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Vibrio cholerae strains with inactivated cqsS gene overproduce autoinducer-2 which enhances resuscitation of dormant environmental V. cholerae.

Naser IB, Hoque MM, Faruque SN, Kamruzzaman M, Yamasaki S, Faruque SM.

PLoS One. 2019 Oct 1;14(10):e0223226. doi: 10.1371/journal.pone.0223226. eCollection 2019.


Toxigenic properties and stx phage characterization of Escherichia coli O157 isolated from animal sources in a developing country setting.

Rahman M, Nabi A, Asadulghani M, Faruque SM, Islam MA.

BMC Microbiol. 2018 Aug 31;18(1):98. doi: 10.1186/s12866-018-1235-3.


Analysis of the CRISPR-Cas system in bacteriophages active on epidemic strains of Vibrio cholerae in Bangladesh.

Naser IB, Hoque MM, Nahid MA, Tareq TM, Rocky MK, Faruque SM.

Sci Rep. 2017 Nov 1;7(1):14880. doi: 10.1038/s41598-017-14839-2.


Environmental bacteriophages active on biofilms and planktonic forms of toxigenic Vibrio cholerae: Potential relevance in cholera epidemiology.

Naser IB, Hoque MM, Abdullah A, Bari SMN, Ghosh AN, Faruque SM.

PLoS One. 2017 Jul 10;12(7):e0180838. doi: 10.1371/journal.pone.0180838. eCollection 2017.


Environmental Spread of New Delhi Metallo-β-Lactamase-1-Producing Multidrug-Resistant Bacteria in Dhaka, Bangladesh.

Islam MA, Islam M, Hasan R, Hossain MI, Nabi A, Rahman M, Goessens WHF, Endtz HP, Boehm AB, Faruque SM.

Appl Environ Microbiol. 2017 Jul 17;83(15). pii: e00793-17. doi: 10.1128/AEM.00793-17. Print 2017 Aug 1.


Quorum Regulated Resistance of Vibrio cholerae against Environmental Bacteriophages.

Hoque MM, Naser IB, Bari SM, Zhu J, Mekalanos JJ, Faruque SM.

Sci Rep. 2016 Nov 28;6:37956. doi: 10.1038/srep37956.


Safe distances between groundwater-based water wells and pit latrines at different hydrogeological conditions in the Ganges Atrai floodplains of Bangladesh.

Islam MS, Mahmud ZH, Islam MS, Saha GC, Zahid A, Ali AZ, Hassan MQ, Islam K, Jahan H, Hossain Y, Hasan MM, Cairncross S, Carter R, Luby SP, Cravioto A, Endtz HP, Faruque SM, Clemens JD.

J Health Popul Nutr. 2016 Aug 19;35(1):26. doi: 10.1186/s41043-016-0063-z.


Faecal contamination of commuters' hands in main vehicle stations in Dhaka city, Bangladesh.

Islam MS, Mahmud ZH, Islam MS, Zaman RU, Islam MR, Gope PS, Islam K, Jahan H, Opel A, Shaha GC, Faruque SM, Clemens JD.

Trans R Soc Trop Med Hyg. 2016 Jun;110(6):367-72. doi: 10.1093/trstmh/trw037.


Suppression of Virulence of Toxigenic Vibrio cholerae by Anethole through the Cyclic AMP (cAMP)-cAMP Receptor Protein Signaling System.

Zahid MS, Awasthi SP, Asakura M, Chatterjee S, Hinenoya A, Faruque SM, Yamasaki S.

PLoS One. 2015 Sep 11;10(9):e0137529. doi: 10.1371/journal.pone.0137529. eCollection 2015.


Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri.

Connor TR, Barker CR, Baker KS, Weill FX, Talukder KA, Smith AM, Baker S, Gouali M, Pham Thanh D, Jahan Azmi I, Dias da Silveira W, Semmler T, Wieler LH, Jenkins C, Cravioto A, Faruque SM, Parkhill J, Wook Kim D, Keddy KH, Thomson NR.

