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Items: 25

1.

European sea bass brain DLB-1 cell line is susceptible to nodavirus: A transcriptomic study.

Chaves-Pozo E, Bandín I, Olveira JG, Esteve-Codina A, Gómez-Garrido J, Dabad M, Alioto T, Ángeles Esteban M, Cuesta A.

Fish Shellfish Immunol. 2018 Nov 11. pii: S1050-4648(18)30743-5. doi: 10.1016/j.fsi.2018.11.024. [Epub ahead of print]

PMID:
30428392
2.

A FBN1 3'UTR mutation variant is associated with endoplasmic reticulum stress in aortic aneurysm in Marfan syndrome.

Siegert AM, García Díaz-Barriga G, Esteve-Codina A, Navas-Madroñal M, Gorbenko Del Blanco D, Alberch J, Heath S, Galán M, Egea G.

Biochim Biophys Acta Mol Basis Dis. 2018 Oct 30;1865(1):107-114. doi: 10.1016/j.bbadis.2018.10.029. [Epub ahead of print]

PMID:
30385411
3.

Genetic Abnormalities in Large to Giant Congenital Nevi: Beyond NRAS mutations.

Martins da Silva V, Martinez-Barrios E, Tell-Martí G, Dabad M, Carrera C, Aguilera P, Brualla D, Esteve-Codina A, Vicente A, Puig S, Puig-Butillé JA, Malvehy J.

J Invest Dermatol. 2018 Oct 22. pii: S0022-202X(18)32683-6. doi: 10.1016/j.jid.2018.07.045. [Epub ahead of print]

PMID:
30359577
4.

Dose-dependent transcriptomic responses of zebrafish eleutheroembryos to Bisphenol A.

Martínez R, Esteve-Codina A, Herrero-Nogareda L, Ortiz-Villanueva E, Barata C, Tauler R, Raldúa D, Piña B, Navarro-Martín L.

Environ Pollut. 2018 Dec;243(Pt B):988-997. doi: 10.1016/j.envpol.2018.09.043. Epub 2018 Sep 11.

PMID:
30248606
5.

Deep analysis of acquired resistance to FGFR1 inhibitor identifies MET and AKT activation and an expansion of AKT1 mutant cells.

Gimenez-Xavier P, Pros E, Aza A, Moran S, Tonda R, Esteve-Codina A, Dabad M, Sanchez-Cespedes M.

Oncotarget. 2018 Jul 31;9(59):31549-31558. doi: 10.18632/oncotarget.25862. eCollection 2018 Jul 31.

6.

Consistent inverse correlation between DNA methylation of the first intron and gene expression across tissues and species.

Anastasiadi D, Esteve-Codina A, Piferrer F.

Epigenetics Chromatin. 2018 Jun 29;11(1):37. doi: 10.1186/s13072-018-0205-1.

7.

MET-Oncogenic and JAK2-Inactivating Alterations Are Independent Factors That Affect Regulation of PD-L1 Expression in Lung Cancer.

Saigi M, Alburquerque-Bejar JJ, Mc Leer-Florin A, Pereira C, Pros E, Romero OA, Baixeras N, Esteve-Codina A, Nadal E, Brambilla E, Sanchez-Cespedes M.

Clin Cancer Res. 2018 Sep 15;24(18):4579-4587. doi: 10.1158/1078-0432.CCR-18-0267. Epub 2018 Jun 13.

PMID:
29898990
8.

Transcriptional alterations in skin fibroblasts from Parkinson's disease patients with parkin mutations.

González-Casacuberta I, Morén C, Juárez-Flores DL, Esteve-Codina A, Sierra C, Catalán-García M, Guitart-Mampel M, Tobías E, Milisenda JC, Pont-Sunyer C, Martí MJ, Cardellach F, Tolosa E, Artuch R, Ezquerra M, Fernández-Santiago R, Garrabou G.

