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Molecular Testing of Serial Blood Specimens from Patients with Early Lyme Disease during Treatment Reveals Changing Coinfection with Mixtures of Borrelia burgdorferi Genotypes.

Mosel MR, Carolan HE, Rebman AW, Castro S, Massire C, Ecker DJ, Soloski MJ, Aucott JN, Eshoo MW.

Antimicrob Agents Chemother. 2019 Jun 24;63(7). pii: e00237-19. doi: 10.1128/AAC.00237-19. Print 2019 Jul.


Method for Low Nanomolar Concentration Analyte Sensing Using Electrochemical Enzymatic Biosensors.

Oja SM, Feldman B, Eshoo MW.

Anal Chem. 2018 Feb 6;90(3):1536-1541. doi: 10.1021/acs.analchem.7b04075. Epub 2018 Jan 8.


Broad-range survey of vector-borne pathogens and tick host identification of Ixodes ricinus from Southern Czech Republic.

Honig V, Carolan HE, Vavruskova Z, Massire C, Mosel MR, Crowder CD, Rounds MA, Ecker DJ, Ruzek D, Grubhoffer L, Luft BJ, Eshoo MW.

FEMS Microbiol Ecol. 2017 Nov 1;93(11). doi: 10.1093/femsec/fix129.


Erratum for Stromdahl et al., Borrelia burgdorferi Not Confirmed in Human-Biting Amblyomma americanum Ticks from the Southeastern United States.

Stromdahl EY, Nadolny RM, Gibbons JA, Auckland LD, Vince MA, Elkins CE, Murphy MP, Hickling GJ, Eshoo MW, Carolan HE, Crowder CD, Pilgard MA, Hamer SA.

J Clin Microbiol. 2016 May;54(5):1406. doi: 10.1128/JCM.00527-16. No abstract available.


Survey of Ixodes pacificus Ticks in California Reveals a Diversity of Microorganisms and a Novel and Widespread Anaplasmataceae Species.

Eshoo MW, Carolan HE, Massire C, Chou DM, Crowder CD, Rounds MA, Phillipson CA, Schutzer SE, Ecker DJ.

PLoS One. 2015 Sep 16;10(9):e0135828. doi: 10.1371/journal.pone.0135828. eCollection 2015.


Borrelia burgdorferi not confirmed in human-biting Amblyomma americanum ticks from the southeastern United States.

Stromdahl EY, Nadolny RM, Gibbons JA, Auckland LD, Vince MA, Elkins CE, Murphy MP, Hickling GJ, Eshoo MW, Carolan HE, Crowder CD, Pilgard MA, Hamer SA.

J Clin Microbiol. 2015 May;53(5):1697-704. doi: 10.1128/JCM.03454-14. Epub 2015 Mar 18. Erratum in: J Clin Microbiol. 2016 May;54(5):1406.


Prevalence of Borrelia miyamotoi in Ixodes ticks in Europe and the United States.

Crowder CD, Carolan HE, Rounds MA, Honig V, Mothes B, Haag H, Nolte O, Luft BJ, Grubhoffer L, Ecker DJ, Schutzer SE, Eshoo MW.

Emerg Infect Dis. 2014 Oct;20(10):1678-82. doi: 10.3201/eid2010.131583.


Broad-range survey of tick-borne pathogens in Southern Germany reveals a high prevalence of Babesia microti and a diversity of other tick-borne pathogens.

Eshoo MW, Crowder CD, Carolan HE, Rounds MA, Ecker DJ, Haag H, Mothes B, Nolte O.

Vector Borne Zoonotic Dis. 2014 Aug;14(8):584-91. doi: 10.1089/vbz.2013.1498.


Improved multiple displacement amplification (iMDA) and ultraclean reagents.

Motley ST, Picuri JM, Crowder CD, Minich JJ, Hofstadler SA, Eshoo MW.

BMC Genomics. 2014 Jun 6;15:443. doi: 10.1186/1471-2164-15-443.


Xenodiagnosis to detect Borrelia burgdorferi infection: a first-in-human study.

Marques A, Telford SR 3rd, Turk SP, Chung E, Williams C, Dardick K, Krause PJ, Brandeburg C, Crowder CD, Carolan HE, Eshoo MW, Shaw PA, Hu LT.

