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Items: 1 to 50 of 57

1.

Arabidopsis and Chlamydomonas phosphoribulokinase crystal structures complete the redox structural proteome of the Calvin-Benson cycle.

Gurrieri L, Del Giudice A, Demitri N, Falini G, Pavel NV, Zaffagnini M, Polentarutti M, Crozet P, Marchand CH, Henri J, Trost P, Lemaire SD, Sparla F, Fermani S.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):8048-8053. doi: 10.1073/pnas.1820639116. Epub 2019 Mar 28.

PMID:
30923119
2.

In Vitro Coral Biomineralization under Relevant Aragonite Supersaturation Conditions.

Njegić Džakula B, Fermani S, Dubinsky Z, Goffredo S, Falini G, Kralj D.

Chemistry. 2019 Mar 6. doi: 10.1002/chem.201900691. [Epub ahead of print]

PMID:
30840343
3.

Structural and Biochemical Insights into the Reactivity of Thioredoxin h1 from Chlamydomonas reinhardtii.

Marchand CH, Fermani S, Rossi J, Gurrieri L, Tedesco D, Henri J, Sparla F, Trost P, Lemaire SD, Zaffagnini M.

Antioxidants (Basel). 2019 Jan 1;8(1). pii: E10. doi: 10.3390/antiox8010010.

4.

β-Chitin samples with similar microfibril arrangement change mechanical properties varying the degree of acetylation.

Montroni D, Fermani S, Morellato K, Torri G, Naggi A, Cristofolini L, Falini G.

Carbohydr Polym. 2019 Mar 1;207:26-33. doi: 10.1016/j.carbpol.2018.11.069. Epub 2018 Nov 23.

PMID:
30600008
5.

Redox Homeostasis in Photosynthetic Organisms: Novel and Established Thiol-Based Molecular Mechanisms.

Zaffagnini M, Fermani S, Marchand CH, Costa A, Sparla F, Rouhier N, Geigenberger P, Lemaire SD, Trost P.

Antioxid Redox Signal. 2019 Feb 25. doi: 10.1089/ars.2018.7617. [Epub ahead of print]

PMID:
30499304
6.

Crystal Structure of Chloroplastic Thioredoxin f2 from Chlamydomonas reinhardtii Reveals Distinct Surface Properties.

Lemaire SD, Tedesco D, Crozet P, Michelet L, Fermani S, Zaffagnini M, Henri J.

Antioxidants (Basel). 2018 Nov 23;7(12). pii: E171. doi: 10.3390/antiox7120171.

7.

Structure and Function of Stony Coral Intraskeletal Polysaccharides.

Naggi A, Torri G, Iacomini M, Colombo Castelli G, Reggi M, Fermani S, Dubinsky Z, Goffredo S, Falini G.

ACS Omega. 2018 Mar 31;3(3):2895-2901. doi: 10.1021/acsomega.7b02053. Epub 2018 Mar 9.

8.

Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.

Fermani S, Calvaresi M, Mangini V, Falini G, Bottoni A, Natile G, Arnesano F.

Chemistry. 2018 Mar 15;24(16):4140-4148. doi: 10.1002/chem.201705543. Epub 2018 Feb 21.

PMID:
29266436
9.

Structural basis for the magnesium-dependent activation of transketolase from Chlamydomonas reinhardtii.

Pasquini M, Fermani S, Tedesco D, Sciabolini C, Crozet P, Naldi M, Henri J, Vothknecht U, Bertucci C, Lemaire SD, Zaffagnini M, Francia F.

Biochim Biophys Acta Gen Subj. 2017 Aug;1861(8):2132-2145. doi: 10.1016/j.bbagen.2017.05.021. Epub 2017 May 24.

PMID:
28552632
10.

Ecological relevance of skeletal fatty acid concentration and composition in Mediterranean scleractinian corals.

Samorì C, Caroselli E, Prada F, Reggi M, Fermani S, Dubinsky Z, Goffredo S, Falini G.

