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Items: 7

1.

Tempest: GPU-CPU computing for high-throughput database spectral matching.

Milloy JA, Faherty BK, Gerber SA.

J Proteome Res. 2012 Jul 6;11(7):3581-91. doi: 10.1021/pr300338p. Epub 2012 Jun 8.

2.

Rapid determination of multiple linear kinase substrate motifs by mass spectrometry.

Kettenbach AN, Wang T, Faherty BK, Madden DR, Knapp S, Bailey-Kellogg C, Gerber SA.

Chem Biol. 2012 May 25;19(5):608-18. doi: 10.1016/j.chembiol.2012.04.011.

3.

Quantitative phosphoproteomics identifies substrates and functional modules of Aurora and Polo-like kinase activities in mitotic cells.

Kettenbach AN, Schweppe DK, Faherty BK, Pechenick D, Pletnev AA, Gerber SA.

Sci Signal. 2011 Jun 28;4(179):rs5. doi: 10.1126/scisignal.2001497.

4.
5.

Enhanced analysis of metastatic prostate cancer using stable isotopes and high mass accuracy instrumentation.

Everley PA, Bakalarski CE, Elias JE, Waghorne CG, Beausoleil SA, Gerber SA, Faherty BK, Zetter BR, Gygi SP.

J Proteome Res. 2006 May;5(5):1224-31.

PMID:
16674112
6.

Optimization and use of peptide mass measurement accuracy in shotgun proteomics.

Haas W, Faherty BK, Gerber SA, Elias JE, Beausoleil SA, Bakalarski CE, Li X, Villén J, Gygi SP.

Mol Cell Proteomics. 2006 Jul;5(7):1326-37. Epub 2006 Apr 23.

7.

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations.

Elias JE, Haas W, Faherty BK, Gygi SP.

Nat Methods. 2005 Sep;2(9):667-75.

PMID:
16118637

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