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Items: 1 to 50 of 104

1.

Oviposition Preference and Larval Performance of Drosophila suzukii (Diptera: Drosophilidae), Spotted-Wing Drosophila: Effects of Fruit Identity and Composition.

Olazcuaga L, Rode NO, Foucaud J, Facon B, Ravigné V, Ausset A, Leménager N, Loiseau A, Gautier M, Estoup A, Hufbauer RA.

Environ Entomol. 2019 Aug 5;48(4):867-881. doi: 10.1093/ee/nvz062.

PMID:
31157861
2.

ABC random forests for Bayesian parameter inference.

Raynal L, Marin JM, Pudlo P, Ribatet M, Robert CP, Estoup A.

Bioinformatics. 2019 May 15;35(10):1720-1728. doi: 10.1093/bioinformatics/bty867.

PMID:
30321307
3.

The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird.

Gautier M, Yamaguchi J, Foucaud J, Loiseau A, Ausset A, Facon B, Gschloessl B, Lagnel J, Loire E, Parrinello H, Severac D, Lopez-Roques C, Donnadieu C, Manno M, Berges H, Gharbi K, Lawson-Handley L, Zang LS, Vogel H, Estoup A, Prud'homme B.

Curr Biol. 2018 Oct 22;28(20):3296-3302.e7. doi: 10.1016/j.cub.2018.08.023. Epub 2018 Aug 23.

4.

Genetic structure and invasion history of the house mouse (Mus musculus domesticus) in Senegal, West Africa: a legacy of colonial and contemporary times.

Lippens C, Estoup A, Hima MK, Loiseau A, Tatard C, Dalecky A, Bâ K, Kane M, Diallo M, Sow A, Niang Y, Piry S, Berthier K, Leblois R, Duplantier JM, Brouat C.

Heredity (Edinb). 2017 Aug;119(2):64-75. doi: 10.1038/hdy.2017.18. Epub 2017 Mar 29.

5.

Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest.

Fraimout A, Debat V, Fellous S, Hufbauer RA, Foucaud J, Pudlo P, Marin JM, Price DK, Cattel J, Chen X, Deprá M, François Duyck P, Guedot C, Kenis M, Kimura MT, Loeb G, Loiseau A, Martinez-Sañudo I, Pascual M, Polihronakis Richmond M, Shearer P, Singh N, Tamura K, Xuéreb A, Zhang J, Estoup A.

Mol Biol Evol. 2017 Apr 1;34(4):980-996. doi: 10.1093/molbev/msx050.

6.

The Impact of Marijuana Legalization on Adolescent Use, Consequences, and Perceived Risk.

Estoup AC, Moise-Campbell C, Varma M, Stewart DG.

Subst Use Misuse. 2016 Dec 5;51(14):1881-7. doi: 10.1080/10826084.2016.1200623. Epub 2016 Sep 9.

PMID:
27612596
7.

Reliable ABC model choice via random forests.

Pudlo P, Marin JM, Estoup A, Cornuet JM, Gautier M, Robert CP.

Bioinformatics. 2016 Mar 15;32(6):859-66. doi: 10.1093/bioinformatics/btv684. Epub 2015 Nov 20.

PMID:
26589278
8.

Biological invasion and biological control select for different life histories.

Tayeh A, Hufbauer RA, Estoup A, Ravigné V, Frachon L, Facon B.

Nat Commun. 2015 Jun 2;6:7268. doi: 10.1038/ncomms8268.

9.

Complementarity of statistical treatments to reconstruct worldwide routes of invasion: the case of the Asian ladybird Harmonia axyridis.

Lombaert E, Guillemaud T, Lundgren J, Koch R, Facon B, Grez A, Loomans A, Malausa T, Nedved O, Rhule E, Staverlokk A, Steenberg T, Estoup A.

Mol Ecol. 2014 Dec;23(24):5979-97. doi: 10.1111/mec.12989. Epub 2014 Dec 11.

PMID:
25369988
10.

