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Items: 46

1.

Genetic and biological characterisation of Zika virus isolates from different Brazilian regions.

Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, Cataneo AHD, Kuczera D, Wowk PF, Bordignon J, Duarte Dos Santos CN.

Mem Inst Oswaldo Cruz. 2019;114:e190150. doi: 10.1590/0074-02760190150. Epub 2019 Aug 19.

2.

Metataxonomic and metagenomic analysis of mangrove microbiomes reveals community patterns driven by salinity and pH gradients in Paranaguá Bay, Brazil.

Ceccon DM, Faoro H, Lana PDC, Souza EM, Pedrosa FO.

Sci Total Environ. 2019 Dec 1;694:133609. doi: 10.1016/j.scitotenv.2019.133609. Epub 2019 Jul 27.

PMID:
31400683
3.

Genome comparison between clinical and environmental strains of Herbaspirillum seropedicae reveals a potential new emerging bacterium adapted to human hosts.

Faoro H, Oliveira WK, Weiss VA, Tadra-Sfeir MZ, Cardoso RL, Balsanelli E, Brusamarello-Santos LCC, Camilios-Neto D, Cruz LM, Raittz RT, Marques ACQ, LiPuma J, Fadel-Picheth CMT, Souza EM, Pedrosa FO.

BMC Genomics. 2019 Aug 2;20(1):630. doi: 10.1186/s12864-019-5982-9.

4.

Comparison of the RNA Content of Extracellular Vesicles Derived from Paracoccidioides brasiliensis and Paracoccidioides lutzii.

Peres da Silva R, Longo LGV, Cunha JPCD, Sobreira TJP, Rodrigues ML, Faoro H, Goldenberg S, Alves LR, Puccia R.

Cells. 2019 Jul 23;8(7). pii: E765. doi: 10.3390/cells8070765.

5.

Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae.

Brusamarello-Santos LCC, Alberton D, Valdameri G, Camilios-Neto D, Covre R, Lopes KP, Zibetti Tadra-Sfeir M, Faoro H, Adele Monteiro R, Barbosa-Silva A, John Broughton W, Oliveira Pedrosa F, Wassem R, Souza EM.

Sci Rep. 2019 Jul 22;9(1):10573. doi: 10.1038/s41598-019-45866-w.

6.

Identification of a novel alphavirus related to the encephalitis complexes circulating in southern Brazil.

Tschá MK, Suzukawa AA, Gräf T, Piancini LDS, da Silva AM, Faoro H, Riediger IN, Medeiros LC, Wowk PF, Zanluca C, Duarte Dos Santos CN.

Emerg Microbes Infect. 2019;8(1):920-933. doi: 10.1080/22221751.2019.1632152.

7.

Genome Analysis of Entomopathogenic Bacillus sp. ABP14 Isolated from a Lignocellulosic Compost.

Andreazza AP, Cardoso RLA, Cocco J, Guizelini D, Faoro H, Tadra-Sfeir MZ, Balsanelli E, Cruz LM, Fadel-Picheth CMT, Donatti L, Souza EM, Foerster LA, Pedrosa FO, Chubatsu LS.

Genome Biol Evol. 2019 Jun 1;11(6):1658-1662. doi: 10.1093/gbe/evz114.

8.

Identification of insect-specific flaviviruses in areas of Brazil and Paraguay experiencing endemic arbovirus transmission and the description of a novel flavivirus infecting Sabethes belisarioi.

Gravina HD, Suzukawa AA, Zanluca C, Cardozo Segovia FM, Tschá MK, Martins da Silva A, Faoro H, da Silva Ribeiro R, Mendoza Torres LP, Rojas A, Ferrerira L, Costa Ribeiro MCVD, Delfraro A, Duarte Dos Santos CN.

Virology. 2019 Jan 15;527:98-106. doi: 10.1016/j.virol.2018.11.008. Epub 2018 Nov 24.

9.

Metagenomic evaluation of the effects of storage conditions on the bacterial microbiota of oysters Crassostrea gasar (Adanson, 1757).

Ostrensky A, Horodesky A, Faoro H, Balsanelli E, Sfeir MZT, Cozer N, Pie MR, Dal Pont G, Castilho-Westphal GG.

J Appl Microbiol. 2018 Nov;125(5):1435-1443. doi: 10.1111/jam.14045. Epub 2018 Aug 30.

PMID:
29992707
10.

Emended description of the genus Phytobacter, its type species Phytobacter diazotrophicus (Zhang 2008) and description of Phytobacter ursingii sp. nov.

