Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 48

1.

Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma.

Shamir ER, Devine WP, Pekmezci M, Umetsu SE, Krings G, Federman S, Cho SJ, Saunders TA, Jen KY, Bergsland E, Jones K, Kim GE, Kakar S, Chiu CY, Joseph NM.

Mod Pathol. 2019 Feb;32(2):290-305. doi: 10.1038/s41379-018-0131-6. Epub 2018 Sep 20.

PMID:
30237525
2.

Reconciling species diversity in a tropical plant clade (Canarium, Burseraceae).

Federman S, Donoghue MJ, Daly DC, Eaton DAR.

PLoS One. 2018 Jun 15;13(6):e0198882. doi: 10.1371/journal.pone.0198882. eCollection 2018.

3.

Polyoma virus-associated carcinomas of the urologic tract: a clinicopathologic and molecular study.

Sirohi D, Vaske C, Sanborn Z, Smith SC, Don MD, Lindsey KG, Federman S, Vankalakunti M, Koo J, Bose S, Peralta-Venturina M, Ziffle JV, Grenert JP, Miller S, Chiu C, Amin MB, Simko JP, Stohr BA, Luthringer DJ.

Mod Pathol. 2018 Sep;31(9):1429-1441. doi: 10.1038/s41379-018-0065-z. Epub 2018 May 15.

PMID:
29765141
4.

A Child With Intermittent Headaches and Eosinophilic Meningitis.

Saporta-Keating SR, Simões EAF, Yu G, Federman S, Mirsky D, Dominguez SR, Chiu CY, Messacar K.

J Pediatric Infect Dis Soc. 2018 Dec 3;7(4):355-357. doi: 10.1093/jpids/piy005. No abstract available.

PMID:
29438532
5.

Nanopore DNA Sequencing and Genome Assembly on the International Space Station.

Castro-Wallace SL, Chiu CY, John KK, Stahl SE, Rubins KH, McIntyre ABR, Dworkin JP, Lupisella ML, Smith DJ, Botkin DJ, Stephenson TA, Juul S, Turner DJ, Izquierdo F, Federman S, Stryke D, Somasekar S, Alexander N, Yu G, Mason CE, Burton AS.

Sci Rep. 2017 Dec 21;7(1):18022. doi: 10.1038/s41598-017-18364-0.

6.

Cradles and museums of Antarctic teleost biodiversity.

Dornburg A, Federman S, Lamb AD, Jones CD, Near TJ.

Nat Ecol Evol. 2017 Sep;1(9):1379-1384. doi: 10.1038/s41559-017-0239-y. Epub 2017 Jul 24.

PMID:
29046532
7.

Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.

Chiu CY, Coffey LL, Murkey J, Symmes K, Sample HA, Wilson MR, Naccache SN, Arevalo S, Somasekar S, Federman S, Stryke D, Vespa P, Schiller G, Messenger S, Humphries R, Miller S, Klausner JD.

Emerg Infect Dis. 2017 Oct;23(10):1964-1968. doi: 10.3201/eid2310.161986.

8.

The eukaryotic gut virome in hematopoietic stem cell transplantation: new clues in enteric graft-versus-host disease.

Legoff J, Resche-Rigon M, Bouquet J, Robin M, Naccache SN, Mercier-Delarue S, Federman S, Samayoa E, Rousseau C, Piron P, Kapel N, Simon F, Socié G, Chiu CY.

Nat Med. 2017 Sep;23(9):1080-1085. doi: 10.1038/nm.4380. Epub 2017 Jul 31.

PMID:
28759053
9.

The case for implementing the levels of prevention model: Opiate abuse on American college campuses.

Daniels-Witt Q, Thompson A, Glassman T, Federman S, Bott K.

J Am Coll Health. 2017 Oct;65(7):518-524. doi: 10.1080/07448481.2017.1341900. Epub 2017 Jun 16.

PMID:
28622135
10.

RNA-Seq Analysis of Gene Expression, Viral Pathogen, and B-Cell/T-Cell Receptor Signatures in Complex Chronic Disease.

Bouquet J, Gardy JL, Brown S, Pfeil J, Miller RR, Morshed M, Avina-Zubieta A, Shojania K, McCabe M, Parker S, Uyaguari M, Federman S, Tang P, Steiner T, Otterstater M, Holt R, Moore R, Chiu CY, Patrick DM; Complex Chronic Disease Study Group.

Clin Infect Dis. 2017 Feb 15;64(4):476-481. doi: 10.1093/cid/ciw767.

11.

The Paucity of Frugivores in Madagascar May Not Be Due to Unpredictable Temperatures or Fruit Resources.

Federman S, Sinnott-Armstrong M, Baden AL, Chapman CA, Daly DC, Richard AR, Valenta K, Donoghue MJ.