Evolutionary ecology of microsporidia associated with the invasive ladybird Harmonia axyridis.

Vilcinskas A, Schmidtberg H, Estoup A, Tayeh A, Facon B, Vogel H.

Insect Sci. 2015 Mar;22(3):313-24. doi: 10.1111/1744-7917.12159. Epub 2014 Nov 26. Review.

PMID:
25131382
11.

Invasion genetics of a human commensal rodent: the black rat Rattus rattus in Madagascar.

Brouat C, Tollenaere C, Estoup A, Loiseau A, Sommer S, Soanandrasana R, Rahalison L, Rajerison M, Piry S, Goodman SM, Duplantier JM.

Mol Ecol. 2014 Aug;23(16):4153-67. doi: 10.1111/mec.12848. Epub 2014 Jul 21.

PMID:
24975563
12.

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data.

Cornuet JM, Pudlo P, Veyssier J, Dehne-Garcia A, Gautier M, Leblois R, Marin JM, Estoup A.

Bioinformatics. 2014 Apr 15;30(8):1187-1189. Epub 2014 Jan 2.

PMID:
24389659
13.

Cannibalism in invasive, native and biocontrol populations of the harlequin ladybird.

Tayeh A, Estoup A, Lombaert E, Guillemaud T, Kirichenko N, Lawson-Handley L, De Clercq P, Facon B.

BMC Evol Biol. 2014 Feb 5;14:15. doi: 10.1186/1471-2148-14-15.

14.

Rapid increase in dispersal during range expansion in the invasive ladybird Harmonia axyridis.

Lombaert E, Estoup A, Facon B, Joubard B, Grégoire JC, Jannin A, Blin A, Guillemaud T.

J Evol Biol. 2014 Mar;27(3):508-17. doi: 10.1111/jeb.12316. Epub 2014 Jan 21.

15.

Increase in male reproductive success and female reproductive investment in invasive populations of the harlequin ladybird Harmonia axyridis.

Laugier GJ, Le Moguédec G, Tayeh A, Loiseau A, Osawa N, Estoup A, Facon B.

PLoS One. 2013 Oct 18;8(10):e77083. doi: 10.1371/journal.pone.0077083. eCollection 2013.

16.

Androgenesis is a maternal trait in the invasive ant Wasmannia auropunctata.

Rey O, Facon B, Foucaud J, Loiseau A, Estoup A.

Proc Biol Sci. 2013 Jul 17;280(1766):20131181. doi: 10.1098/rspb.2013.1181. Print 2013 Sep 7.

17.

Thermotolerance adaptation to human-modified habitats occurs in the native range of the invasive ant Wasmannia auropunctata before long-distance dispersal.

Foucaud J, Rey O, Robert S, Crespin L, Orivel J, Facon B, Loiseau A, Jourdan H, Kenne M, Masse PS, Tindo M, Vonshak M, Estoup A.

Evol Appl. 2013 Jun;6(4):721-34. doi: 10.1111/eva.12058. Epub 2013 Mar 11.

18.

Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping.

Gautier M, Foucaud J, Gharbi K, Cézard T, Galan M, Loiseau A, Thomson M, Pudlo P, Kerdelhué C, Estoup A.

Mol Ecol. 2013 Jul;22(14):3766-79. doi: 10.1111/mec.12360. Epub 2013 Jun 4.

PMID:
23730833
19.

Investigating the genetic load of an emblematic invasive species: the case of the invasive harlequin ladybird Harmonia axyridis.

Tayeh A, Estoup A, Hufbauer RA, Ravigne V, Goryacheva I, Zakharov IA, Lombaert E, Facon B.

Ecol Evol. 2013 Apr;3(4):864-71. doi: 10.1002/ece3.490. Epub 2013 Mar 1.

20.

Distribution of endosymbiotic reproductive manipulators reflects invasion process and not reproductive system polymorphism in the little fire ant Wasmannia auropunctata.

