Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 48

1.

Enzymatic Analysis of Reconstituted Archaeal Exosomes.

Evguenieva-Hackenberg E, Gauernack AS, Hou L, Klug G.

Methods Mol Biol. 2020;2062:63-79. doi: 10.1007/978-1-4939-9822-7_4.

PMID:
31768972
2.

Rapid Biophysical Characterization and NMR Spectroscopy Structural Analysis of Small Proteins from Bacteria and Archaea.

Kubatova N, Pyper DJ, Jonker HRA, Saxena K, Remmel L, Richter C, Brantl S, Evguenieva-Hackenberg E, Hess WR, Klug G, Marchfelder A, Soppa J, Streit W, Mayzel M, Orekhov VY, Fuxreiter M, Schmitz RA, Schwalbe H.

Chembiochem. 2019 Nov 9. doi: 10.1002/cbic.201900677. [Epub ahead of print]

PMID:
31705614
3.

Transcription attenuation-derived small RNA rnTrpL regulates tryptophan biosynthesis gene expression in trans.

Melior H, Li S, Madhugiri R, Stötzel M, Azarderakhsh S, Barth-Weber S, Baumgardt K, Ziebuhr J, Evguenieva-Hackenberg E.

Nucleic Acids Res. 2019 Jul 9;47(12):6396-6410. doi: 10.1093/nar/gkz274.

4.

Nop5 interacts with the archaeal RNA exosome.

Gauernack AS, Lassek C, Hou L, Dzieciolowski J, Evguenieva-Hackenberg E, Klug G.

FEBS Lett. 2017 Dec;591(24):4039-4048. doi: 10.1002/1873-3468.12915. Epub 2017 Nov 28.

5.

The SmAP1/2 proteins of the crenarchaeon Sulfolobus solfataricus interact with the exosome and stimulate A-rich tailing of transcripts.

Märtens B, Hou L, Amman F, Wolfinger MT, Evguenieva-Hackenberg E, Bläsi U.

Nucleic Acids Res. 2017 Jul 27;45(13):7938-7949. doi: 10.1093/nar/gkx437.

6.

RNase E and RNase J are needed for S-adenosylmethionine homeostasis in Sinorhizobium meliloti.

Baumgardt K, Melior H, Madhugiri R, Thalmann S, Schikora A, McIntosh M, Becker A, Evguenieva-Hackenberg E.

Microbiology. 2017 Apr;163(4):570-583. doi: 10.1099/mic.0.000442. Epub 2017 Apr 26.

PMID:
28141492
7.

Conserved small mRNA with an unique, extended Shine-Dalgarno sequence.

Hahn J, Thalmann S, Migur A, von Boeselager RF, Kubatova N, Kubareva E, Schwalbe H, Evguenieva-Hackenberg E.

RNA Biol. 2017 Oct 3;14(10):1353-1363. doi: 10.1080/15476286.2016.1256534. Epub 2016 Nov 11.

8.

Small Open Reading Frames, Non-Coding RNAs and Repetitive Elements in Bradyrhizobium japonicum USDA 110.

Hahn J, Tsoy OV, Thalmann S, Čuklina J, Gelfand MS, Evguenieva-Hackenberg E.

PLoS One. 2016 Oct 27;11(10):e0165429. doi: 10.1371/journal.pone.0165429. eCollection 2016.

9.

Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.

Čuklina J, Hahn J, Imakaev M, Omasits U, Förstner KU, Ljubimov N, Goebel M, Pessi G, Fischer HM, Ahrens CH, Gelfand MS, Evguenieva-Hackenberg E.

BMC Genomics. 2016 Apr 23;17:302. doi: 10.1186/s12864-016-2602-9.

10.

The stress-related, rhizobial small RNA RcsR1 destabilizes the autoinducer synthase encoding mRNA sinI in Sinorhizobium meliloti.

Baumgardt K, Šmídová K, Rahn H, Lochnit G, Robledo M, Evguenieva-Hackenberg E.

RNA Biol. 2016 May 3;13(5):486-99. doi: 10.1080/15476286.2015.1110673. Epub 2015 Nov 20.

11.

Archaeal DnaG contains a conserved N-terminal RNA-binding domain and enables tailing of rRNA by the exosome.

Hou L, Klug G, Evguenieva-Hackenberg E.

Nucleic Acids Res. 2014 Nov 10;42(20):12691-706. doi: 10.1093/nar/gku969. Epub 2014 Oct 17.

12.

Riboregulation in plant-associated α-proteobacteria.

Becker A, Overlöper A, Schlüter JP, Reinkensmeier J, Robledo M, Giegerich R, Narberhaus F, Evguenieva-Hackenberg E.

RNA Biol. 2014;11(5):550-62. Epub 2014 Jul 8. Review.