Pillonetto M, Arend LN, Faoro H, D'Espindula HRS, Blom J, Smits THM, Mira MT, Rezzonico F.

Int J Syst Evol Microbiol. 2018 Jan;68(1):176-184. doi: 10.1099/ijsem.0.002477. Epub 2017 Nov 10.

PMID:
29125457
11.

Comparative Genomics of Sibling Species of Fonsecaea Associated with Human Chromoblastomycosis.

Vicente VA, Weiss VA, Bombassaro A, Moreno LF, Costa FF, Raittz RT, Leão AC, Gomes RR, Bocca AL, Fornari G, de Castro RJA, Sun J, Faoro H, Tadra-Sfeir MZ, Baura V, Balsanelli E, Almeida SR, Dos Santos SS, Teixeira MM, Soares Felipe MS, do Nascimento MMF, Pedrosa FO, Steffens MB, Attili-Angelis D, Najafzadeh MJ, Queiroz-Telles F, Souza EM, De Hoog S.

Front Microbiol. 2017 Oct 9;8:1924. doi: 10.3389/fmicb.2017.01924. eCollection 2017.

12.

RNA-binding proteins and their role in the regulation of gene expression in Trypanosoma cruzi and Saccharomyces cerevisiae.

Oliveira C, Faoro H, Alves LR, Goldenberg S.

Genet Mol Biol. 2017 Jan-Mar;40(1):22-30. doi: 10.1590/1678-4685-GMB-2016-0258.

13.

Development and validation of the first SSR markers for Mimosa scabrella Benth.

Saiki FA, Bernardi AP, Reis MS, Faoro H, Souza EM, Pedrosa FO, Mantovani A, Guidolin AF.

Genet Mol Res. 2017 Feb 16;16(1). doi: 10.4238/gmr16019571.

PMID:
28218791
14.

Genome Sequence of Type Strain Fonsecaea multimorphosa CBS 980.96T, a Causal Agent of Feline Cerebral Phaeohyphomycosis.

Leao AC, Weiss VA, Vicente VA, Costa F, Bombassaro A, Raittz RT, Steffens MB, Pedrosa FO, Gomes RR, Baura V, Faoro H, Sfeir MZ, Balsanelli E, Moreno LF, Najafzadeh MJ, de Hoog S, Souza EM.

Genome Announc. 2017 Feb 16;5(7). pii: e01666-16. doi: 10.1128/genomeA.01666-16.

15.

A broad pH range and processive chitinase from a metagenome library.

Thimoteo SS, Glogauer A, Faoro H, de Souza EM, Huergo LF, Moerschbacher BM, Pedrosa FO.

Braz J Med Biol Res. 2017 Jan 5;50(1):e5658. doi: 10.1590/1414-431X20165658.

16.

The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T is genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72.

Faoro H, Rene Menegazzo R, Battistoni F, Gyaneshwar P, do Amaral FP, Taulé C, Rausch S, Gonçalves Galvão P, de Los Santos C, Mitra S, Heijo G, Sheu SY, Chen WM, Mareque C, Zibetti Tadra-Sfeir M, Ivo Baldani J, Maluk M, Paula Guimarães A, Stacey G, de Souza EM, Pedrosa FO, Magalhães Cruz L, James EK.

Environ Microbiol Rep. 2017 Jun;9(3):223-238. doi: 10.1111/1758-2229.12502. Epub 2017 Jan 27.

PMID:
27893193
17.

RNA-seq transcriptional profiling of Herbaspirillum seropedicae colonizing wheat (Triticum aestivum) roots.

Pankievicz VC, Camilios-Neto D, Bonato P, Balsanelli E, Tadra-Sfeir MZ, Faoro H, Chubatsu LS, Donatti L, Wajnberg G, Passetti F, Monteiro RA, Pedrosa FO, Souza EM.

Plant Mol Biol. 2016 Apr;90(6):589-603. doi: 10.1007/s11103-016-0430-6. Epub 2016 Jan 22.

PMID:
26801330
18.

Phylogenetic inference and SSR characterization of tropical woody bamboos tribe Bambuseae (Poaceae: Bambusoideae) based on complete plastid genome sequences.

Vieira Ldo N, Dos Anjos KG, Faoro H, Fraga HP, Greco TM, Pedrosa Fde O, de Souza EM, Rogalski M, de Souza RF, Guerra MP.

Curr Genet. 2016 May;62(2):443-53. doi: 10.1007/s00294-015-0549-z. Epub 2015 Dec 7.

PMID:
26643654
19.