Rey O, Estoup A, Facon B, Loiseau A, Aebi A, Duron O, Vavre F, Foucaud J.

PLoS One. 2013;8(3):e58467. doi: 10.1371/journal.pone.0058467. Epub 2013 Mar 11.

21.

Invasion genetics of the introduced black rat (Rattus rattus) in Senegal, West Africa.

Konečný A, Estoup A, Duplantier JM, Bryja J, Bâ K, Galan M, Tatard C, Cosson JF.

Mol Ecol. 2013 Jan;22(2):286-300. doi: 10.1111/mec.12112. Epub 2012 Dec 3.

PMID:
23206272
22.

The effect of RAD allele dropout on the estimation of genetic variation within and between populations.

Gautier M, Gharbi K, Cezard T, Foucaud J, Kerdelhué C, Pudlo P, Cornuet JM, Estoup A.

Mol Ecol. 2013 Jun;22(11):3165-78. doi: 10.1111/mec.12089. Epub 2012 Oct 30.

PMID:
23110526
23.

Evolution in biocontrol strains: insight from the harlequin ladybird Harmonia axyridis.

Tayeh A, Estoup A, Laugier G, Loiseau A, Turgeon J, Toepfer S, Facon B.

Evol Appl. 2012 Jul;5(5):481-8. doi: 10.1111/j.1752-4571.2012.00274.x. Epub 2012 Jun 7.

24.

Where do adaptive shifts occur during invasion? A multidisciplinary approach to unravelling cold adaptation in a tropical ant species invading the Mediterranean area.

Rey O, Estoup A, Vonshak M, Loiseau A, Blanchet S, Calcaterra L, Chifflet L, Rossi JP, Kergoat GJ, Foucaud J, Orivel J, Leponce M, Schultz T, Facon B.

Ecol Lett. 2012 Nov;15(11):1266-1275. doi: 10.1111/j.1461-0248.2012.01849.x. Epub 2012 Aug 21.

PMID:
22906215
25.

Estimation of demo-genetic model probabilities with Approximate Bayesian Computation using linear discriminant analysis on summary statistics.

Estoup A, Lombaert E, Marin JM, Guillemaud T, Pudlo P, Robert CP, Cornuet JM.

Mol Ecol Resour. 2012 Sep;12(5):846-55. doi: 10.1111/j.1755-0998.2012.03153.x. Epub 2012 May 9.

PMID:
22571382
26.

Anthropogenically induced adaptation to invade (AIAI): contemporary adaptation to human-altered habitats within the native range can promote invasions.

Hufbauer RA, Facon B, Ravigné V, Turgeon J, Foucaud J, Lee CE, Rey O, Estoup A.

Evol Appl. 2012 Jan;5(1):89-101. doi: 10.1111/j.1752-4571.2011.00211.x. Epub 2011 Nov 2.

27.

Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis.

Lombaert E, Guillemaud T, Thomas CE, Lawson Handley LJ, Li J, Wang S, Pang H, Goryacheva I, Zakharov IA, Jousselin E, Poland RL, Migeon A, Van Lenteren J, DE Clercq P, Berkvens N, Jones W, Estoup A.

Mol Ecol. 2011 Nov;20(22):4654-70. doi: 10.1111/j.1365-294X.2011.05322.x. Epub 2011 Oct 18.

PMID:
22004292
28.

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus.

Estoup A, Baird SJ, Ray N, Currat M, Cornuet JM, Santos F, Beaumont MA, Excoffier L.

Mol Ecol Resour. 2010 Sep;10(5):886-901. doi: 10.1111/j.1755-0998.2010.02882.x. Epub 2010 Jun 2.

PMID:
21565099
29.

Meiotic recombination dramatically decreased in thelytokous queens of the little fire ant and their sexually produced workers.

Rey O, Loiseau A, Facon B, Foucaud J, Orivel J, Cornuet JM, Robert S, Dobigny G, Delabie JH, Mariano Cdos S, Estoup A.