13.

Structure and function of the archaeal exosome.

Evguenieva-Hackenberg E, Hou L, Glaeser S, Klug G.

Wiley Interdiscip Rev RNA. 2014 Sep-Oct;5(5):623-35. doi: 10.1002/wrna.1234. Epub 2014 Apr 30. Review.

PMID:
24789718
14.

RNase E affects the expression of the acyl-homoserine lactone synthase gene sinI in Sinorhizobium meliloti.

Baumgardt K, Charoenpanich P, McIntosh M, Schikora A, Stein E, Thalmann S, Kogel KH, Klug G, Becker A, Evguenieva-Hackenberg E.

J Bacteriol. 2014 Apr;196(7):1435-47. doi: 10.1128/JB.01471-13. Epub 2014 Jan 31.

15.

Homoserine lactones influence the reaction of plants to rhizobia.

Zarkani AA, Stein E, Röhrich CR, Schikora M, Evguenieva-Hackenberg E, Degenkolb T, Vilcinskas A, Klug G, Kogel KH, Schikora A.

Int J Mol Sci. 2013 Aug 20;14(8):17122-46. doi: 10.3390/ijms140817122.

16.

Attack from both ends: mRNA degradation in the crenarchaeon Sulfolobus solfataricus.

Evguenieva-Hackenberg E, Bläsi U.

Biochem Soc Trans. 2013 Feb 1;41(1):379-83. doi: 10.1042/BST20120282. Review.

PMID:
23356315
17.

The archaeal DnaG protein needs Csl4 for binding to the exosome and enhances its interaction with adenine-rich RNAs.

Hou L, Klug G, Evguenieva-Hackenberg E.

RNA Biol. 2013 Mar;10(3):415-24. doi: 10.4161/rna.23450. Epub 2013 Jan 16.

18.

Heterogeneous complexes of the RNA exosome in Sulfolobus solfataricus.

Witharana C, Roppelt V, Lochnit G, Klug G, Evguenieva-Hackenberg E.

Biochimie. 2012 Jul;94(7):1578-87. doi: 10.1016/j.biochi.2012.03.026. Epub 2012 Apr 7.

PMID:
22503705
19.

Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis.

Madhugiri R, Pessi G, Voss B, Hahn J, Sharma CM, Reinhardt R, Vogel J, Hess WR, Fischer HM, Evguenieva-Hackenberg E.

RNA Biol. 2012 Jan;9(1):47-58. doi: 10.4161/rna.9.1.18008. Epub 2012 Jan 1.

PMID:
22258152
20.

New aspects of RNA processing in prokaryotes.

Evguenieva-Hackenberg E, Klug G.

Curr Opin Microbiol. 2011 Oct;14(5):587-92. doi: 10.1016/j.mib.2011.07.025. Epub 2011 Sep 22. Review.

PMID:
21945217
21.

The archaeal exosome.

Evguenieva-Hackenberg E.

Adv Exp Med Biol. 2011;702:29-38. doi: 10.1007/978-1-4419-7841-7_3.

PMID:
21713675
22.

Subcellular localization of RNA degrading proteins and protein complexes in prokaryotes.

Evguenieva-Hackenberg E, Roppelt V, Lassek C, Klug G.

RNA Biol. 2011 Jan-Feb;8(1):49-54. Epub 2011 Jan 1.

23.

The evolutionarily conserved subunits Rrp4 and Csl4 confer different substrate specificities to the archaeal exosome.

Roppelt V, Klug G, Evguenieva-Hackenberg E.

FEBS Lett. 2010 Jul 2;584(13):2931-6. doi: 10.1016/j.febslet.2010.05.014. Epub 2010 May 17.

24.

The archaeal exosome localizes to the membrane.

Roppelt V, Hobel CF, Albers SV, Lassek C, Schwarz H, Klug G, Evguenieva-Hackenberg E.

FEBS Lett. 2010 Jul 2;584(13):2791-5. doi: 10.1016/j.febslet.2010.05.013. Epub 2010 May 17.

25.

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti.

Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A.

BMC Genomics. 2010 Apr 17;11:245. doi: 10.1186/1471-2164-11-245.

26.

The archaeal exosome.

Evguenieva-Hackenberg E.

Adv Exp Med Biol. 2010;702:29-38. Review.

PMID:
21618872
27.

Expression of small RNAs in Rhizobiales and protection of a small RNA and its degradation products by Hfq in Sinorhizobium meliloti.

Voss B, Hölscher M, Baumgarth B, Kalbfleisch A, Kaya C, Hess WR, Becker A, Evguenieva-Hackenberg E.

Biochem Biophys Res Commun. 2009 Dec 11;390(2):331-6. doi: 10.1016/j.bbrc.2009.09.125. Epub 2009 Oct 2.