Sci Rep. 2017 May 16;7(1):1929. doi: 10.1038/s41598-017-02034-2.

11.

Shell properties of commercial clam Chamelea gallina are influenced by temperature and solar radiation along a wide latitudinal gradient.

Gizzi F, Caccia MG, Simoncini GA, Mancuso A, Reggi M, Fermani S, Brizi L, Fantazzini P, Stagioni M, Falini G, Piccinetti C, Goffredo S.

Sci Rep. 2016 Nov 2;6:36420. doi: 10.1038/srep36420.

12.

Biochemical basis of sulphenomics: how protein sulphenic acids may be stabilized by the protein microenvironment.

Trost P, Fermani S, Calvaresi M, Zaffagnini M.

Plant Cell Environ. 2017 Apr;40(4):483-490. doi: 10.1111/pce.12791. Epub 2016 Sep 7. Review.

PMID:
27390911
13.

Tuning Cysteine Reactivity and Sulfenic Acid Stability by Protein Microenvironment in Glyceraldehyde-3-Phosphate Dehydrogenases of Arabidopsis thaliana.

Zaffagnini M, Fermani S, Calvaresi M, Orrù R, Iommarini L, Sparla F, Falini G, Bottoni A, Trost P.

Antioxid Redox Signal. 2016 Mar 20;24(9):502-17. doi: 10.1089/ars.2015.6417. Epub 2016 Feb 1.

PMID:
26650776
14.

Unravelling the shape and structural assembly of the photosynthetic GAPDH-CP12-PRK complex from Arabidopsis thaliana by small-angle X-ray scattering analysis.

Del Giudice A, Pavel NV, Galantini L, Falini G, Trost P, Fermani S, Sparla F.

Acta Crystallogr D Biol Crystallogr. 2015 Dec 1;71(Pt 12):2372-85. doi: 10.1107/S1399004715018520. Epub 2015 Nov 26.

PMID:
26627646
15.

Calcite single crystals as hosts for atomic-scale entrapment and slow release of drugs.

Magnabosco G, Di Giosia M, Polishchuk I, Weber E, Fermani S, Bottoni A, Zerbetto F, Pelicci PG, Pokroy B, Rapino S, Falini G, Calvaresi M.

Adv Healthc Mater. 2015 Sep 16;4(13):1899. doi: 10.1002/adhm.201500631. No abstract available.

PMID:
26379220
16.

Coral biomineralization: A focus on intra-skeletal organic matrix and calcification.

Falini G, Fermani S, Goffredo S.

Semin Cell Dev Biol. 2015 Oct;46:17-26. doi: 10.1016/j.semcdb.2015.09.005. Epub 2015 Sep 5. Review.

PMID:
26344100
17.

Gains and losses of coral skeletal porosity changes with ocean acidification acclimation.

Fantazzini P, Mengoli S, Pasquini L, Bortolotti V, Brizi L, Mariani M, Di Giosia M, Fermani S, Capaccioni B, Caroselli E, Prada F, Zaccanti F, Levy O, Dubinsky Z, Kaandorp JA, Konglerd P, Hammel JU, Dauphin Y, Cuif JP, Weaver JC, Fabricius KE, Wagermaier W, Fratzl P, Falini G, Goffredo S.

Nat Commun. 2015 Jul 17;6:7785. doi: 10.1038/ncomms8785.

18.

Calcite Single Crystals as Hosts for Atomic-Scale Entrapment and Slow Release of Drugs.

Magnabosco G, Di Giosia M, Polishchuk I, Weber E, Fermani S, Bottoni A, Zerbetto F, Pelicci PG, Pokroy B, Rapino S, Falini G, Calvaresi M.

Adv Healthc Mater. 2015 Jul 15;4(10):1510-6. doi: 10.1002/adhm.201500170. Epub 2015 Jun 1. Erratum in: Adv Healthc Mater. 2015 Sep 16;4(13):1899.

