, Jenkins CM, Colvin T, Carter L, Bohn A, Bryan CM, Fernández-Velasco DA, Stewart L, Dong M, Huang X, Jin R, Wilson IA, Fuller DH, Baker D.

Nature. 2017 Oct 5;550(7674):74-79. doi: 10.1038/nature23912. Epub 2017 Sep 27.

8.

Stabilizing an amyloidogenic λ6 light chain variable domain.

Luna-Martínez OD, Hernández-Santoyo A, Villalba-Velázquez MI, Sánchez-Alcalá R, Fernández-Velasco DA, Becerril B.

FEBS J. 2017 Nov;284(21):3702-3717. doi: 10.1111/febs.14265. Epub 2017 Oct 12.

9.

Insights on Structure and Function of a Late Embryogenesis Abundant Protein from Amaranthus cruentus: An Intrinsically Disordered Protein Involved in Protection against Desiccation, Oxidant Conditions, and Osmotic Stress.

Saucedo AL, Hernández-Domínguez EE, de Luna-Valdez LA, Guevara-García AA, Escobedo-Moratilla A, Bojorquéz-Velázquez E, Del Río-Portilla F, Fernández-Velasco DA, Barba de la Rosa AP.

Front Plant Sci. 2017 Apr 7;8:497. doi: 10.3389/fpls.2017.00497. eCollection 2017.

10.

Human Gpn1 purified from bacteria binds guanine nucleotides and hydrolyzes GTP as a protein dimer stabilized by its C-terminal tail.

González-González R, Guerra-Moreno JA, Cristóbal-Mondragón GR, Romero V, Peña-Gómez SG, Montero-Morán GM, Lara-González S, Hernández-Arana A, Fernández-Velasco DA, Calera MR, Sánchez-Olea R.

Protein Expr Purif. 2017 Apr;132:85-96. doi: 10.1016/j.pep.2017.01.009. Epub 2017 Jan 30.

PMID:
28153773
11.

Stability and aggregation propensity do not fully account for the association of various germline variable domain gene segments with light chain amyloidosis.

Garay Sánchez SA, Rodríguez Álvarez FJ, Zavala-Padilla G, Mejia-Cristobal LM, Cruz-Rangel A, Costas M, Fernández Velasco DA, Melendez-Zajgla J, Del Pozo-Yauner L.

Biol Chem. 2017 Apr 1;398(4):477-489. doi: 10.1515/hsz-2016-0178.

PMID:
27935845
12.

Correction: Reversibility and two state behaviour in the thermal unfolding of oligomeric TIM barrel proteins.

Romero-Romero S, Costas M, Rodríguez-Romero A, Fernández-Velasco DA.

Phys Chem Chem Phys. 2016 Apr 21;18(15):10647. doi: 10.1039/c6cp90084d. Epub 2016 Mar 24. No abstract available.

PMID:
27010946
13.

Site-directed mutagenesis reveals regions implicated in the stability and fiber formation of human λ3r light chains.

Villalba MI, Canul-Tec JC, Luna-Martínez OD, Sánchez-Alcalá R, Olamendi-Portugal T, Rudiño-Piñera E, Rojas S, Sánchez-López R, Fernández-Velasco DA, Becerril B.

J Biol Chem. 2015 May 22;290(21):13039. doi: 10.1074/jbc.A114.629550. No abstract available.

14.

On the molecular basis of the high affinity binding of basic amino acids to LAOBP, a periplasmic binding protein from Salmonella typhimurium.

Pulido NO, Silva DA, Tellez LA, Pérez-Hernández G, García-Hernández E, Sosa-Peinado A, Fernández-Velasco DA.

J Mol Recognit. 2015 Feb;28(2):108-16. doi: 10.1002/jmr.2434. Epub 2015 Jan 21.

PMID:
25604964
15.

Site-directed mutagenesis reveals regions implicated in the stability and fiber formation of human λ3r light chains.

Villalba MI, Canul-Tec JC, Luna-Martínez OD, Sánchez-Alcalá R, Olamendi-Portugal T, Rudiño-Piñera E, Rojas S, Sánchez-López R, Fernández-Velasco DA, Becerril B.

J Biol Chem. 2015 Jan 30;290(5):2577-92. doi: 10.1074/jbc.M114.629550. Epub 2014 Dec 11. Erratum in: J Biol Chem. 2015 May 22;290(21):13039.

16.

The N-terminal strand modulates immunoglobulin light chain fibrillogenesis.

del Pozo-Yauner L, Wall JS, González Andrade M, Sánchez-López R, Rodríguez-Ambriz SL, Pérez Carreón JI, Ochoa-Leyva A, Fernández-Velasco DA.

Biochem Biophys Res Commun. 2014 Jan 10;443(2):495-9. doi: 10.1016/j.bbrc.2013.11.123. Epub 2013 Dec 7.

PMID:
24321098
17.

Mutational and genetic determinants of λ6 light chain amyloidogenesis.

González-Andrade M, Becerril-Luján B, Sánchez-López R, Ceceña-Álvarez H, Pérez-Carreón JI, Ortiz E, Fernández-Velasco DA, del Pozo-Yauner L.

FEBS J. 2013 Dec;280(23):6173-83. doi: 10.1111/febs.12538. Epub 2013 Oct 28.

18.