PMID:
19800865
28.

RNase J is involved in the 5'-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti.

Madhugiri R, Evguenieva-Hackenberg E.

FEBS Lett. 2009 Jul 21;583(14):2339-42. doi: 10.1016/j.febslet.2009.06.026. Epub 2009 Jun 21.

29.

RNA degradation in Archaea and Gram-negative bacteria different from Escherichia coli.

Evguenieva-Hackenberg E, Klug G.

Prog Mol Biol Transl Sci. 2009;85:275-317. doi: 10.1016/S0079-6603(08)00807-6. Review.

PMID:
19215775
30.

In vivo and in vitro studies of RNA degrading activities in Archaea.

Evguenieva-Hackenberg E, Wagner S, Klug G.

Methods Enzymol. 2008;447:381-416. doi: 10.1016/S0076-6879(08)02219-2.

PMID:
19161853
31.

Rrp4 and Csl4 are needed for efficient degradation but not for polyadenylation of synthetic and natural RNA by the archaeal exosome.

Evguenieva-Hackenberg E, Roppelt V, Finsterseifer P, Klug G.

Biochemistry. 2008 Dec 16;47(50):13158-68. doi: 10.1021/bi8012214.

PMID:
19053279
32.

Characterization of native and reconstituted exosome complexes from the hyperthermophilic archaeon Sulfolobus solfataricus.

Walter P, Klein F, Lorentzen E, Ilchmann A, Klug G, Evguenieva-Hackenberg E.

Mol Microbiol. 2006 Nov;62(4):1076-89.

33.

RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus.

Portnoy V, Evguenieva-Hackenberg E, Klein F, Walter P, Lorentzen E, Klug G, Schuster G.

EMBO Rep. 2005 Dec;6(12):1188-93.

34.

Bacterial ribosomal RNA in pieces.

Evguenieva-Hackenberg E.

Mol Microbiol. 2005 Jul;57(2):318-25. Review.

35.

The archaeal exosome core is a hexameric ring structure with three catalytic subunits.

Lorentzen E, Walter P, Fribourg S, Evguenieva-Hackenberg E, Klug G, Conti E.

Nat Struct Mol Biol. 2005 Jul;12(7):575-81. Epub 2005 Jun 12.

PMID:
15951817
36.

Exoribonuclease R interacts with endoribonuclease E and an RNA helicase in the psychrotrophic bacterium Pseudomonas syringae Lz4W.

Purusharth RI, Klein F, Sulthana S, Jäger S, Jagannadham MV, Evguenieva-Hackenberg E, Ray MK, Klug G.

J Biol Chem. 2005 Apr 15;280(15):14572-8. Epub 2005 Feb 10.

37.

Temperature-dependent processing of the cspA mRNA in Rhodobacter capsulatus.

Jäger S, Evguenieva-Hackenberg E, Klug G.

Microbiology. 2004 Mar;150(Pt 3):687-695. doi: 10.1099/mic.0.26666-0.

PMID:
14993318
38.

An exosome-like complex in Sulfolobus solfataricus.

Evguenieva-Hackenberg E, Walter P, Hochleitner E, Lottspeich F, Klug G.

EMBO Rep. 2003 Sep;4(9):889-93. Epub 2003 Aug 29.

39.

RNase E is involved in 5'-end 23S rRNA processing in alpha-Proteobacteria.

Klein F, Evguenieva-Hackenberg E.

Biochem Biophys Res Commun. 2002 Dec 20;299(5):780-6.

PMID:
12470646
40.

Dehydrogenases from all three domains of life cleave RNA.

Evguenieva-Hackenberg E, Schiltz E, Klug G.

J Biol Chem. 2002 Nov 29;277(48):46145-50. Epub 2002 Sep 30.

41.
42.
43.
44.
46.

Characterization of Rhizobium 'hedysari' by RFLP analysis of PCR amplified rDNA and by genomic PCR fingerprinting.

Selenska-Pobell S, Evguenieva-Hackenberg E, Radeva G, Squartini A.

J Appl Bacteriol. 1996 May;80(5):517-28.

PMID:
9072524
47.

Variability of the 5'-end of the large subunit rDNA and presence of a new short class of rRNA in Rhizobiaceae.

Evguenieva-Hackenberg E, Selenska-Pobell S.

Lett Appl Microbiol. 1995 Dec;21(6):402-5.

PMID:
8554768
48.

Fragmentations of the large-subunit rRNA in the family Rhizobiaceae.

Selenska-Pobell S, Evguenieva-Hackenberg E.

J Bacteriol. 1995 Dec;177(23):6993-8.

Supplemental Content

Loading ...
Support Center