Elife. 2015 Aug 4;4:e07335. doi: 10.7554/eLife.07335.


Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study.

Baker KS, Dallman TJ, Ashton PM, Day M, Hughes G, Crook PD, Gilbart VL, Zittermann S, Allen VG, Howden BP, Tomita T, Valcanis M, Harris SR, Connor TR, Sintchenko V, Howard P, Brown JD, Petty NK, Gouali M, Thanh DP, Keddy KH, Smith AM, Talukder KA, Faruque SM, Parkhill J, Baker S, Weill FX, Jenkins C, Thomson NR.

Lancet Infect Dis. 2015 Aug;15(8):913-21. doi: 10.1016/S1473-3099(15)00002-X. Epub 2015 Apr 27.


Phenotypic and genotypic characteristics of Vibrio cholerae O1 isolated from the Sierra Leone cholera outbreak in 2012.

Mahmud ZH, Islam S, Zaman RU, Akter M, Talukder KA, Bardhan PK, Khan AI, Rhodes FC, Kamara A, Wurie IM, Alemu W, Jambai A, Faruque SM, Clemens JD, Islam MS.

Trans R Soc Trop Med Hyg. 2014 Nov;108(11):715-20. doi: 10.1093/trstmh/tru137. Epub 2014 Sep 18.


Fluoroquinolone resistance mechanisms of Shigella flexneri isolated in Bangladesh.

Azmi IJ, Khajanchi BK, Akter F, Hasan TN, Shahnaij M, Akter M, Banik A, Sultana H, Hossain MA, Ahmed MK, Faruque SM, Talukder KA.

PLoS One. 2014 Jul 16;9(7):e102533. doi: 10.1371/journal.pone.0102533. eCollection 2014.


RS1 satellite phage promotes diversity of toxigenic Vibrio cholerae by driving CTX prophage loss and elimination of lysogenic immunity.

Kamruzzaman M, Robins WP, Bari SM, Nahar S, Mekalanos JJ, Faruque SM.

Infect Immun. 2014 Sep;82(9):3636-43. doi: 10.1128/IAI.01699-14. Epub 2014 Jun 16.


Molecular characterization of cytolethal distending toxin gene-positive Escherichia coli from healthy cattle and swine in Nara, Japan.

Hinenoya A, Shima K, Asakura M, Nishimura K, Tsukamoto T, Ooka T, Hayashi T, Ramamurthy T, Faruque SM, Yamasaki S.

BMC Microbiol. 2014 Apr 18;14:97. doi: 10.1186/1471-2180-14-97.


Changing trends in the prevalence of Shigella species: emergence of multi-drug resistant Shigella sonnei biotype g in Bangladesh.

Ud-Din AI, Wahid SU, Latif HA, Shahnaij M, Akter M, Azmi IJ, Hasan TN, Ahmed D, Hossain MA, Faruque AS, Faruque SM, Talukder KA.

PLoS One. 2013 Dec 18;8(12):e82601. doi: 10.1371/journal.pone.0082601. eCollection 2013.


Genetic and phenotypic analysis of Vibrio cholerae non-O1, non-O139 isolated from German and Austrian patients.

Schirmeister F, Dieckmann R, Bechlars S, Bier N, Faruque SM, Strauch E.

Eur J Clin Microbiol Infect Dis. 2014 May;33(5):767-78. doi: 10.1007/s10096-013-2011-9. Epub 2013 Nov 10.


Role of phages in the epidemiology of cholera.

Faruque SM.

Curr Top Microbiol Immunol. 2014;379:165-80. doi: 10.1007/82_2013_358. Review.


Quorum-sensing autoinducers resuscitate dormant Vibrio cholerae in environmental water samples.

Bari SM, Roky MK, Mohiuddin M, Kamruzzaman M, Mekalanos JJ, Faruque SM.

Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9926-31. doi: 10.1073/pnas.1307697110. Epub 2013 May 28.


In vitro and in vivo bactericidal activity of Vitex negundo leaf extract against diverse multidrug resistant enteric bacterial pathogens.

Kamruzzaman M, Bari SM, Faruque SM.

Asian Pac J Trop Med. 2013 May 13;6(5):352-9. doi: 10.1016/S1995-7645(13)60038-3.


Genetic diversity and antibiotic resistance in Escherichia coli from environmental surface water in Dhaka City, Bangladesh.

Kamruzzaman M, Shoma S, Bari SM, Ginn AN, Wiklendt AM, Partridge SR, Faruque SM, Iredell JR.

Diagn Microbiol Infect Dis. 2013 Jun;76(2):222-6. doi: 10.1016/j.diagmicrobio.2013.02.016. Epub 2013 Mar 28.


Coupling mutagenesis and parallel deep sequencing to probe essential residues in a genome or gene.

Robins WP, Faruque SM, Mekalanos JJ.

Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):E848-57. doi: 10.1073/pnas.1222538110. Epub 2013 Feb 11.


Phage-bacterial interactions in the evolution of toxigenic Vibrio cholerae.

Faruque SM, Mekalanos JJ.

Virulence. 2012 Nov 15;3(7):556-65. doi: 10.4161/viru.22351. Epub 2012 Oct 17. Review.


Phase variable O antigen biosynthetic genes control expression of the major protective antigen and bacteriophage receptor in Vibrio cholerae O1.

Seed KD, Faruque SM, Mekalanos JJ, Calderwood SB, Qadri F, Camilli A.

PLoS Pathog. 2012 Sep;8(9):e1002917. doi: 10.1371/journal.ppat.1002917. Epub 2012 Sep 13.


Molecular characterizations of cytolethal distending toxin produced by Providencia alcalifaciens strains isolated from patients with diarrhea.

Shima A, Hinenoya A, Asakura M, Sugimoto N, Tsukamoto T, Ito H, Nagita A, Faruque SM, Yamasaki S.

Infect Immun. 2012 Apr;80(4):1323-32. doi: 10.1128/IAI.05831-11. Epub 2012 Jan 17.


Phenotypic, genotypic, and antibiotic sensitivity patterns of strains isolated from the cholera epidemic in Zimbabwe.

Islam MS, Mahmud ZH, Ansaruzzaman M, Faruque SM, Talukder KA, Qadri F, Alam M, Islam S, Bardhan PK, Mazumder RN, Khan AI, Ahmed S, Iqbal A, Chitsatso O, Mudzori J, Patel S, Midzi SM, Charimari L, Endtz HP, Cravioto A.

J Clin Microbiol. 2011 Jun;49(6):2325-7. doi: 10.1128/JCM.00432-11. Epub 2011 Apr 6.


An experimental study of phage mediated bactericidal selection & emergence of the El Tor Vibrio cholerae.

Zahid MS, Waise Z, Kamruzzaman M, Ghosh AN, Nair GB, Khairul Bashar SA, Mekalanos JJ, Faruque SM.

Indian J Med Res. 2011 Feb;133:218-24.


Functional analysis of VopF activity required for colonization in Vibrio cholerae.

Tam VC, Suzuki M, Coughlin M, Saslowsky D, Biswas K, Lencer WI, Faruque SM, Mekalanos JJ.

mBio. 2010 Dec 7;1(5). pii: e00289-10. doi: 10.1128/mBio.00289-10.


Satellite phage TLCφ enables toxigenic conversion by CTX phage through dif site alteration.

Hassan F, Kamruzzaman M, Mekalanos JJ, Faruque SM.

Nature. 2010 Oct 21;467(7318):982-5. doi: 10.1038/nature09469. Epub 2010 Oct 13.


The cyclic AMP (cAMP)-cAMP receptor protein signaling system mediates resistance of Vibrio cholerae O1 strains to multiple environmental bacteriophages.