PLoS One. 2017 Jan 13;12(1):e0168943. doi: 10.1371/journal.pone.0168943. eCollection 2017.

12.

Cryptic species diversity in sub-Antarctic islands: A case study of Lepidonotothen.

Dornburg A, Federman S, Eytan RI, Near TJ.

Mol Phylogenet Evol. 2016 Nov;104:32-43. doi: 10.1016/j.ympev.2016.07.013. Epub 2016 Jul 12.

PMID:
27421566
13.

Implications of lemuriform extinctions for the Malagasy flora.

Federman S, Dornburg A, Daly DC, Downie A, Perry GH, Yoder AD, Sargis EJ, Richard AF, Donoghue MJ, Baden AL.

Proc Natl Acad Sci U S A. 2016 May 3;113(18):5041-6. doi: 10.1073/pnas.1523825113. Epub 2016 Apr 11.

14.

Longitudinal Transcriptome Analysis Reveals a Sustained Differential Gene Expression Signature in Patients Treated for Acute Lyme Disease.

Bouquet J, Soloski MJ, Swei A, Cheadle C, Federman S, Billaud JN, Rebman AW, Kabre B, Halpert R, Boorgula M, Aucott JN, Chiu CY.

MBio. 2016 Feb 12;7(1):e00100-16. doi: 10.1128/mBio.00100-16.

15.

Erratum to: Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing.

Greninger AL, Messacar K, Dunnebacke T, Naccache SN, Federman S, Bouquet J, Mirsky D, Nomura Y, Yagi S, Glaser C, Vollmer M, Press CA, Kleinschmidt-DeMasters BK, Dominguez SR, Chiu CY.

Genome Med. 2016 Jan 11;8(1):1. doi: 10.1186/s13073-015-0257-9. No abstract available.

16.

Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing.

Greninger AL, Messacar K, Dunnebacke T, Naccache SN, Federman S, Bouquet J, Mirsky D, Nomura Y, Yagi S, Glaser C, Vollmer M, Press CA, Kleinschmidt-DeMasters BK, Dominguez SR, Chiu CY.

Genome Med. 2015 Dec 1;7:113. doi: 10.1186/s13073-015-0235-2. Erratum in: Genome Med. 2016;8(1):1. Klenschmidt-DeMasters, Bette K [corrected to Kleinschmidt-DeMasters, Bette K].

17.

Utility of Metagenomic Next-Generation Sequencing for Characterization of HIV and Human Pegivirus Diversity.

Luk KC, Berg MG, Naccache SN, Kabre B, Federman S, Mbanya D, Kaptué L, Chiu CY, Brennan CA, Hackett J Jr.

PLoS One. 2015 Nov 23;10(11):e0141723. doi: 10.1371/journal.pone.0141723. eCollection 2015.

18.

The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome.

Federman S, Dornburg A, Downie A, Richard AF, Daly DC, Donoghue MJ.

BMC Evol Biol. 2015 Oct 5;15:216. doi: 10.1186/s12862-015-0483-1.

19.

Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.

Greninger AL, Naccache SN, Federman S, Yu G, Mbala P, Bres V, Stryke D, Bouquet J, Somasekar S, Linnen JM, Dodd R, Mulembakani P, Schneider BS, Muyembe-Tamfum JJ, Stramer SL, Chiu CY.

Genome Med. 2015 Sep 29;7:99. doi: 10.1186/s13073-015-0220-9.

20.

A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study.

Greninger AL, Naccache SN, Messacar K, Clayton A, Yu G, Somasekar S, Federman S, Stryke D, Anderson C, Yagi S, Messenger S, Wadford D, Xia D, Watt JP, Van Haren K, Dominguez SR, Glaser C, Aldrovandi G, Chiu CY.

Lancet Infect Dis. 2015 Jun;15(6):671-82. doi: 10.1016/S1473-3099(15)70093-9. Epub 2015 Mar 31.

21.

An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data.

Deng X, Naccache SN, Ng T, Federman S, Li L, Chiu CY, Delwart EL.

Nucleic Acids Res. 2015 Apr 20;43(7):e46. doi: 10.1093/nar/gkv002. Epub 2015 Jan 13.

22.

Diagnosis of neuroinvasive astrovirus infection in an immunocompromised adult with encephalitis by unbiased next-generation sequencing.

Naccache SN, Peggs KS, Mattes FM, Phadke R, Garson JA, Grant P, Samayoa E, Federman S, Miller S, Lunn MP, Gant V, Chiu CY.

Clin Infect Dis. 2015 Mar 15;60(6):919-23. doi: 10.1093/cid/ciu912. Epub 2015 Jan 7.

23.

Observation of a new electronic state of CO perturbing W ¹Π(v=1).

