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Items: 36

1.

Expanding the CRISPR Toolbox with ErCas12a in Zebrafish and Human Cells.

Wierson WA, Simone BW, WareJoncas Z, Mann C, Welker JM, Kar B, Emch MJ, Friedberg I, Gendron WAC, Barry MA, Clark KJ, Dobbs DL, McGrail MA, Ekker SC, Essner JJ.

CRISPR J. 2019 Nov 19. doi: 10.1089/crispr.2019.0026. [Epub ahead of print]

PMID:
31742435
2.

The Gene Sculpt Suite: a set of tools for genome editing.

Mann CM, Martínez-Gálvez G, Welker JM, Wierson WA, Ata H, Almeida MP, Clark KJ, Essner JJ, McGrail M, Ekker SC, Dobbs D.

Nucleic Acids Res. 2019 Jul 2;47(W1):W175-W182. doi: 10.1093/nar/gkz405.

3.

Xenotransplantation of adult hippocampal neural progenitors into the developing zebrafish for assessment of stem cell plasticity.

Sandquist EJ, Essner JJ, Sakaguchi DS.

PLoS One. 2018 May 24;13(5):e0198025. doi: 10.1371/journal.pone.0198025. eCollection 2018.

4.

Molecular Regulation of Sprouting Angiogenesis.

Duran CL, Howell DW, Dave JM, Smith RL, Torrie ME, Essner JJ, Bayless KJ.

Compr Physiol. 2017 Dec 12;8(1):153-235. doi: 10.1002/cphy.c160048. Review.

PMID:
29357127
5.

3D MALDI Mass Spectrometry Imaging of a Single Cell: Spatial Mapping of Lipids in the Embryonic Development of Zebrafish.

Dueñas ME, Essner JJ, Lee YJ.

Sci Rep. 2017 Nov 2;7(1):14946. doi: 10.1038/s41598-017-14949-x.

6.

GoldyTALEN Vectors with Improved Efficiency for Golden Gate TALEN Assembly.

Welker JM, Wierson WA, Wang Y, Poshusta TL, McNulty MS, Tisdale EE, Solin SL, Ekker SC, Clark KJ, McGrail M, Essner JJ.

Hum Gene Ther. 2016 Jun;27(6):423-4. doi: 10.1089/hum.2016.012. Epub 2016 May 6. No abstract available.

7.

Rapid tumor induction in zebrafish by TALEN-mediated somatic inactivation of the retinoblastoma1 tumor suppressor rb1.

Solin SL, Shive HR, Woolard KD, Essner JJ, McGrail M.

Sci Rep. 2015 Sep 8;5:13745. doi: 10.1038/srep13745.

8.

Genome editing using TALENs in blind Mexican Cavefish, Astyanax mexicanus.

Ma L, Jeffery WR, Essner JJ, Kowalko JE.

PLoS One. 2015 Mar 16;10(3):e0119370. doi: 10.1371/journal.pone.0119370. eCollection 2015.

9.

Etv2 and fli1b function together as key regulators of vasculogenesis and angiogenesis.

Craig MP, Grajevskaja V, Liao HK, Balciuniene J, Ekker SC, Park JS, Essner JJ, Balciunas D, Sumanas S.

Arterioscler Thromb Vasc Biol. 2015 Apr;35(4):865-76. doi: 10.1161/ATVBAHA.114.304768. Epub 2015 Feb 26.

10.

TALEN-mediated gene editing of the thrombospondin-1 locus in axolotl.

Kuo TH, Kowalko JE, DiTommaso T, Nyambi M, Montoro DT, Essner JJ, Whited JL.

Regeneration (Oxf). 2015 Apr 8;2(1):37-43. doi: 10.1002/reg2.29. eCollection 2015 Feb.

11.

Molecular and cellular characterization of a zebrafish optic pathway tumor line implicates glia-derived progenitors in tumorigenesis.