Zahid MS, Waise TM, Kamruzzaman M, Ghosh AN, Nair GB, Mekalanos JJ, Faruque SM.

Appl Environ Microbiol. 2010 Jul;76(13):4233-40. doi: 10.1128/AEM.00008-10. Epub 2010 May 14.


Quorum-regulated biofilms enhance the development of conditionally viable, environmental Vibrio cholerae.

Kamruzzaman M, Udden SM, Cameron DE, Calderwood SB, Nair GB, Mekalanos JJ, Faruque SM.

Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1588-93. doi: 10.1073/pnas.0913404107. Epub 2010 Jan 4.


Development of simple and rapid PCR-fingerprinting methods for Vibrio cholerae on the basis of genetic diversity of the superintegron.

Chowdhury N, Asakura M, Neogi SB, Hinenoya A, Haldar S, Ramamurthy T, Sarkar BL, Faruque SM, Yamasaki S.

J Appl Microbiol. 2010 Jul;109(1):304-12. doi: 10.1111/j.1365-2672.2009.04658.x. Epub 2010 Jan 11.


Prevalence and characteristics of cytolethal distending toxin-producing Escherichia coli from children with diarrhea in Japan.

Hinenoya A, Naigita A, Ninomiya K, Asakura M, Shima K, Seto K, Tsukamoto T, Ramamurthy T, Faruque SM, Yamasaki S.

Microbiol Immunol. 2009 Apr;53(4):206-15.


El Tor cholera with severe disease: a new threat to Asia and beyond.

Siddique AK, Nair GB, Alam M, Sack DA, Huq A, Nizam A, Longini IM Jr, Qadri F, Faruque SM, Colwell RR, Ahmed S, Iqbal A, Bhuiyan NA, Sack RB.

Epidemiol Infect. 2010 Mar;138(3):347-52. doi: 10.1017/S0950268809990550. Epub 2009 Aug 14.


Effect of phage on the infectivity of Vibrio cholerae and emergence of genetic variants.

Zahid MS, Udden SM, Faruque AS, Calderwood SB, Mekalanos JJ, Faruque SM.

Infect Immun. 2008 Nov;76(11):5266-73. doi: 10.1128/IAI.00578-08. Epub 2008 Sep 15.


Acquisition of classical CTX prophage from Vibrio cholerae O141 by El Tor strains aided by lytic phages and chitin-induced competence.

Udden SM, Zahid MS, Biswas K, Ahmad QS, Cravioto A, Nair GB, Mekalanos JJ, Faruque SM.

Proc Natl Acad Sci U S A. 2008 Aug 19;105(33):11951-6. doi: 10.1073/pnas.0805560105. Epub 2008 Aug 8.


Distribution of genes for virulence and ecological fitness among diverse Vibrio cholerae population in a cholera endemic area: tracking the evolution of pathogenic strains.

Rahman MH, Biswas K, Hossain MA, Sack RB, Mekalanos JJ, Faruque SM.

DNA Cell Biol. 2008 Jul;27(7):347-55. doi: 10.1089/dna.2008.0737.


Seasonal cholera from multiple small outbreaks, rural Bangladesh.

Stine OC, Alam M, Tang L, Nair GB, Siddique AK, Faruque SM, Huq A, Colwell R, Sack RB, Morris JG Jr.

Emerg Infect Dis. 2008 May;14(5):831-3. doi: 10.3201/eid1405.071116.


Molecular epidemiological studies of Vibrio cholerae in Bengal region.

Shinoda S, Nakagawa T, Hirakawa N, Miyoshi S, Arakawa E, Ramamurthy T, Dutta B, Faruque SM, Nair GB.

Biocontrol Sci. 2008 Mar;13(1):1-8.


An inducible lambdoid prophage encoding cytolethal distending toxin (Cdt-I) and a type III effector protein in enteropathogenic Escherichia coli.