PMID:
26033854
19.

Customizing properties of β-chitin in squid pen (gladius) by chemical treatments.

Ianiro A, Giosia MD, Fermani S, Samorì C, Barbalinardo M, Valle F, Pellegrini G, Biscarini F, Zerbetto F, Calvaresi M, Falini G.

Mar Drugs. 2014 Dec 15;12(12):5979-92. doi: 10.3390/md12125979.

20.

Evidence of structural variability among synthetic and biogenic vaterite.

Falini G, Fermani S, Reggi M, Njegić Džakula B, Kralj D.

Chem Commun (Camb). 2014 Dec 18;50(97):15370-3. doi: 10.1039/c4cc05054a. Epub 2014 Oct 28.

PMID:
25350140
21.

Thioredoxin-dependent redox regulation of chloroplastic phosphoglycerate kinase from Chlamydomonas reinhardtii.

Morisse S, Michelet L, Bedhomme M, Marchand CH, Calvaresi M, Trost P, Fermani S, Zaffagnini M, Lemaire SD.

J Biol Chem. 2014 Oct 24;289(43):30012-24. doi: 10.1074/jbc.M114.597997. Epub 2014 Sep 8.

22.

Biomineralization control related to population density under ocean acidification.

Goffredo S, Prada F, Caroselli E, Capaccioni B, Zaccanti F, Pasquini L, Fantazzini P, Fermani S, Reggi M, Levy O, Fabricius KE, Dubinsky Z, Falini G.

Nat Clim Chang. 2014 Jul 1;4(7):593-597.

23.

Analytical pyrolysis-based study on intra-skeletal organic matrices from Mediterranean corals.

Adamiano A, Goffredo S, Dubinsky Z, Levy O, Fermani S, Fabbri D, Falini G.

Anal Bioanal Chem. 2014 Sep;406(24):6021-33.

PMID:
25015043
24.

C60@Lysozyme: direct observation by nuclear magnetic resonance of a 1:1 fullerene protein adduct.

Calvaresi M, Arnesano F, Bonacchi S, Bottoni A, Calò V, Conte S, Falini G, Fermani S, Losacco M, Montalti M, Natile G, Prodi L, Sparla F, Zerbetto F.

ACS Nano. 2014 Feb 25;8(2):1871-7. doi: 10.1021/nn4063374. Epub 2014 Jan 31.

PMID:
24450489
25.

Redox regulation of the Calvin-Benson cycle: something old, something new.

Michelet L, Zaffagnini M, Morisse S, Sparla F, Pérez-Pérez ME, Francia F, Danon A, Marchand CH, Fermani S, Trost P, Lemaire SD.

Front Plant Sci. 2013 Nov 25;4:470. doi: 10.3389/fpls.2013.00470. Review.

26.

Plant cytoplasmic GAPDH: redox post-translational modifications and moonlighting properties.

Zaffagnini M, Fermani S, Costa A, Lemaire SD, Trost P.

Front Plant Sci. 2013 Nov 12;4:450. doi: 10.3389/fpls.2013.00450. eCollection 2013. Review.

27.

Skin lipid structure controls water permeability in snake molts.

Torri C, Mangoni A, Teta R, Fattorusso E, Alibardi L, Fermani S, Bonacini I, Gazzano M, Burghammer M, Fabbri D, Falini G.

J Struct Biol. 2014 Jan;185(1):99-106. doi: 10.1016/j.jsb.2013.10.007. Epub 2013 Oct 21.

PMID:
24157843
28.

High-resolution crystal structure and redox properties of chloroplastic triosephosphate isomerase from Chlamydomonas reinhardtii.

Zaffagnini M, Michelet L, Sciabolini C, Di Giacinto N, Morisse S, Marchand CH, Trost P, Fermani S, Lemaire SD.

Mol Plant. 2014 Jan;7(1):101-20. doi: 10.1093/mp/sst139. Epub 2013 Oct 24.

29.