Mol Biol Evol. 2011 Sep;28(9):2591-601. doi: 10.1093/molbev/msr082. Epub 2011 Mar 31.

PMID:
21459760
30.

Biological invasions in agricultural settings: insights from evolutionary biology and population genetics.

Guillemaud T, Ciosi M, Lombaert E, Estoup A.

C R Biol. 2011 Mar;334(3):237-46. doi: 10.1016/j.crvi.2010.12.008. Epub 2011 Feb 1. Review.

PMID:
21377619
31.

Experimental evidence for the phenotypic impact of admixture between wild and biocontrol Asian ladybird (Harmonia axyridis) involved in the European invasion.

Turgeon J, Tayeh A, Facon B, Lombaert E, De Clercq P, Berkvens N, Lundgren JG, Estoup A.

J Evol Biol. 2011 May;24(5):1044-52. doi: 10.1111/j.1420-9101.2011.02234.x. Epub 2011 Feb 22.

32.

Inbreeding depression is purged in the invasive insect Harmonia axyridis.

Facon B, Hufbauer RA, Tayeh A, Loiseau A, Lombaert E, Vitalis R, Guillemaud T, Lundgren JG, Estoup A.

Curr Biol. 2011 Mar 8;21(5):424-7. doi: 10.1016/j.cub.2011.01.068. Epub 2011 Feb 17.

33.

Can things get worse when an invasive species hybridizes? The harlequin ladybird Harmonia axyridis in France as a case study.

Facon B, Crespin L, Loiseau A, Lombaert E, Magro A, Estoup A.

Evol Appl. 2011 Jan;4(1):71-88. doi: 10.1111/j.1752-4571.2010.00134.x. Epub 2010 Jun 7.

34.

Stratified dispersal and increasing genetic variation during the invasion of Central Europe by the western corn rootworm, Diabrotica virgifera virgifera.

Ciosi M, Miller NJ, Toepfer S, Estoup A, Guillemaud T.

Evol Appl. 2011 Jan;4(1):54-70. doi: 10.1111/j.1752-4571.2010.00133.x. Epub 2010 Jun 7.

35.

Reconstructing routes of invasion using genetic data: why, how and so what?

Estoup A, Guillemaud T.

Mol Ecol. 2010 Oct;19(19):4113-30. doi: 10.1111/j.1365-294X.2010.04773.x. Epub 2010 Aug 13. Review.

PMID:
20723048
36.

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0).

Cornuet JM, Ravigné V, Estoup A.

BMC Bioinformatics. 2010 Jul 28;11:401. doi: 10.1186/1471-2105-11-401.

37.

Worldwide invasion by the little fire ant: routes of introduction and eco-evolutionary pathways.

Foucaud J, Orivel J, Loiseau A, Delabie JH, Jourdan H, Konghouleux D, Vonshak M, Tindo M, Mercier JL, Fresneau D, Mikissa JB, McGlynn T, Mikheyev AS, Oettler J, Estoup A.

Evol Appl. 2010 Jul;3(4):363-74. doi: 10.1111/j.1752-4571.2010.00119.x. Epub 2010 Feb 2.

38.

Bridgehead effect in the worldwide invasion of the biocontrol harlequin ladybird.

Lombaert E, Guillemaud T, Cornuet JM, Malausa T, Facon B, Estoup A.

PLoS One. 2010 Mar 17;5(3):e9743. doi: 10.1371/journal.pone.0009743.

39.

In defence of model-based inference in phylogeography.

Beaumont MA, Nielsen R, Robert C, Hey J, Gaggiotti O, Knowles L, Estoup A, Panchal M, Corander J, Hickerson M, Sisson SA, Fagundes N, Chikhi L, Beerli P, Vitalis R, Cornuet JM, Huelsenbeck J, Foll M, Yang Z, Rousset F, Balding D, Excoffier L.

Mol Ecol. 2010 Feb;19(3):436-446. doi: 10.1111/j.1365-294X.2009.04515.x. Epub 2010 Jan 11.