Thermodynamic and kinetic characterization of a germ line human lambda6 light-chain protein: the relation between unfolding and fibrillogenesis.

Blancas-Mejia LM, Tellez LA, del Pozo-Yauner L, Becerril B, Sanchez-Ruiz JM, Fernandez-Velasco DA.

J Mol Biol. 2009 Mar 6;386(4):1153-66. doi: 10.1016/j.jmb.2008.12.069. Epub 2009 Jan 6.

PMID:
19154739
19.

Thermal unfolding of triosephosphate isomerase from Entamoeba histolytica: dimer dissociation leads to extensive unfolding.

Tellez LA, Blancas-Mejia LM, Carrillo-Nava E, Mendoza-Hernández G, Cisneros DA, Fernández-Velasco DA.

Biochemistry. 2008 Nov 4;47(44):11665-73. doi: 10.1021/bi801360k. Epub 2008 Oct 7.

PMID:
18837510
20.

Hydrophobic repacking of the dimer interface of triosephosphate isomerase by in silico design and directed evolution.

Peimbert M, Domínguez-Ramírez L, Fernández-Velasco DA.

Biochemistry. 2008 May 20;47(20):5556-64. doi: 10.1021/bi702502k. Epub 2008 Apr 26.

PMID:
18439027
21.

Influence of the germline sequence on the thermodynamic stability and fibrillogenicity of human lambda 6 light chains.

del Pozo Yauner L, Ortiz E, Sánchez R, Sánchez-López R, Güereca L, Murphy CL, Allen A, Wall JS, Fernández-Velasco DA, Solomon A, Becerril B.

Proteins. 2008 Aug;72(2):684-92. doi: 10.1002/prot.21934.

PMID:
18260098
22.

Energetics of protein homodimerization: effects of water sequestering on the formation of beta-lactoglobulin dimer.

Bello M, Pérez-Hernández G, Fernández-Velasco DA, Arreguín-Espinosa R, García-Hernández E.

Proteins. 2008 Mar;70(4):1475-87.

PMID:
17910061
23.

Thermodynamic and kinetic characterization of the association of triosephosphate isomerase: the role of diffusion.

Nájera H, Dagdug L, Fernández-Velasco DA.

Biochim Biophys Acta. 2007 Aug;1774(8):985-94. Epub 2007 Jun 19.

PMID:
17644053
24.
25.

A comparative study of biochemical and immunological properties of triosephosphate isomerase from Taenia solium and Sus scrofa.

Jiménez L, Fernández-Velasco DA, Willms K, Landa A.

J Parasitol. 2003 Apr;89(2):209-14.

PMID:
12760631
27.

Structure and inactivation of triosephosphate isomerase from Entamoeba histolytica.

Rodríguez-Romero A, Hernández-Santoyo A, del Pozo Yauner L, Kornhauser A, Fernández-Velasco DA.

J Mol Biol. 2002 Sep 27;322(4):669-75.

PMID:
12270704
28.

Unfolding of triosephosphate isomerase from Trypanosoma brucei: identification of intermediates and insight into the denaturation pathway using tryptophan mutants.

Chánez-Cárdenas ME, Fernández-Velasco DA, Vázquez-Contreras E, Coria R, Saab-Rincón G, Pérez-Montfort R.

Arch Biochem Biophys. 2002 Mar 15;399(2):117-29.

PMID:
11888197
29.

Reverse Micelle Systems Composed of Water, Triton X-100, and Phospholipids in Organic Solvents

Fernandez-Velasco DA, Rodriguez R, Vargas S, de Gomez-Puyou MT, Gomez-Puyou A.

J Colloid Interface Sci. 1998 Jan 1;197(1):29-35.

PMID:
9466840
30.

Reverse Micelle Systems Composed of Water, Triton X-100, and Phospholipids in Organic Solvents

Rodriguez R, Vargas S, Fernandez-Velasco DA.

J Colloid Interface Sci. 1998 Jan 1;197(1):21-8.

PMID:
9466839
31.

Sequencing, expression and properties of triosephosphate isomerase from Entamoeba histolytica.

Landa A, Rojo-Domínguez A, Jiménez L, Fernández-Velasco DA.

Eur J Biochem. 1997 Jul 1;247(1):348-55.

32.

Water requirements in monomer folding and dimerization of triosephosphate isomerase in reverse micelles. Intrinsic fluorescence of conformers related to reactivation.

Fernández-Velasco DA, Sepúlveda-Becerra M, Galina A, Darszon A, Tuena de Gómez-Puyou M, Gómez-Puyou A.

Biochemistry. 1995 Jan 10;34(1):361-9.

PMID:
7819219
33.

Activity of heart and muscle lactate dehydrogenases in all-aqueous systems and in organic solvents with low amounts of water. Effect of guanidine chloride.

Fernández-Velasco DA, Garza-Ramos G, Ramírez L, Shoshani L, Darszon A, Tuena de Gómez-Puyou M, Gómez-Puyou A.

Eur J Biochem. 1992 Apr 15;205(2):501-8.

34.

Enzyme activation by denaturants in organic solvent systems with a low water content.

Garza-Ramos G, Fernández-Velasco DA, Ramírez L, Shoshani L, Darszon A, Tuena de Gómez-Puyou M, Gómez-Puyou A.

Eur J Biochem. 1992 Apr 15;205(2):509-17.

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