Clin Infect Dis. 2014 Apr;58(7):937-45. doi: 10.1093/cid/cit939. Epub 2014 Feb 11.


Achieving molecular diagnostics for Lyme disease.

Eshoo MW, Schutzer SE, Crowder CD, Carolan HE, Ecker DJ.

Expert Rev Mol Diagn. 2013 Nov;13(8):875-83. doi: 10.1586/14737159.2013.850418. Review.


Enhanced diagnostic yields of bacteremia and candidemia in blood specimens by PCR-electrospray ionization mass spectrometry.

Laffler TG, Cummins LL, McClain CM, Quinn CD, Toro MA, Carolan HE, Toleno DM, Rounds MA, Eshoo MW, Stratton CW, Sampath R, Blyn LB, Ecker DJ, Tang YW.

J Clin Microbiol. 2013 Nov;51(11):3535-41. doi: 10.1128/JCM.00876-13. Epub 2013 Aug 21.


Molecular genotyping of Acinetobacter spp. isolated in Arizona, USA, using multilocus PCR and mass spectrometry.

Sarovich DS, Colman RE, Price EP, Massire C, Von Schulze AT, Waddell V, Anderson SM, Ecker DJ, Liguori AP, Engelthaler DM, Sampath R, Keim P, Eshoo MW, Wagner DM.

J Med Microbiol. 2013 Sep;62(Pt 9):1295-300. doi: 10.1099/jmm.0.052381-0. Epub 2013 Jun 5.


Atypical erythema migrans in patients with PCR-positive Lyme disease.

Schutzer SE, Berger BW, Krueger JG, Eshoo MW, Ecker DJ, Aucott JN.

Emerg Infect Dis. 2013 May;19(5):815-7. doi: 10.3201/eid1905.120796. No abstract available.


Differentiating microbial forensic qPCR target and control products by electrospray ionization mass spectrometry.

Motley ST, Redden CL, Sannes-Lowery KA, Eshoo MW, Hofstadler SA, Burans JP, Rosovitz MJ.

Biosecur Bioterror. 2013 Jun;11(2):107-17. doi: 10.1089/bsp.2012.0062. Epub 2013 May 15.


Detection of Plasmodium vivax in a child returning from India by use of broad-range PCR and electrospray ionization mass spectrometry.

Rounds MA, Crowder CD, Stratton CW, Ecker DJ, Eshoo MW, Tang YW.

Emerg Microbes Infect. 2012 Dec;1(12):e48. doi: 10.1038/emi.2012.49. Epub 2012 Dec 26.


Identification and typing of Francisella tularensis with a highly automated genotyping assay.

Duncan DD, Vogler AJ, Wolcott MJ, Li F, Sarovich DS, Birdsell DN, Watson LM, Hall TA, Sampath R, Housley R, Blyn LB, Hofstadler SA, Ecker DJ, Keim P, Wagner DM, Eshoo MW.

Lett Appl Microbiol. 2013 Feb;56(2):128-34. doi: 10.1111/lam.12022. Epub 2012 Nov 28.


Identification of endosymbionts in ticks by broad-range polymerase chain reaction and electrospray ionization mass spectrometry.

Rounds MA, Crowder CD, Matthews HE, Philipson CA, Scoles GA, Ecker DJ, Schutzer SE, Eshoo MW.

J Med Entomol. 2012 Jul;49(4):843-50.


Comprehensive biothreat cluster identification by PCR/electrospray-ionization mass spectrometry.

Sampath R, Mulholland N, Blyn LB, Massire C, Whitehouse CA, Waybright N, Harter C, Bogan J, Miranda MS, Smith D, Baldwin C, Wolcott M, Norwood D, Kreft R, Frinder M, Lovari R, Yasuda I, Matthews H, Toleno D, Housley R, Duncan D, Li F, Warren R, Eshoo MW, Hall TA, Hofstadler SA, Ecker DJ.

PLoS One. 2012;7(6):e36528. doi: 10.1371/journal.pone.0036528. Epub 2012 Jun 29.


Detection of heartworm infection in dogs via PCR amplification and electrospray ionization mass spectrometry of nucleic acid extracts from whole blood samples.

Crowder CD, Matthews HE, Rounds MA, Li F, Schutzer SE, Sampath R, Hofstadler SA, Ecker DJ, Eshoo MW.