Complete Genome Sequence of Herbaspirillum hiltneri N3 (DSM 17495), Isolated from Surface-Sterilized Wheat Roots.

Guizelini D, Saizaki PM, Coimbra NA, Weiss VA, Faoro H, Sfeir MZ, Baura VA, Monteiro RA, Chubatsu LS, Souza EM, Cruz LM, Pedrosa FO, Raittz RT, Marchaukoski JN, Steffens MB.

Genome Announc. 2015 Oct 29;3(5). pii: e01288-15. doi: 10.1128/genomeA.01288-15.

20.

Genome wide transcriptional profiling of Herbaspirillum seropedicae SmR1 grown in the presence of naringenin.

Tadra-Sfeir MZ, Faoro H, Camilios-Neto D, Brusamarello-Santos L, Balsanelli E, Weiss V, Baura VA, Wassem R, Cruz LM, De Oliveira Pedrosa F, Souza EM, Monteiro RA.

Front Microbiol. 2015 May 21;6:491. doi: 10.3389/fmicb.2015.00491. eCollection 2015.

21.

Draft Genome Sequence of Aeromonas caviae 8LM, Isolated from Stool Culture of a Child with Diarrhea.

Moriel B, Cruz LM, Dallagassa CB, Faoro H, de Souza EM, Pedrosa FO, Rego FG, Picheth G, Fadel-Picheth CM.

Genome Announc. 2015 May 21;3(3). pii: e00524-15. doi: 10.1128/genomeA.00524-15.

22.

Molecular adaptations of Herbaspirillum seropedicae during colonization of the maize rhizosphere.

Balsanelli E, Tadra-Sfeir MZ, Faoro H, Pankievicz VC, de Baura VA, Pedrosa FO, de Souza EM, Dixon R, Monteiro RA.

Environ Microbiol. 2016 Sep;18(8):2343-56. doi: 10.1111/1462-2920.12887. Epub 2015 Jun 11.

PMID:
25923055
23.

Genome of Rhizobium sp. UR51a, Isolated from Rice Cropped in Southern Brazilian Fields.

de Souza R, Sant'Anna FH, Ambrosini A, Tadra-Sfeir M, Faoro H, Pedrosa FO, Souza EM, Passaglia LM.

Genome Announc. 2015 Apr 2;3(2). pii: e00249-15. doi: 10.1128/genomeA.00249-15.

24.

Genome of Pseudomonas sp. FeS53a, a Putative Plant Growth-Promoting Bacterium Associated with Rice Grown in Iron-Stressed Soils.

de Souza R, Sant'Anna FH, Ambrosini A, Tadra-Sfeir M, Faoro H, Pedrosa FO, Souza EM, Passaglia LM.

Genome Announc. 2015 Apr 2;3(2). pii: e00248-15. doi: 10.1128/genomeA.00248-15.

25.

Whole-Genome Shotgun Sequence of the Keratinolytic Bacterium Lysobacter sp. A03, Isolated from the Antarctic Environment.

Pereira JQ, Ambrosini A, Sant'Anna FH, Tadra-Sfeir M, Faoro H, Pedrosa FO, Souza EM, Brandelli A, Passaglia LM.

Genome Announc. 2015 Apr 2;3(2). pii: e00246-15. doi: 10.1128/genomeA.00246-15.

26.

Genome Sequence of Bacillus mycoides B38V, a Growth-Promoting Bacterium of Sunflower.

Ambrosini A, Sant'Anna FH, de Souza R, Tadra-Sfeir M, Faoro H, Alvarenga SM, Pedrosa FO, Souza EM, Passaglia LM.

Genome Announc. 2015 Apr 2;3(2). pii: e00245-15. doi: 10.1128/genomeA.00245-15.

27.

FGAP: an automated gap closing tool.

Piro VC, Faoro H, Weiss VA, Steffens MB, Pedrosa FO, Souza EM, Raittz RT.

BMC Res Notes. 2014 Jun 18;7:371. doi: 10.1186/1756-0500-7-371.

28.

Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes.

Camilios-Neto D, Bonato P, Wassem R, Tadra-Sfeir MZ, Brusamarello-Santos LC, Valdameri G, Donatti L, Faoro H, Weiss VA, Chubatsu LS, Pedrosa FO, Souza EM.

BMC Genomics. 2014 May 16;15:378. doi: 10.1186/1471-2164-15-378.

29.

The complete chloroplast genome sequence of Podocarpus lambertii: genome structure, evolutionary aspects, gene content and SSR detection.