Neurobiol Aging. 2018 May;65:206-216. doi: 10.1016/j.neurobiolaging.2018.01.021. Epub 2018 Feb 7. Erratum in: Neurobiol Aging. 2018 Sep;69:300.

PMID:
29501959
9.

Hypoxia-mediated translational activation of ITGB3 in breast cancer cells enhances TGF-β signaling and malignant features in vitro and in vivo.

Sesé M, Fuentes P, Esteve-Codina A, Béjar E, McGrail K, Thomas G, Aasen T, Ramón Y Cajal S.

Oncotarget. 2017 Dec 12;8(70):114856-114876. doi: 10.18632/oncotarget.23145. eCollection 2017 Dec 29.

10.

Innate Cell-Mediated Cytotoxic Activity of European Sea Bass Leucocytes Against Nodavirus-Infected Cells: A Functional and RNA-seq Study.

Chaves-Pozo E, Valero Y, Esteve-Codina A, Gómez-Garrido J, Dabad M, Alioto T, Meseguer J, Esteban MÁ, Cuesta A.

Sci Rep. 2017 Nov 13;7(1):15396. doi: 10.1038/s41598-017-15629-6.

11.

Tumor-associated macrophages (TAMs) depend on ZEB1 for their cancer-promoting roles.

Cortés M, Sanchez-Moral L, de Barrios O, Fernández-Aceñero MJ, Martínez-Campanario MC, Esteve-Codina A, Darling DS, Győrffy B, Lawrence T, Dean DC, Postigo A.

EMBO J. 2017 Nov 15;36(22):3336-3355. doi: 10.15252/embj.201797345. Epub 2017 Oct 16.

12.

Histone H1 depletion triggers an interferon response in cancer cells via activation of heterochromatic repeats.

Izquierdo-Bouldstridge A, Bustillos A, Bonet-Costa C, Aribau-Miralbés P, García-Gomis D, Dabad M, Esteve-Codina A, Pascual-Reguant L, Peiró S, Esteller M, Murtha M, Millán-Ariño L, Jordan A.

Nucleic Acids Res. 2017 Nov 16;45(20):11622-11642. doi: 10.1093/nar/gkx746.

13.

Transcriptional mechanisms underlying life-history responses to climate change in the three-spined stickleback.

Kim SY, Costa MM, Esteve-Codina A, Velando A.

Evol Appl. 2017 May 15;10(7):718-730. doi: 10.1111/eva.12487. eCollection 2017 Aug.

14.

Wolf-Hirschhorn Syndrome Candidate 1 Is Necessary for Correct Hematopoietic and B Cell Development.

Campos-Sanchez E, Deleyto-Seldas N, Dominguez V, Carrillo-de-Santa-Pau E, Ura K, Rocha PP, Kim J, Aljoufi A, Esteve-Codina A, Dabad M, Gut M, Heyn H, Kaneda Y, Nimura K, Skok JA, Martinez-Frias ML, Cobaleda C.

Cell Rep. 2017 May 23;19(8):1586-1601. doi: 10.1016/j.celrep.2017.04.069.

15.

Genomic and Molecular Screenings Identify Different Mechanisms for Acquired Resistance to MET Inhibitors in Lung Cancer Cells.

Gimenez-Xavier P, Pros E, Bonastre E, Moran S, Aza A, Graña O, Gomez-Lopez G, Derdak S, Dabad M, Esteve-Codina A, Hernandez Mora JR, Salinas-Chaparro D, Esteller M, Pisano D, Sanchez-Cespedes M.

Mol Cancer Ther. 2017 Jul;16(7):1366-1376. doi: 10.1158/1535-7163.MCT-17-0104. Epub 2017 Apr 10.

16.

A Comparison of RNA-Seq Results from Paired Formalin-Fixed Paraffin-Embedded and Fresh-Frozen Glioblastoma Tissue Samples.

Esteve-Codina A, Arpi O, Martinez-García M, Pineda E, Mallo M, Gut M, Carrato C, Rovira A, Lopez R, Tortosa A, Dabad M, Del Barco S, Heath S, Bagué S, Ribalta T, Alameda F, de la Iglesia N, Balaña C; GLIOCAT Group.

