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Items: 30

1.

A Screen for Gene Paralogies Delineating Evolutionary Branching Order of Early Metazoa.

Erives A, Fritzsch B.

G3 (Bethesda). 2019 Dec 26. pii: g3.400951.2019. doi: 10.1534/g3.119.400951. [Epub ahead of print]

2.

Episodic evolution of a eukaryotic NADK repertoire of ancient provenance.

Vickman O, Erives A.

PLoS One. 2019 Aug 1;14(8):e0220447. doi: 10.1371/journal.pone.0220447. eCollection 2019.

3.

Wilhelm His' lasting insights into hindbrain and cranial ganglia development and evolution.

Glover JC, Elliott KL, Erives A, Chizhikov VV, Fritzsch B.

Dev Biol. 2018 Dec 1;444 Suppl 1:S14-S24. doi: 10.1016/j.ydbio.2018.02.001. Epub 2018 Feb 12. Review.

4.
5.

Correction: Recessive coding and regulatory mutations in FBLIM1 underlie the pathogenesis of chronic recurrent multifocal osteomyelitis (CRMO).

Cox AJ, Darbro BW, Laxer RM, Velez G, Bing X, Finer AL, Erives A, Mahajan VB, Bassuk AG, Ferguson PJ.

PLoS One. 2017 Jul 7;12(7):e0181222. doi: 10.1371/journal.pone.0181222. eCollection 2017.

6.

Evolving Notch polyQ tracts reveal possible solenoid interference elements.

Erives AJ.

PLoS One. 2017 Mar 20;12(3):e0174253. doi: 10.1371/journal.pone.0174253. eCollection 2017.

7.

Recessive coding and regulatory mutations in FBLIM1 underlie the pathogenesis of chronic recurrent multifocal osteomyelitis (CRMO).

Cox AJ, Darbro BW, Laxer RM, Velez G, Bing X, Finer AL, Erives A, Mahajan VB, Bassuk AG, Ferguson PJ.

PLoS One. 2017 Mar 16;12(3):e0169687. doi: 10.1371/journal.pone.0169687. eCollection 2017. Erratum in: PLoS One. 2017 Jul 7;12 (7):e0181222.

8.

Integration of Orthogonal Signaling by the Notch and Dpp Pathways in Drosophila.

Stroebele E, Erives A.

Genetics. 2016 May;203(1):219-40. doi: 10.1534/genetics.116.186791. Epub 2016 Mar 14.

9.

The Nature, Extent, and Consequences of Genetic Variation in the opa Repeats of Notch in Drosophila.

Rice C, Beekman D, Liu L, Erives A.

G3 (Bethesda). 2015 Sep 10;5(11):2405-19. doi: 10.1534/g3.115.021659.

10.
11.

Metabolic and chaperone gene loss marks the origin of animals: evidence for Hsp104 and Hsp78 chaperones sharing mitochondrial enzymes as clients.

Erives AJ, Fassler JS.

PLoS One. 2015 Feb 24;10(2):e0117192. doi: 10.1371/journal.pone.0117192. eCollection 2015.

12.

Microsatellite repeat instability fuels evolution of embryonic enhancers in Hawaiian Drosophila.

Brittain A, Stroebele E, Erives A.

PLoS One. 2014 Jun 30;9(6):e101177. doi: 10.1371/journal.pone.0101177. eCollection 2014.

13.

New insights into the roles of Xin repeat-containing proteins in cardiac development, function, and disease.

Wang Q, Lin JL, Erives AJ, Lin CI, Lin JJ.

Int Rev Cell Mol Biol. 2014;310:89-128. doi: 10.1016/B978-0-12-800180-6.00003-7. Review.

14.

A Schnurri/Mad/Medea complex attenuates the dorsal-twist gradient readout at vnd.

Crocker J, Erives A.

Dev Biol. 2013 Jun 1;378(1):64-72. doi: 10.1016/j.ydbio.2013.03.002. Epub 2013 Mar 13.

15.

A model of proto-anti-codon RNA enzymes requiring L-amino acid homochirality.

Erives A.

J Mol Evol. 2011 Aug;73(1-2):10-22. doi: 10.1007/s00239-011-9453-4. Epub 2011 Jul 22.

16.

Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers.

Crocker J, Potter N, Erives A.

Nat Commun. 2010 Oct 19;1:99. doi: 10.1038/ncomms1102.

17.

Left-handed DNA can be right.

Erives A.

Nature. 2010 Oct 14;467(7317):789. doi: 10.1038/467789e. No abstract available.

PMID:
20944728
18.

Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis.

Kugler JE, Gazdoiu S, Oda-Ishii I, Passamaneck YJ, Erives AJ, Di Gregorio A.

J Cell Sci. 2010 Jul 15;123(Pt 14):2453-63. doi: 10.1242/jcs.066910.

19.

Non-homologous structured CRMs from the Ciona genome.

Erives A.

J Comput Biol. 2009 Feb;16(2):369-77. doi: 10.1089/cmb.2008.20TT.

PMID:
19193153
20.

A closer look at the eve stripe 2 enhancers of Drosophila and Themira.

Crocker J, Erives A.

PLoS Genet. 2008 Nov;4(11):e1000276. doi: 10.1371/journal.pgen.1000276. Epub 2008 Nov 28. No abstract available.

21.

Evolution acts on enhancer organization to fine-tune gradient threshold readouts.

Crocker J, Tamori Y, Erives A.

PLoS Biol. 2008 Nov 4;6(11):e263. doi: 10.1371/journal.pbio.0060263.

22.

Evolution of the holozoan ribosome biogenesis regulon.

Brown SJ, Cole MD, Erives AJ.

BMC Genomics. 2008 Sep 24;9:442. doi: 10.1186/1471-2164-9-442.

23.

A regulatory code for neurogenic gene expression in the Drosophila embryo.

Markstein M, Zinzen R, Markstein P, Yee KP, Erives A, Stathopoulos A, Levine M.

Development. 2004 May;131(10):2387-94.

24.

Coordinate enhancers share common organizational features in the Drosophila genome.

Erives A, Levine M.

Proc Natl Acad Sci U S A. 2004 Mar 16;101(11):3851-6. Epub 2004 Mar 16.

25.

Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo.

Stathopoulos A, Van Drenth M, Erives A, Markstein M, Levine M.

Cell. 2002 Nov 27;111(5):687-701.

26.

Characterization of a maternal T-Box gene in Ciona intestinalis.

Erives A, Levine M.

Dev Biol. 2000 Sep 1;225(1):169-78.

27.

Temporal expression patterns of 39 Brachyury-downstream genes associated with notochord formation in the Ciona intestinalis embryo.

Hotta K, Takahashi H, Erives A, Levine M, Satoh N.

Dev Growth Differ. 1999 Dec;41(6):657-64.

PMID:
10646795
28.

Brachyury downstream notochord differentiation in the ascidian embryo.

Takahashi H, Hotta K, Erives A, Di Gregorio A, Zeller RW, Levine M, Satoh N.

Genes Dev. 1999 Jun 15;13(12):1519-23.

29.
30.

Dorsoventral patterning of the vertebrate neural tube is conserved in a protochordate.

Corbo JC, Erives A, Di Gregorio A, Chang A, Levine M.

Development. 1997 Jun;124(12):2335-44.

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