Conformational selection of ubiquitin quaternary structures driven by zinc ions.

Fermani S, Falini G, Calvaresi M, Bottoni A, Calò V, Mangini V, Arnesano F, Natile G.

Chemistry. 2013 Nov 11;19(46):15480-4. doi: 10.1002/chem.201302229. Epub 2013 Oct 10.

PMID:
24123543
30.

Morphological and mechanical characterization of composite calcite/SWCNT-COOH single crystals.

Calvaresi M, Falini G, Pasquini L, Reggi M, Fermani S, Gazzadi GC, Frabboni S, Zerbetto F.

Nanoscale. 2013 Aug 7;5(15):6944-9. doi: 10.1039/c3nr01568h.

PMID:
23787771
31.

Control of aragonite deposition in colonial corals by intra-skeletal macromolecules.

Falini G, Reggi M, Fermani S, Sparla F, Goffredo S, Dubinsky Z, Levi O, Dauphin Y, Cuif JP.

J Struct Biol. 2013 Aug;183(2):226-38. doi: 10.1016/j.jsb.2013.05.001. Epub 2013 May 10.

PMID:
23669627
32.

Shaping calcite crystals by means of comb polyelectrolytes having neutral hydrophilic teeth.

Malferrari D, Fermani S, Galletti P, Goisis M, Tagliavini E, Falini G.

Langmuir. 2013 Feb 12;29(6):1938-47. doi: 10.1021/la304618f. Epub 2013 Jan 31.

PMID:
23320460
33.

Structural changes in a protein fragment from abalone shell during the precipitation of calcium carbonate.

Adamiano A, Bonacchi S, Calonghi N, Fabbri D, Falini G, Fermani S, Genovese D, Kralj D, Montalti M, Njegić Džakula B, Prodi L, Sartor G.

Chemistry. 2012 Nov 5;18(45):14367-74. doi: 10.1002/chem.201201863. Epub 2012 Sep 20.

PMID:
22996327
34.

Conformational selection and folding-upon-binding of intrinsically disordered protein CP12 regulate photosynthetic enzymes assembly.

Fermani S, Trivelli X, Sparla F, Thumiger A, Calvaresi M, Marri L, Falini G, Zerbetto F, Trost P.

J Biol Chem. 2012 Jun 15;287(25):21372-83. doi: 10.1074/jbc.M112.350355. Epub 2012 Apr 18.

35.

Fullerenol entrapment in calcite microspheres.

Calvaresi M, Falini G, Bonacchi S, Genovese D, Fermani S, Montalti M, Prodi L, Zerbetto F.

Chem Commun (Camb). 2011 Oct 14;47(38):10662-4. doi: 10.1039/c1cc13680a. Epub 2011 Sep 1.

PMID:
21881667
36.

Crystallographic analysis of metal-ion binding to human ubiquitin.

Arnesano F, Belviso BD, Caliandro R, Falini G, Fermani S, Natile G, Siliqi D.

Chemistry. 2011 Feb 1;17(5):1569-78. doi: 10.1002/chem.201001617. Epub 2010 Dec 10.

PMID:
21268159
37.

The interstitial crystal-nucleating sheet in molluscan Haliotis rufescens shell: a bio-polymeric composite.

Falini G, Sartor G, Fabbri D, Vergni P, Fermani S, Belcher AM, Stucky GD, Morse DE.

J Struct Biol. 2011 Jan;173(1):128-37. doi: 10.1016/j.jsb.2010.08.002. Epub 2010 Aug 9.

PMID:
20705141
38.

Structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase (isoform A4) from Arabidopsis thaliana in complex with NAD.

Fermani S, Sparla F, Marri L, Thumiger A, Pupillo P, Falini G, Trost P.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1;66(Pt 6):621-6. doi: 10.1107/S1744309110013527. Epub 2010 May 25.

39.

Crystallization and preliminary X-ray diffraction data analysis of stenodactylin, a highly toxic type 2 ribosome-inactivating protein from Adenia stenodactyla.