Asakura M, Hinenoya A, Alam MS, Shima K, Zahid SH, Shi L, Sugimoto N, Ghosh AN, Ramamurthy T, Faruque SM, Nair GB, Yamasaki S.

Proc Natl Acad Sci U S A. 2007 Sep 4;104(36):14483-8. Epub 2007 Aug 28.


Genomic analysis of the Mozambique strain of Vibrio cholerae O1 reveals the origin of El Tor strains carrying classical CTX prophage.

Faruque SM, Tam VC, Chowdhury N, Diraphat P, Dziejman M, Heidelberg JF, Clemens JD, Mekalanos JJ, Nair GB.

Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):5151-6. Epub 2007 Mar 12.


Peru-15, a live attenuated oral cholera vaccine, is safe and immunogenic in Bangladeshi toddlers and infants.

Qadri F, Chowdhury MI, Faruque SM, Salam MA, Ahmed T, Begum YA, Saha A, Al Tarique A, Seidlein LV, Park E, Killeen KP, Mekalanos JJ, Clemens JD, Sack DA; PXV Study Group.

Vaccine. 2007 Jan 4;25(2):231-8. Epub 2006 Sep 5.


Cholera due to altered El Tor strains of Vibrio cholerae O1 in Bangladesh.

Nair GB, Qadri F, Holmgren J, Svennerholm AM, Safa A, Bhuiyan NA, Ahmad QS, Faruque SM, Faruque AS, Takeda Y, Sack DA.

J Clin Microbiol. 2006 Nov;44(11):4211-3. Epub 2006 Sep 6.


Aetiology of diarrhoea in a birth cohort of children aged 0-2 year(s) in rural Mirzapur, Bangladesh.

Hasan KZ, Pathela P, Alam K, Podder G, Faruque SM, Roy E, Haque AK, Haque R, Albert MJ, Siddique AK, Sack RB.

J Health Popul Nutr. 2006 Mar;24(1):25-35.


Phenotypic and molecular characteristics of Escherichia coli isolated from aquatic environment of Bangladesh.

Alam M, Nur-A-Hasan, Ahsan S, Pazhani GP, Tamura K, Ramamurthy T, Gomes DJ, Rahman SR, Islam A, Akhtar F, Shinoda S, Watanabe H, Faruque SM, Nair GB.

Microbiol Immunol. 2006;50(5):359-70.


Transmissibility of cholera: in vivo-formed biofilms and their relationship to infectivity and persistence in the environment.

Faruque SM, Biswas K, Udden SM, Ahmad QS, Sack DA, Nair GB, Mekalanos JJ.

Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6350-5. Epub 2006 Apr 6.


Cholera stool bacteria repress chemotaxis to increase infectivity.

Butler SM, Nelson EJ, Chowdhury N, Faruque SM, Calderwood SB, Camilli A.

Mol Microbiol. 2006 Apr;60(2):417-26.


Modeling the role of bacteriophage in the control of cholera outbreaks.

Jensen MA, Faruque SM, Mekalanos JJ, Levin BR.

Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4652-7. Epub 2006 Mar 14.


An improved technique for isolation of environmental Vibrio cholerae with epidemic potential: monitoring the emergence of a multiple-antibiotic-resistant epidemic strain in Bangladesh.

Faruque SM, Islam MJ, Ahmad QS, Biswas K, Faruque AS, Nair GB, Sack RB, Sack DA, Mekalanos JJ.

J Infect Dis. 2006 Apr 1;193(7):1029-36. Epub 2006 Feb 21.


Contribution of nuclear and extranuclear polyQ to neurological phenotypes in mouse models of Huntington's disease.

Benn CL, Landles C, Li H, Strand AD, Woodman B, Sathasivam K, Li SH, Ghazi-Noori S, Hockly E, Faruque SM, Cha JH, Sharpe PT, Olson JM, Li XJ, Bates GP.

Hum Mol Genet. 2005 Oct 15;14(20):3065-78. Epub 2005 Sep 23.


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