Am J Vet Res. 2012 Jun;73(6):854-9. doi: 10.2460/ajvr.73.6.854. Erratum in: Am J Vet Res. 2012 Jul;73(7):1091. Sampath, Ranga [corrected to Sampath, Rangarajan].


Direct molecular detection and genotyping of Borrelia burgdorferi from whole blood of patients with early Lyme disease.

Eshoo MW, Crowder CC, Rebman AW, Rounds MA, Matthews HE, Picuri JM, Soloski MJ, Ecker DJ, Schutzer SE, Aucott JN.

PLoS One. 2012;7(5):e36825. doi: 10.1371/journal.pone.0036825. Epub 2012 May 8.


Longitudinal analysis of the temporal evolution of Acinetobacter baumannii strains in Ohio, USA, by using rapid automated typing methods.

Decker BK, Perez F, Hujer AM, Hujer KM, Hall GS, Jacobs MR, Gebreyes WA, Zoll ST, Massire C, Eshoo MW, Ecker DJ, Rather PN, Bonomo RA.

PLoS One. 2012;7(4):e33443. doi: 10.1371/journal.pone.0033443. Epub 2012 Apr 12.


Identification and characterization of Francisella species from natural warm springs in Utah, USA.

Whitehouse CA, Kesterson KE, Duncan DD, Eshoo MW, Wolcott M.

Lett Appl Microbiol. 2012 Apr;54(4):313-24. doi: 10.1111/j.1472-765X.2012.03214.x. Epub 2012 Feb 15.


Identification of a novel Acinetobacter baumannii clone in a US hospital outbreak by multilocus polymerase chain reaction/electrospray-ionization mass spectrometry.

Schuetz AN, Huard RC, Eshoo MW, Massire C, Della-Latta P, Wu F, Jenkins SG.

Diagn Microbiol Infect Dis. 2012 Jan;72(1):14-9. doi: 10.1016/j.diagmicrobio.2011.09.012. Epub 2011 Oct 19.


Analysis of cerebrospinal fluid from chronic fatigue syndrome patients for multiple human ubiquitous viruses and xenotropic murine leukemia-related virus.

Schutzer SE, Rounds MA, Natelson BH, Ecker DJ, Eshoo MW.

Ann Neurol. 2011 Apr;69(4):735-8. doi: 10.1002/ana.22389. Epub 2011 Apr 6.


Genotypic variation and mixtures of Lyme Borrelia in Ixodes ticks from North America and Europe.

Crowder CD, Matthews HE, Schutzer S, Rounds MA, Luft BJ, Nolte O, Campbell SR, Phillipson CA, Li F, Sampath R, Ecker DJ, Eshoo MW.

PLoS One. 2010 May 14;5(5):e10650. doi: 10.1371/journal.pone.0010650.


New technology for rapid molecular diagnosis of bloodstream infections.

Ecker DJ, Sampath R, Li H, Massire C, Matthews HE, Toleno D, Hall TA, Blyn LB, Eshoo MW, Ranken R, Hofstadler SA, Tang YW.

Expert Rev Mol Diagn. 2010 May;10(4):399-415. doi: 10.1586/erm.10.24.


Rapid identification of vector-borne flaviviruses by mass spectrometry.

Grant-Klein RJ, Baldwin CD, Turell MJ, Rossi CA, Li F, Lovari R, Crowder CD, Matthews HE, Rounds MA, Eshoo MW, Blyn LB, Ecker DJ, Sampath R, Whitehouse CA.

Mol Cell Probes. 2010 Aug;24(4):219-28. doi: 10.1016/j.mcp.2010.04.003. Epub 2010 Apr 20.


Extraction of total nucleic acids from ticks for the detection of bacterial and viral pathogens.

Crowder CD, Rounds MA, Phillipson CA, Picuri JM, Matthews HE, Halverson J, Schutzer SE, Ecker DJ, Eshoo MW.

J Med Entomol. 2010 Jan;47(1):89-94.


Application of the Ibis-T5000 pan-Orthopoxvirus assay to quantitatively detect monkeypox viral loads in clinical specimens from macaques experimentally infected with aerosolized monkeypox virus.

Grant RJ, Baldwin CD, Nalca A, Zoll S, Blyn LB, Eshoo MW, Matthews H, Sampath R, Whitehouse CA.

Am J Trop Med Hyg. 2010 Feb;82(2):318-23. doi: 10.4269/ajtmh.2010.09-0361.