Heays AN, Eidelsberg M, Stark G, Lemaire JL, Gavilan L, Federman SR, Lewis BR, Lyons JR, de Oliveira N, Joyeux D.

J Chem Phys. 2014 Oct 14;141(14):144311. doi: 10.1063/1.4897326.

PMID:
25318726
24.

A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples.

Naccache SN, Federman S, Veeraraghavan N, Zaharia M, Lee D, Samayoa E, Bouquet J, Greninger AL, Luk KC, Enge B, Wadford DA, Messenger SL, Genrich GL, Pellegrino K, Grard G, Leroy E, Schneider BS, Fair JN, Martínez MA, Isa P, Crump JA, DeRisi JL, Sittler T, Hackett J Jr, Miller S, Chiu CY.

Genome Res. 2014 Jul;24(7):1180-92. doi: 10.1101/gr.171934.113. Epub 2014 Jun 4.

25.

Actionable diagnosis of neuroleptospirosis by next-generation sequencing.

Wilson MR, Naccache SN, Samayoa E, Biagtan M, Bashir H, Yu G, Salamat SM, Somasekar S, Federman S, Miller S, Sokolic R, Garabedian E, Candotti F, Buckley RH, Reed KD, Meyer TL, Seroogy CM, Galloway R, Henderson SL, Gern JE, DeRisi JL, Chiu CY.

N Engl J Med. 2014 Jun 19;370(25):2408-17. doi: 10.1056/NEJMoa1401268. Epub 2014 Jun 4.

26.

High-resolution study of 13C16O A-X(v' = 0-9) bands using the VUV-FTS at SOLEIL: revised term values.

Gavilan L, Lemaire JL, Eidelsberg M, Federman SR, Stark G, Heays AN, Fillion JH, Lyons JR, de Oliveira N.

J Phys Chem A. 2013 Oct 3;117(39):9644-52. doi: 10.1021/jp312338z. Epub 2013 Apr 25.

PMID:
23570651
27.

The impact of recent advances in laboratory astrophysics on our understanding of the cosmos.

Savin DW, Brickhouse NS, Cowan JJ, Drake RP, Federman SR, Ferland GJ, Frank A, Gudipati MS, Haxton WC, Herbst E, Profumo S, Salama F, Ziurys LM, Zweibel EG.

Rep Prog Phys. 2012 Mar;75(3):036901. doi: 10.1088/0034-4885/75/3/036901. Epub 2012 Feb 22.

PMID:
22790424
28.

Pleckstrin homology domain-interacting protein (PHIP) as a marker and mediator of melanoma metastasis.

De Semir D, Nosrati M, Bezrookove V, Dar AA, Federman S, Bienvenu G, Venna S, Rangel J, Climent J, Meyer Tamgüney TM, Thummala S, Tong S, Leong SP, Haqq C, Billings P, Miller JR 3rd, Sagebiel RW, Debs R, Kashani-Sabet M.

Proc Natl Acad Sci U S A. 2012 May 1;109(18):7067-72. doi: 10.1073/pnas.1119949109. Epub 2012 Apr 17.

29.

Gene expression and biological pathways in tissue of men with prostate cancer in a randomized clinical trial of lycopene and fish oil supplementation.

Magbanua MJ, Roy R, Sosa EV, Weinberg V, Federman S, Mattie MD, Hughes-Fulford M, Simko J, Shinohara K, Haqq CM, Carroll PR, Chan JM.

PLoS One. 2011;6(9):e24004. doi: 10.1371/journal.pone.0024004. Epub 2011 Sep 1.

30.

Nutritional supplements, COX-2 and IGF-1 expression in men on active surveillance for prostate cancer.

Chan JM, Weinberg V, Magbanua MJ, Sosa E, Simko J, Shinohara K, Federman S, Mattie M, Hughes-Fulford M, Haqq C, Carroll PR.

Cancer Causes Control. 2011 Jan;22(1):141-50. doi: 10.1007/s10552-010-9684-5. Epub 2010 Nov 20.

31.

Functional modulation of IGF-binding protein-3 expression in melanoma.

Dar AA, Majid S, Nosrati M, de Semir D, Federman S, Kashani-Sabet M.

J Invest Dermatol. 2010 Aug;130(8):2071-9. doi: 10.1038/jid.2010.70. Epub 2010 Apr 1.

32.

Metabolic, pathologic, and genetic analysis of prostate tissues: quantitative evaluation of histopathologic and mRNA integrity after HR-MAS spectroscopy.

Santos CF, Kurhanewicz J, Tabatabai ZL, Simko JP, Keshari KR, Gbegnon A, Santos RD, Federman S, Shinohara K, Carroll PR, Haqq CM, Swanson MG.