40.

Reproductive system, social organization, human disturbance and ecological dominance in native populations of the little fire ant, Wasmannia auropunctata.

Foucaud J, Orivel J, Fournier D, Delabie JH, Loiseau A, Le Breton J, Cerdan P, Estoup A.

Mol Ecol. 2009 Dec;18(24):5059-73. doi: 10.1111/j.1365-294X.2009.04440.x. Epub 2009 Nov 20.

PMID:
19943889
41.

Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab.

Foucaud J, Estoup A, Loiseau A, Rey O, Orivel J.

Heredity (Edinb). 2010 Aug;105(2):205-12. doi: 10.1038/hdy.2009.169. Epub 2009 Nov 25.

42.

Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data.

Guillemaud T, Beaumont MA, Ciosi M, Cornuet JM, Estoup A.

Heredity (Edinb). 2010 Jan;104(1):88-99. doi: 10.1038/hdy.2009.92.

43.

Parental crowding influences life-history traits in Locusta migratoria females.

Chapuis MP, Crespin L, Estoup A, Augé-Sabatier A, Foucart A, Lecoq M, Michalakis Y.

Bull Entomol Res. 2010 Feb;100(1):9-17. doi: 10.1017/S0007485309006853. Epub 2009 May 5.

PMID:
19413914
44.

Isolation and characterization of microsatellites in the harlequin ladybird, Harmonia axyridis (Coleoptera, Coccinellidae), and cross-species amplification within the family Coccinellidae.

Loiseau A, Malausa T, Lombaert E, Martin JF, Estoup A.

Mol Ecol Resour. 2009 May;9(3):934-7. doi: 10.1111/j.1755-0998.2009.02517.x. Epub 2009 Jan 22.

PMID:
21564796
45.

Outbreaks, gene flow and effective population size in the migratory locust, Locusta migratoria: a regional-scale comparative survey.

Chapuis MP, Loiseau A, Michalakis Y, Lecoq M, Franc A, Estoup A.

Mol Ecol. 2009 Mar;18(5):792-800. doi: 10.1111/j.1365-294X.2008.04072.x.

PMID:
19207256
46.

Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa.

Verdu P, Austerlitz F, Estoup A, Vitalis R, Georges M, Théry S, Froment A, Le Bomin S, Gessain A, Hombert JM, Van der Veen L, Quintana-Murci L, Bahuchet S, Heyer E.

Curr Biol. 2009 Feb 24;19(4):312-8. doi: 10.1016/j.cub.2008.12.049. Epub 2009 Feb 5.

47.

Spatial genetic structure of a small rodent in a heterogeneous landscape.

Gauffre B, Estoup A, Bretagnolle V, Cosson JF.

Mol Ecol. 2008 Nov;17(21):4619-29. doi: 10.1111/j.1365-294X.2008.03950.x.

PMID:
19140985
48.

IBDSim: a computer program to simulate genotypic data under isolation by distance.

Leblois R, Estoup A, Rousset F.

Mol Ecol Resour. 2009 Jan;9(1):107-9. doi: 10.1111/j.1755-0998.2008.02417.x. Epub 2008 Nov 10.

PMID:
21564573
49.

Eight polymorphic microsatellite loci for the Australian plague locust, Chortoicetes terminifera.

Chapuis MP, Popple JA, Simpson SJ, Estoup A, Martin JF, Steinbauer M, McCulloch L, Sword GA.

Mol Ecol Resour. 2008 Nov;8(6):1414-6. doi: 10.1111/j.1755-0998.2008.02204.x. Epub 2008 Sep 15.

PMID:
21586062
50.

Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation.

Cornuet JM, Santos F, Beaumont MA, Robert CP, Marin JM, Balding DJ, Guillemaud T, Estoup A.

Bioinformatics. 2008 Dec 1;24(23):2713-9. doi: 10.1093/bioinformatics/btn514. Epub 2008 Oct 7.

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