Vieira Ldo N, Faoro H, Rogalski M, Fraga HP, Cardoso RL, de Souza EM, de Oliveira Pedrosa F, Nodari RO, Guerra MP.

PLoS One. 2014 Mar 4;9(3):e90618. doi: 10.1371/journal.pone.0090618. eCollection 2014.

30.

An improved protocol for intact chloroplasts and cpDNA isolation in conifers.

Vieira Ldo N, Faoro H, Fraga HP, Rogalski M, de Souza EM, de Oliveira Pedrosa F, Nodari RO, Guerra MP.

PLoS One. 2014 Jan 2;9(1):e84792. doi: 10.1371/journal.pone.0084792. eCollection 2014.

31.

Culture-independent analysis of endophytic bacterial communities associated with Brazilian sugarcane.

Magnani GS, Cruz LM, Weber H, Bespalhok JC, Daros E, Baura V, Yates MG, Monteiro RA, Faoro H, Pedrosa FO, Souza EM.

Genet Mol Res. 2013 Oct 15;12(4):4549-58. doi: 10.4238/2013.October.15.3.

32.

The Herbaspirillum seropedicae SmR1 Fnr orthologs controls the cytochrome composition of the electron transport chain.

Batista MB, Sfeir MZ, Faoro H, Wassem R, Steffens MB, Pedrosa FO, Souza EM, Dixon R, Monteiro RA.

Sci Rep. 2013;3:2544. doi: 10.1038/srep02544.

33.

Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water.

de Souza V, Piro VC, Faoro H, Tadra-Sfeir MZ, Chicora VK, Guizelini D, Weiss V, Vialle RA, Monteiro RA, Steffens MB, Marchaukoski JN, Pedrosa FO, Cruz LM, Chubatsu LS, Raittz RT.

Genome Announc. 2013 Jan;1(1). pii: e00252-12. doi: 10.1128/genomeA.00252-12. Epub 2013 Feb 21.

34.

Draft genome sequence of Herbaspirillum lusitanum P6-12, an endophyte isolated from root nodules of Phaseolus vulgaris.

Weiss VA, Faoro H, Tadra-Sfeir MZ, Raittz RT, de Souza EM, Monteiro RA, Cardoso RL, Wassem R, Chubatsu LS, Huergo LF, Müller-Santos M, Steffens MB, Rigo LU, Pedrosa Fde O, Cruz LM.

J Bacteriol. 2012 Aug;194(15):4136-7. doi: 10.1128/JB.00657-12.

35.

The type III secretion system is necessary for the development of a pathogenic and endophytic interaction between Herbaspirillum rubrisubalbicans and Poaceae.

Schmidt MA, Balsanelli E, Faoro H, Cruz LM, Wassem R, de Baura VA, Weiss V, Yates MG, Madeira HM, Pereira-Ferrari L, Fungaro MH, de Paula FM, Pereira LF, Vieira LG, Olivares FL, Pedrosa FO, de Souza EM, Monteiro RA.

BMC Microbiol. 2012 Jun 6;12:98. doi: 10.1186/1471-2180-12-98.

36.

Characterization of a new Acidobacteria-derived moderately thermostable lipase from a Brazilian Atlantic Forest soil metagenome.

Faoro H, Glogauer A, Couto GH, de Souza EM, Rigo LU, Cruz LM, Monteiro RA, Pedrosa Fde O.

FEMS Microbiol Ecol. 2012 Aug;81(2):386-94. doi: 10.1111/j.1574-6941.2012.01361.x. Epub 2012 Apr 19.

37.

Genomic comparison of the endophyte Herbaspirillum seropedicae SmR1 and the phytopathogen Herbaspirillum rubrisubalbicans M1 by suppressive subtractive hybridization and partial genome sequencing.

Monteiro RA, Balsanelli E, Tuleski T, Faoro H, Cruz LM, Wassem R, de Baura VA, Tadra-Sfeir MZ, Weiss V, DaRocha WD, Muller-Santos M, Chubatsu LS, Huergo LF, Pedrosa FO, de Souza EM.

FEMS Microbiol Ecol. 2012 May;80(2):441-51. doi: 10.1111/j.1574-6941.2012.01309.x. Epub 2012 Feb 13.

38.

Identification of a new lipase family in the Brazilian Atlantic Forest soil metagenome.

Faoro H, Glogauer A, Souza EM, Rigo LU, Cruz LM, Monteiro RA, Pedrosa FO.

Environ Microbiol Rep. 2011 Dec;3(6):750-5. doi: 10.1111/j.1758-2229.2011.00295.x. Epub 2011 Oct 18.