Detection and identification of Ehrlichia species in blood by use of PCR and electrospray ionization mass spectrometry.

Eshoo MW, Crowder CD, Li H, Matthews HE, Meng S, Sefers SE, Sampath R, Stratton CW, Blyn LB, Ecker DJ, Tang YW.

J Clin Microbiol. 2010 Feb;48(2):472-8. doi: 10.1128/JCM.01669-09. Epub 2009 Dec 2.


Rapid and high-throughput pan-Orthopoxvirus detection and identification using PCR and mass spectrometry.

Eshoo MW, Whitehouse CA, Nalca A, Zoll S, Ecker JA, Hall TA, Pennella TT, Duncan DD, Desai A, Moradi EK, Rudnick K, Libby B, Ranken R, Sampath R, Hofstadler SA, Ecker DJ, Blyn LB.

PLoS One. 2009 Jul 22;4(7):e6342. doi: 10.1371/journal.pone.0006342.


Molecular genotyping of microbes by multilocus PCR and mass spectrometry: a new tool for hospital infection control and public health surveillance.

Ecker DJ, Massire C, Blyn LB, Hofstadler SA, Hannis JC, Eshoo MW, Hall TA, Sampath R.

Methods Mol Biol. 2009;551:71-87. doi: 10.1007/978-1-60327-999-4_7.


Rapid determination of quinolone resistance in Acinetobacter spp.

Hujer KM, Hujer AM, Endimiani A, Thomson JM, Adams MD, Goglin K, Rather PN, Pennella TT, Massire C, Eshoo MW, Sampath R, Blyn LB, Ecker DJ, Bonomo RA.

J Clin Microbiol. 2009 May;47(5):1436-42. doi: 10.1128/JCM.02380-08. Epub 2009 Mar 18.


Usefulness of multilocus polymerase chain reaction followed by electrospray ionization mass spectrometry to identify a diverse panel of bacterial isolates.

Baldwin CD, Howe GB, Sampath R, Blyn LB, Matthews H, Harpin V, Hall TA, Drader JJ, Hofstadler SA, Eshoo MW, Rudnick K, Studarus K, Moore D, Abbott S, Janda JM, Whitehouse CA.

Diagn Microbiol Infect Dis. 2009 Apr;63(4):403-8. doi: 10.1016/j.diagmicrobio.2008.12.012. Epub 2009 Feb 18.


Occupational transmission of Acinetobacter baumannii from a United States serviceman wounded in Iraq to a health care worker.

Whitman TJ, Qasba SS, Timpone JG, Babel BS, Kasper MR, English JF, Sanders JW, Hujer KM, Hujer AM, Endimiani A, Eshoo MW, Bonomo RA.

Clin Infect Dis. 2008 Aug 15;47(4):439-43. doi: 10.1086/589247.


Ibis T5000: a universal biosensor approach for microbiology.

Ecker DJ, Sampath R, Massire C, Blyn LB, Hall TA, Eshoo MW, Hofstadler SA.

Nat Rev Microbiol. 2008 Jul;6(7):553-8. doi: 10.1038/nrmicro1918. Epub 2008 Jun 3. Review.


Genotypic evolution of Acinetobacter baumannii strains in an outbreak associated with war trauma.

Wortmann G, Weintrob A, Barber M, Scott P, Zoll ST, Eshoo MW, Sampath R, Ecker DJ, Massire C.

Infect Control Hosp Epidemiol. 2008 Jun;29(6):553-5. doi: 10.1086/588221.


Direct broad-range detection of alphaviruses in mosquito extracts.

Eshoo MW, Whitehouse CA, Zoll ST, Massire C, Pennella TT, Blyn LB, Sampath R, Hall TA, Ecker JA, Desai A, Wasieloski LP, Li F, Turell MJ, Schink A, Rudnick K, Otero G, Weaver SC, Ludwig GV, Hofstadler SA, Ecker DJ.

Virology. 2007 Nov 25;368(2):286-95. Epub 2007 Jul 25.


Global surveillance of emerging Influenza virus genotypes by mass spectrometry.