Solin SL, Wang Y, Mauldin J, Schultz LE, Lincow DE, Brodskiy PA, Jones CA, Syrkin-Nikolau J, Linn JM, Essner JJ, Hostetter JM, Whitley EM, Cameron JD, Chou HH, Severin AJ, Sakaguchi DS, McGrail M.

PLoS One. 2014 Dec 8;9(12):e114888. doi: 10.1371/journal.pone.0114888. eCollection 2014.

12.

In vivo genome editing using a high-efficiency TALEN system.

Bedell VM, Wang Y, Campbell JM, Poshusta TL, Starker CG, Krug RG 2nd, Tan W, Penheiter SG, Ma AC, Leung AY, Fahrenkrug SC, Carlson DF, Voytas DF, Clark KJ, Essner JJ, Ekker SC.

Nature. 2012 Nov 1;491(7422):114-8. doi: 10.1038/nature11537. Epub 2012 Sep 23.

13.

Tol2 gene trap integrations in the zebrafish amyloid precursor protein genes appa and aplp2 reveal accumulation of secreted APP at the embryonic veins.

Liao HK, Wang Y, Noack Watt KE, Wen Q, Breitbach J, Kemmet CK, Clark KJ, Ekker SC, Essner JJ, McGrail M.

Dev Dyn. 2012 Feb;241(2):415-25. doi: 10.1002/dvdy.23725.

14.

Somatic mutagenesis with a Sleeping Beauty transposon system leads to solid tumor formation in zebrafish.

McGrail M, Hatler JM, Kuang X, Liao HK, Nannapaneni K, Watt KE, Uhl JD, Largaespada DA, Vollbrecht E, Scheetz TE, Dupuy AJ, Hostetter JM, Essner JJ.

PLoS One. 2011 Apr 21;6(4):e18826. doi: 10.1371/journal.pone.0018826.

15.

Use of RecA fusion proteins to induce genomic modifications in zebrafish.

Liao HK, Essner JJ.

Nucleic Acids Res. 2011 May;39(10):4166-79. doi: 10.1093/nar/gkq1363. Epub 2011 Jan 25.

16.

Moesin1 and Ve-cadherin are required in endothelial cells during in vivo tubulogenesis.

Wang Y, Kaiser MS, Larson JD, Nasevicius A, Clark KJ, Wadman SA, Roberg-Perez SE, Ekker SC, Hackett PB, McGrail M, Essner JJ.

Development. 2010 Sep;137(18):3119-28. doi: 10.1242/dev.048785.

17.

SCORE imaging: specimen in a corrected optical rotational enclosure.

Petzold AM, Bedell VM, Boczek NJ, Essner JJ, Balciunas D, Clark KJ, Ekker SC.

Zebrafish. 2010 Jun;7(2):149-54. doi: 10.1089/zeb.2010.0660.

18.

Expression of the zebrafish CD133/prominin1 genes in cellular proliferation zones in the embryonic central nervous system and sensory organs.

McGrail M, Batz L, Noack K, Pandey S, Huang Y, Gu X, Essner JJ.

Dev Dyn. 2010 Jun;239(6):1849-57. doi: 10.1002/dvdy.22307.

19.

A gap junction connexin is required in the vertebrate left-right organizer.

Hatler JM, Essner JJ, Johnson RG.

Dev Biol. 2009 Dec 15;336(2):183-91. doi: 10.1016/j.ydbio.2009.09.035. Epub 2009 Sep 30.

20.

Zebrafish RNase T2 genes and the evolution of secretory ribonucleases in animals.

Hillwig MS, Rizhsky L, Wang Y, Umanskaya A, Essner JJ, MacIntosh GC.

BMC Evol Biol. 2009 Jul 20;9:170. doi: 10.1186/1471-2148-9-170.

21.

Combination of reverse and chemical genetic screens reveals angiogenesis inhibitors and targets.

Kalén M, Wallgard E, Asker N, Nasevicius A, Athley E, Billgren E, Larson JD, Wadman SA, Norseng E, Clark KJ, He L, Karlsson-Lindahl L, Häger AK, Weber H, Augustin H, Samuelsson T, Kemmet CK, Utesch CM, Essner JJ, Hackett PB, Hellström M.