PMID:
23761366
39.

Diversity of 16S rRNA genes from bacteria of sugarcane rhizosphere soil.

Pisa G, Magnani GS, Weber H, Souza EM, Faoro H, Monteiro RA, Daros E, Baura V, Bespalhok JP, Pedrosa FO, Cruz LM.

Braz J Med Biol Res. 2011 Dec;44(12):1215-21. Epub 2011 Nov 4.

40.

Genome sequence of the diazotrophic Gram-positive rhizobacterium Paenibacillus riograndensis SBR5(T).

Beneduzi A, Campos S, Ambrosini A, de Souza R, Granada C, Costa P, Arruda L, Moreira F, Vargas LK, Weiss V, Tieppo E, Faoro H, de Souza EM, Pedrosa FO, Passaglia LM.

J Bacteriol. 2011 Nov;193(22):6391-2. doi: 10.1128/JB.06100-11.

41.

Identification and characterization of a new true lipase isolated through metagenomic approach.

Glogauer A, Martini VP, Faoro H, Couto GH, Müller-Santos M, Monteiro RA, Mitchell DA, de Souza EM, Pedrosa FO, Krieger N.

Microb Cell Fact. 2011 Jul 15;10:54. doi: 10.1186/1475-2859-10-54.

42.

Verrucomicrobia in Brazilian Atlantic forest soil.

Thompson CC, da Fonseca EL, Vicente AC, de Oliveira Pedrosa F, Maltempi de Souza E, Faoro H.

Appl Environ Microbiol. 2011 Jun;77(11):3903-4. doi: 10.1128/AEM.02838-10. No abstract available.

43.

Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses.

Pedrosa FO, Monteiro RA, Wassem R, Cruz LM, Ayub RA, Colauto NB, Fernandez MA, Fungaro MH, Grisard EC, Hungria M, Madeira HM, Nodari RO, Osaku CA, Petzl-Erler ML, Terenzi H, Vieira LG, Steffens MB, Weiss VA, Pereira LF, Almeida MI, Alves LR, Marin A, Araujo LM, Balsanelli E, Baura VA, Chubatsu LS, Faoro H, Favetti A, Friedermann G, Glienke C, Karp S, Kava-Cordeiro V, Raittz RT, Ramos HJ, Ribeiro EM, Rigo LU, Rocha SN, Schwab S, Silva AG, Souza EM, Tadra-Sfeir MZ, Torres RA, Dabul AN, Soares MA, Gasques LS, Gimenes CC, Valle JS, Ciferri RR, Correa LC, Murace NK, Pamphile JA, Patussi EV, Prioli AJ, Prioli SM, Rocha CL, Arantes OM, Furlaneto MC, Godoy LP, Oliveira CE, Satori D, Vilas-Boas LA, Watanabe MA, Dambros BP, Guerra MP, Mathioni SM, Santos KL, Steindel M, Vernal J, Barcellos FG, Campo RJ, Chueire LM, Nicolás MF, Pereira-Ferrari L, Silva JL, Gioppo NM, Margarido VP, Menck-Soares MA, Pinto FG, Simão Rde C, Takahashi EK, Yates MG, Souza EM.

PLoS Genet. 2011 May;7(5):e1002064. doi: 10.1371/journal.pgen.1002064. Epub 2011 May 12.

44.

Naringenin regulates expression of genes involved in cell wall synthesis in Herbaspirillum seropedicae.

Tadra-Sfeir MZ, Souza EM, Faoro H, Müller-Santos M, Baura VA, Tuleski TR, Rigo LU, Yates MG, Wassem R, Pedrosa FO, Monteiro RA.

Appl Environ Microbiol. 2011 Mar;77(6):2180-3. doi: 10.1128/AEM.02071-10. Epub 2011 Jan 21.

45.

Influence of soil characteristics on the diversity of bacteria in the Southern Brazilian Atlantic Forest.

Faoro H, Alves AC, Souza EM, Rigo LU, Cruz LM, Al-Janabi SM, Monteiro RA, Baura VA, Pedrosa FO.

Appl Environ Microbiol. 2010 Jul;76(14):4744-9. doi: 10.1128/AEM.03025-09. Epub 2010 May 21.

46.

Isolation of a novel lipase from a metagenomic library derived from mangrove sediment from the south Brazilian coast.

Couto GH, Glogauer A, Faoro H, Chubatsu LS, Souza EM, Pedrosa FO.

Genet Mol Res. 2010 Mar 23;9(1):514-23. doi: 10.4238/vol9-1gmr738.

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