Sampath R, Russell KL, Massire C, Eshoo MW, Harpin V, Blyn LB, Melton R, Ivy C, Pennella T, Li F, Levene H, Hall TA, Libby B, Fan N, Walcott DJ, Ranken R, Pear M, Schink A, Gutierrez J, Drader J, Moore D, Metzgar D, Addington L, Rothman R, Gaydos CA, Yang S, St George K, Fuschino ME, Dean AB, Stallknecht DE, Goekjian G, Yingst S, Monteville M, Saad MD, Whitehouse CA, Baldwin C, Rudnick KH, Hofstadler SA, Lemon SM, Ecker DJ.

PLoS One. 2007 May 30;2(5):e489.


Rapid identification of emerging infectious agents using PCR and electrospray ionization mass spectrometry.

Sampath R, Hall TA, Massire C, Li F, Blyn LB, Eshoo MW, Hofstadler SA, Ecker DJ.

Ann N Y Acad Sci. 2007 Apr;1102:109-20. Review.


Analysis of antibiotic resistance genes in multidrug-resistant Acinetobacter sp. isolates from military and civilian patients treated at the Walter Reed Army Medical Center.

Hujer KM, Hujer AM, Hulten EA, Bajaksouzian S, Adams JM, Donskey CJ, Ecker DJ, Massire C, Eshoo MW, Sampath R, Thomson JM, Rather PN, Craft DW, Fishbain JT, Ewell AJ, Jacobs MR, Paterson DL, Bonomo RA.

Antimicrob Agents Chemother. 2006 Dec;50(12):4114-23. Epub 2006 Sep 25.


Identification of Acinetobacter species and genotyping of Acinetobacter baumannii by multilocus PCR and mass spectrometry.

Ecker JA, Massire C, Hall TA, Ranken R, Pennella TT, Agasino Ivy C, Blyn LB, Hofstadler SA, Endy TP, Scott PT, Lindler L, Hamilton T, Gaddy C, Snow K, Pe M, Fishbain J, Craft D, Deye G, Riddell S, Milstrey E, Petruccelli B, Brisse S, Harpin V, Schink A, Ecker DJ, Sampath R, Eshoo MW.

J Clin Microbiol. 2006 Aug;44(8):2921-32.


Rapid identification and strain-typing of respiratory pathogens for epidemic surveillance.

Ecker DJ, Sampath R, Blyn LB, Eshoo MW, Ivy C, Ecker JA, Libby B, Samant V, Sannes-Lowery KA, Melton RE, Russell K, Freed N, Barrozo C, Wu J, Rudnick K, Desai A, Moradi E, Knize DJ, Robbins DW, Hannis JC, Harrell PM, Massire C, Hall TA, Jiang Y, Ranken R, Drader JJ, White N, McNeil JA, Crooke ST, Hofstadler SA.

Proc Natl Acad Sci U S A. 2005 May 31;102(22):8012-7. Epub 2005 May 23.


Rapid identification of emerging pathogens: coronavirus.

Sampath R, Hofstadler SA, Blyn LB, Eshoo MW, Hall TA, Massire C, Levene HM, Hannis JC, Harrell PM, Neuman B, Buchmeier MJ, Jiang Y, Ranken R, Drader JJ, Samant V, Griffey RH, McNeil JA, Crooke ST, Ecker DJ.

Emerg Infect Dis. 2005 Mar;11(3):373-9.


cDNA microarray analysis of changes in gene expression induced by neuronal hypoxia in vitro.

Jin K, Mao XO, Eshoo MW, del Rio G, Rao R, Chen D, Simon RP, Greenberg DA.

Neurochem Res. 2002 Oct;27(10):1105-12.


Microarray analysis of hippocampal gene expression in global cerebral ischemia.

Jin K, Mao XO, Eshoo MW, Nagayama T, Minami M, Simon RP, Greenberg DA.

Ann Neurol. 2001 Jul;50(1):93-103.


DNA sequence and analysis of the bet genes encoding the osmoregulatory choline-glycine betaine pathway of Escherichia coli.

Lamark T, Kaasen I, Eshoo MW, Falkenberg P, McDougall J, Strøm AR.

Mol Microbiol. 1991 May;5(5):1049-64.


Selection, mapping, and characterization of osmoregulatory mutants of Escherichia coli blocked in the choline-glycine betaine pathway.

Styrvold OB, Falkenberg P, Landfald B, Eshoo MW, Bjørnsen T, Strøm AR.

J Bacteriol. 1986 Mar;165(3):856-63.

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