PLoS One. 2017 Jan 25;12(1):e0170632. doi: 10.1371/journal.pone.0170632. eCollection 2017.

17.

Sequence variation between 462 human individuals fine-tunes functional sites of RNA processing.

Ferreira PG, Oti M, Barann M, Wieland T, Ezquina S, Friedländer MR, Rivas MA, Esteve-Codina A; GEUVADIS Consortium, Rosenstiel P, Strom TM, Lappalainen T, Guigó R, Sammeth M.

Sci Rep. 2016 Sep 12;6:32406. doi: 10.1038/srep32406.

18.

From SNP co-association to RNA co-expression: novel insights into gene networks for intramuscular fatty acid composition in porcine.

Ramayo-Caldas Y, Ballester M, Fortes MR, Esteve-Codina A, Castelló A, Noguera JL, Fernández AI, Pérez-Enciso M, Reverter A, Folch JM.

BMC Genomics. 2014 Mar 26;15:232. doi: 10.1186/1471-2164-15-232.

19.

Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.

Esteve-Codina A, Paudel Y, Ferretti L, Raineri E, Megens HJ, Silió L, Rodríguez MC, Groenen MA, Ramos-Onsins SE, Pérez-Enciso M.

BMC Genomics. 2013 Mar 5;14:148. doi: 10.1186/1471-2164-14-148.

20.

Porcine colonization of the Americas: a 60k SNP story.

Burgos-Paz W, Souza CA, Megens HJ, Ramayo-Caldas Y, Melo M, Lemús-Flores C, Caal E, Soto HW, Martínez R, Alvarez LA, Aguirre L, Iñiguez V, Revidatti MA, Martínez-López OR, Llambi S, Esteve-Codina A, Rodríguez MC, Crooijmans RP, Paiva SR, Schook LB, Groenen MA, Pérez-Enciso M.

Heredity (Edinb). 2013 Apr;110(4):321-30. doi: 10.1038/hdy.2012.109. Epub 2012 Dec 19.

21.

Liver transcriptome profile in pigs with extreme phenotypes of intramuscular fatty acid composition.

Ramayo-Caldas Y, Mach N, Esteve-Codina A, Corominas J, Castelló A, Ballester M, Estellé J, Ibáñez-Escriche N, Fernández AI, Pérez-Enciso M, Folch JM.

BMC Genomics. 2012 Oct 11;13:547. doi: 10.1186/1471-2164-13-547.

22.

SNP calling by sequencing pooled samples.

Raineri E, Ferretti L, Esteve-Codina A, Nevado B, Heath S, Pérez-Enciso M.

BMC Bioinformatics. 2012 Sep 20;13:239. doi: 10.1186/1471-2105-13-239.

23.

Exploring the gonad transcriptome of two extreme male pigs with RNA-seq.

Esteve-Codina A, Kofler R, Palmieri N, Bussotti G, Notredame C, Pérez-Enciso M.

BMC Genomics. 2011 Nov 8;12:552. doi: 10.1186/1471-2164-12-552.

24.

Partial short-read sequencing of a highly inbred Iberian pig and genomics inference thereof.

Esteve-Codina A, Kofler R, Himmelbauer H, Ferretti L, Vivancos AP, Groenen MA, Folch JM, Rodríguez MC, Pérez-Enciso M.

Heredity (Edinb). 2011 Sep;107(3):256-64. doi: 10.1038/hdy.2011.13. Epub 2011 Mar 16.

25.

"GenderPlex" a PCR multiplex for reliable gender determination of degraded human DNA samples and complex gender constellations.

Esteve Codina A, Niederstätter H, Parson W.

Int J Legal Med. 2009 Nov;123(6):459-64. doi: 10.1007/s00414-008-0301-z. Epub 2008 Dec 17.

PMID:
19089439

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