NMR Biomed. 2010 May;23(4):391-8. doi: 10.1002/nbm.1474. Epub 2009 Dec 23.

33.

A comparison of RNA amplification techniques at sub-nanogram input concentration.

Lang JE, Magbanua MJ, Scott JH, Makrigiorgos GM, Wang G, Federman S, Esserman LJ, Park JW, Haqq CM.

BMC Genomics. 2009 Jul 20;10:326. doi: 10.1186/1471-2164-10-326.

34.

Comment on "Experimental test of self-shielding in vacuum ultraviolet photodissociation of CO".

Federman SR, Young ED.

Science. 2009 Jun 19;324(5934):1516; author reply 1516. doi: 10.1126/science.1169923.

35.

Reversible transition between alpha-helix and beta-sheet conformation of a transmembrane domain.

Yassine W, Taib N, Federman S, Milochau A, Castano S, Sbi W, Manigand C, Laguerre M, Desbat B, Oda R, Lang J.

Biochim Biophys Acta. 2009 Sep;1788(9):1722-30. doi: 10.1016/j.bbamem.2009.05.014. Epub 2009 May 29.

36.

Ribozyme-mediated targeting of IkappaBgamma inhibits melanoma invasion and metastasis.

Torabian SZ, de Semir D, Nosrati M, Bagheri S, Dar AA, Fong S, Liu Y, Federman S, Simko J, Haqq C, Debs RJ, Kashani-Sabet M.

Am J Pathol. 2009 Mar;174(3):1009-16. doi: 10.2353/ajpath.2009.080207. Epub 2009 Jan 29.

37.

Genes and pathways downstream of telomerase in melanoma metastasis.

Bagheri S, Nosrati M, Li S, Fong S, Torabian S, Rangel J, Moore DH, Federman S, Laposa RR, Baehner FL, Sagebiel RW, Cleaver JE, Haqq C, Debs RJ, Blackburn EH, Kashani-Sabet M.

Proc Natl Acad Sci U S A. 2006 Jul 25;103(30):11306-11. Epub 2006 Jul 17.

39.

The gene expression signatures of melanoma progression.

Haqq C, Nosrati M, Sudilovsky D, Crothers J, Khodabakhsh D, Pulliam BL, Federman S, Miller JR 3rd, Allen RE, Singer MI, Leong SP, Ljung BM, Sagebiel RW, Kashani-Sabet M.

Proc Natl Acad Sci U S A. 2005 Apr 26;102(17):6092-7. Epub 2005 Apr 15.

40.

COX-2-mediated PGD2 synthesis regulates phosphatidylcholine biosynthesis in rat renal papillary tissue.

Fernández-Tome M, Kraemer L, Federman SC, Favale N, Speziale E, Sterin-Speziale N.

Biochem Pharmacol. 2004 Jan 15;67(2):245-54.

PMID:
14698037
41.

Following matrix metalloproteinases activity near the cell boundary by infrared micro-spectroscopy.

Federman S, Miller LM, Sagi I.

Matrix Biol. 2002 Nov;21(7):567-77.

PMID:
12475641
42.

Newly synthesized lithium in the interstellar medium

Knauth DC, Federman SR, Lambert DL, Crane P.

Nature. 2000 Jun 8;405(6787):656-8.

PMID:
10864316
43.

Plasma macromolecular protein complex: interaction with fibrin and fibrinolysis.

Lipinski B, Federman SM, Krolewski AS.

Thromb Res. 1995 Jun 1;78(5):461-5. No abstract available.

PMID:
7660362
44.

Comments on plasma fibrinogen levels measured by functional methods.

Lipinski B, Federman SM, Krolewski AS.

Thromb Haemost. 1994 Dec;72(6):985. No abstract available.

PMID:
7740472
45.

Structural analysis of integrin recognition and the inhibition of integrin-mediated cell functions by novel nonpeptidic surrogates of the Arg-Gly-Asp sequence.

Greenspoon N, Hershkoviz R, Alon R, Varon D, Shenkman B, Marx G, Federman S, Kapustina G, Lider O.

Biochemistry. 1993 Feb 2;32(4):1001-8.

PMID:
8093840
46.

Formaldehyde reactions in dark clouds.

Sen AD, Anicich VG, Federman SR.

Astrophys J. 1992 May 20;39(1 Pt 1):141-3.

PMID:
11538382
47.

Grip and pinch strength: norms for 6- to 19-year-olds.

Mathiowetz V, Wiemer DM, Federman SM.

Am J Occup Ther. 1986 Oct;40(10):705-11.

PMID:
3777107
48.

What dentistry owes the midnight rider, Paul Revere.

Federman S.

CAL. 1970 Sep;33(3):2-5. No abstract available.

PMID:
5275135

Supplemental Content

Loading ...
Support Center