Tosi G, Fermani S, Falini G, Polito L, Bortolotti M, Bolognesi A.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jan 1;66(Pt 1):51-3. doi: 10.1107/S1744309109047654. Epub 2009 Dec 25.

40.

Structure/function studies on two type 1 ribosome inactivating proteins: Bouganin and lychnin.

Fermani S, Tosi G, Farini V, Polito L, Falini G, Ripamonti A, Barbieri L, Chambery A, Bolognesi A.

J Struct Biol. 2009 Nov;168(2):278-87. doi: 10.1016/j.jsb.2009.07.010. Epub 2009 Jul 16.

PMID:
19616098
41.

Keratin-lipid structural organization in the corneous layer of snake.

Ripamonti A, Alibardi L, Falini G, Fermani S, Gazzano M.

Biopolymers. 2009 Dec;91(12):1172-81. doi: 10.1002/bip.21184.

PMID:
19280640
42.

Structural probing of Zn(II), Cd(II) and Hg(II) binding to human ubiquitin.

Falini G, Fermani S, Tosi G, Arnesano F, Natile G.

Chem Commun (Camb). 2008 Dec 7;(45):5960-2. doi: 10.1039/b813463d. Epub 2008 Oct 9.

PMID:
19030552
43.

Crystallization of proteins on functionalized surfaces.

Tosi G, Fermani S, Falini G, Gavira Gallardo JA, García Ruiz JM.

Acta Crystallogr D Biol Crystallogr. 2008 Oct;64(Pt 10):1054-61. doi: 10.1107/S0907444908025079. Epub 2008 Sep 19.

PMID:
18931412
44.

Helical domain collagen substrates mineralization in simulated body fluid.

Falini G, Fermani S, Palazzo B, Roveri N.

J Biomed Mater Res A. 2008 Nov;87(2):470-6. doi: 10.1002/jbm.a.31771.

PMID:
18186062
45.

Molecular mechanism of thioredoxin regulation in photosynthetic A2B2-glyceraldehyde-3-phosphate dehydrogenase.

Fermani S, Sparla F, Falini G, Martelli PL, Casadio R, Pupillo P, Ripamonti A, Trost P.

Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):11109-14. Epub 2007 Jun 15.

46.

Thioredoxin-dependent regulation of photosynthetic glyceraldehyde-3-phosphate dehydrogenase: autonomous vs. CP12-dependent mechanisms.

Trost P, Fermani S, Marri L, Zaffagnini M, Falini G, Scagliarini S, Pupillo P, Sparla F.

Photosynth Res. 2006 Sep;89(2-3):263-75. Epub 2006 Sep 22. Review.

PMID:
17031544
47.

Supramolecular assembly of amelogenin nanospheres into birefringent microribbons.

Du C, Falini G, Fermani S, Abbott C, Moradian-Oldak J.

Science. 2005 Mar 4;307(5714):1450-4. Erratum in: Science. 2005 Sep 30;309(5744):2166.

48.

The 1.4 anstroms structure of dianthin 30 indicates a role of surface potential at the active site of type 1 ribosome inactivating proteins.

Fermani S, Falini G, Ripamonti A, Polito L, Stirpe F, Bolognesi A.

J Struct Biol. 2005 Feb;149(2):204-12.

PMID:
15681236
49.

Coenzyme site-directed mutants of photosynthetic A4-GAPDH show selectively reduced NADPH-dependent catalysis, similar to regulatory AB-GAPDH inhibited by oxidized thioredoxin.

Sparla F, Fermani S, Falini G, Zaffagnini M, Ripamonti A, Sabatino P, Pupillo P, Trost P.

J Mol Biol. 2004 Jul 23;340(5):1025-37.

PMID:
15236965
50.

Chitin mineralization.

Falini G, Fermani S.

Tissue Eng. 2004 Jan-Feb;10(1-2):1-6. Review.

PMID:
15009925

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