Chem Biol. 2009 Apr 24;16(4):432-41. doi: 10.1016/j.chembiol.2009.02.010.

22.

Transient axonal glycoprotein-1 (TAG-1) and laminin-alpha1 regulate dynamic growth cone behaviors and initial axon direction in vivo.

Wolman MA, Sittaramane VK, Essner JJ, Yost HJ, Chandrasekhar A, Halloran MC.

Neural Dev. 2008 Feb 20;3:6. doi: 10.1186/1749-8104-3-6.

23.

CXCR7 (RDC1) promotes breast and lung tumor growth in vivo and is expressed on tumor-associated vasculature.

Miao Z, Luker KE, Summers BC, Berahovich R, Bhojani MS, Rehemtulla A, Kleer CG, Essner JJ, Nasevicius A, Luker GD, Howard MC, Schall TJ.

Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15735-40. Epub 2007 Sep 26.

24.

Syndecan-2.

Essner JJ, Chen E, Ekker SC.

Int J Biochem Cell Biol. 2006 Feb;38(2):152-6. Epub 2005 Sep 15. Review.

PMID:
16198615
25.

Awakening gene therapy with Sleeping Beauty transposons.

Essner JJ, McIvor RS, Hackett PB.

Curr Opin Pharmacol. 2005 Oct;5(5):513-9. Review.

PMID:
16084771
26.

Kupffer's vesicle is a ciliated organ of asymmetry in the zebrafish embryo that initiates left-right development of the brain, heart and gut.

Essner JJ, Amack JD, Nyholm MK, Harris EB, Yost HJ.

Development. 2005 Mar;132(6):1247-60. Epub 2005 Feb 16.

27.

Expression of VE-cadherin in zebrafish embryos: a new tool to evaluate vascular development.

Larson JD, Wadman SA, Chen E, Kerley L, Clark KJ, Eide M, Lippert S, Nasevicius A, Ekker SC, Hackett PB, Essner JJ.

Dev Dyn. 2004 Sep;231(1):204-13.

28.

Conserved function for embryonic nodal cilia.

Essner JJ, Vogan KJ, Wagner MK, Tabin CJ, Yost HJ, Brueckner M.

Nature. 2002 Jul 4;418(6893):37-8.

PMID:
12097899
29.

The left-right determinant inversin has highly conserved ankyrin repeat and IQ domains and interacts with calmodulin.

Morgan D, Goodship J, Essner JJ, Vogan KJ, Turnpenny L, Yost HJ, Tabin CJ, Strachan T.

Hum Genet. 2002 Apr;110(4):377-84. Epub 2002 Mar 2.

PMID:
11941489
30.

Multiple pathways in the midline regulate concordant brain, heart and gut left-right asymmetry.

Bisgrove BW, Essner JJ, Yost HJ.

Development. 2000 Aug;127(16):3567-79.

31.
32.

Mesendoderm and left-right brain, heart and gut development are differentially regulated by pitx2 isoforms.

Essner JJ, Branford WW, Zhang J, Yost HJ.

Development. 2000 Mar;127(5):1081-93.

34.

Regulation of midline development by antagonism of lefty and nodal signaling.

Bisgrove BW, Essner JJ, Yost HJ.

Development. 1999 Jun;126(14):3253-62.

35.

The zebrafish thyroid hormone receptor alpha 1 is expressed during early embryogenesis and can function in transcriptional repression.

Essner JJ, Breuer JJ, Essner RD, Fahrenkrug SC, Hackett PB Jr.

Differentiation. 1997 Dec;62(3):107-17.

PMID:
9447705
36.

Expression of zebrafish connexin43.4 in the notochord and tail bud of wild-type and mutant no tail embryos.

Essner JJ, Laing JG, Beyer EC, Johnson RG, Hackett PB Jr.

Dev Biol. 1996 Aug 1;177(2):449-62.

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