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Items: 15

1.

Site-specific aptamer inhibitors of Thermus RNA polymerase.

Miropolskaya N, Feklistov A, Nikiforov V, Kulbachinskiy A.

Biochem Biophys Res Commun. 2018 Jan 1;495(1):110-115. doi: 10.1016/j.bbrc.2017.10.151. Epub 2017 Oct 31.

PMID:
29097207
2.

6S RNA Mimics B-Form DNA to Regulate Escherichia coli RNA Polymerase.

Chen J, Wassarman KM, Feng S, Leon K, Feklistov A, Winkelman JT, Li Z, Walz T, Campbell EA, Darst SA.

Mol Cell. 2017 Oct 19;68(2):388-397.e6. doi: 10.1016/j.molcel.2017.09.006. Epub 2017 Oct 5.

3.

RNA polymerase motions during promoter melting.

Feklistov A, Bae B, Hauver J, Lass-Napiorkowska A, Kalesse M, Glaus F, Altmann KH, Heyduk T, Landick R, Darst SA.

Science. 2017 May 26;356(6340):863-866. doi: 10.1126/science.aam7858.

4.

Structure of a bacterial RNA polymerase holoenzyme open promoter complex.

Bae B, Feklistov A, Lass-Napiorkowska A, Landick R, Darst SA.

Elife. 2015 Sep 8;4. doi: 10.7554/eLife.08504.

5.

Bacterial sigma factors: a historical, structural, and genomic perspective.

Feklístov A, Sharon BD, Darst SA, Gross CA.

Annu Rev Microbiol. 2014;68:357-76. doi: 10.1146/annurev-micro-092412-155737. Epub 2014 Jun 18. Review.

PMID:
25002089
6.

Promoter melting by an alternative σ, one base at a time.

Darst SA, Feklistov A, Gross CA.

Nat Struct Mol Biol. 2014 Apr;21(4):350-1. doi: 10.1038/nsmb.2798. No abstract available.

7.

Crystallographic analysis of an RNA polymerase σ-subunit fragment complexed with -10 promoter element ssDNA: quadruplex formation as a possible tool for engineering crystal contacts in protein-ssDNA complexes.

Feklistov A, Darst SA.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):950-5. doi: 10.1107/S1744309113020368. Epub 2013 Aug 19.

8.

RNA polymerase: in search of promoters.

Feklistov A.

Ann N Y Acad Sci. 2013 Jul;1293:25-32. doi: 10.1111/nyas.12197. Epub 2013 Jul 15. Review.

9.

Single-strand promoter traps for bacterial RNA polymerase.

Pupov D, Esyunina D, Feklistov A, Kulbachinskiy A.

Biochem J. 2013 Jun 1;452(2):241-8. doi: 10.1042/BJ20130069.

PMID:
23517087
10.

Structural basis for promoter-10 element recognition by the bacterial RNA polymerase σ subunit.

Feklistov A, Darst SA.

Cell. 2011 Dec 9;147(6):1257-69. doi: 10.1016/j.cell.2011.10.041. Epub 2011 Dec 1.

11.

Promoter recognition by bacterial alternative sigma factors: the price of high selectivity?

Feklistov A, Darst SA.

Genes Dev. 2009 Oct 15;23(20):2371-5. doi: 10.1101/gad.1862609.

12.

Rifamycins do not function by allosteric modulation of binding of Mg2+ to the RNA polymerase active center.

Feklistov A, Mekler V, Jiang Q, Westblade LF, Irschik H, Jansen R, Mustaev A, Darst SA, Ebright RH.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14820-5. doi: 10.1073/pnas.0802822105. Epub 2008 Sep 11.

13.

Specific recognition of the -10 promoter element by the free RNA polymerase sigma subunit.

Sevostyanova A, Feklistov A, Barinova N, Heyduk E, Bass I, Klimasauskas S, Heyduk T, Kulbachinskiy A.

J Biol Chem. 2007 Jul 27;282(30):22033-9. Epub 2007 May 29.

14.

A basal promoter element recognized by free RNA polymerase sigma subunit determines promoter recognition by RNA polymerase holoenzyme.

Feklistov A, Barinova N, Sevostyanova A, Heyduk E, Bass I, Vvedenskaya I, Kuznedelov K, Merkiene E, Stavrovskaya E, Klimasauskas S, Nikiforov V, Heyduk T, Severinov K, Kulbachinskiy A.

Mol Cell. 2006 Jul 7;23(1):97-107. Epub 2006 Jun 22.

15.

Aptamers to Escherichia coli core RNA polymerase that sense its interaction with rifampicin, sigma-subunit and GreB.

Kulbachinskiy A, Feklistov A, Krasheninnikov I, Goldfarb A, Nikiforov V.

Eur J Biochem. 2004 Dec;271(23-24):4921-31.

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