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Items: 22

1.

Formation of Chromatin Subcompartments by Phase Separation.

Erdel F, Rippe K.

Biophys J. 2018 May 22;114(10):2262-2270. doi: 10.1016/j.bpj.2018.03.011. Epub 2018 Apr 6. Review.

PMID:
29628210
2.

Real-time observation of light-controlled transcription in living cells.

Rademacher A, Erdel F, Trojanowski J, Schumacher S, Rippe K.

J Cell Sci. 2017 Dec 15;130(24):4213-4224. doi: 10.1242/jcs.205534. Epub 2017 Nov 9.

3.

How Communication Between Nucleosomes Enables Spreading and Epigenetic Memory of Histone Modifications.

Erdel F.

Bioessays. 2017 Dec;39(12). doi: 10.1002/bies.201700053. Epub 2017 Oct 16. Review.

PMID:
29034500
4.

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

Hoffmeister H, Fuchs A, Erdel F, Pinz S, Gröbner-Ferreira R, Bruckmann A, Deutzmann R, Schwartz U, Maldonado R, Huber C, Dendorfer AS, Rippe K, Längst G.

Nucleic Acids Res. 2017 Oct 13;45(18):10534-10554. doi: 10.1093/nar/gkx711.

5.

Retrieving Chromatin Patterns from Deep Sequencing Data Using Correlation Functions.

Molitor J, Mallm JP, Rippe K, Erdel F.

Biophys J. 2017 Feb 7;112(3):473-490. doi: 10.1016/j.bpj.2017.01.001. Epub 2017 Jan 26.

6.

Telomere Recognition and Assembly Mechanism of Mammalian Shelterin.

Erdel F, Kratz K, Willcox S, Griffith JD, Greene EC, de Lange T.

Cell Rep. 2017 Jan 3;18(1):41-53. doi: 10.1016/j.celrep.2016.12.005.

7.

Generalized nucleation and looping model for epigenetic memory of histone modifications.

Erdel F, Greene EC.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):E4180-9. doi: 10.1073/pnas.1605862113. Epub 2016 Jul 5.

8.

The viscoelastic properties of chromatin and the nucleoplasm revealed by scale-dependent protein mobility.

Erdel F, Baum M, Rippe K.

J Phys Condens Matter. 2015 Feb 18;27(6):064115. doi: 10.1088/0953-8984/27/6/064115. Epub 2015 Jan 7.

PMID:
25563347
9.

Specificity, propagation, and memory of pericentric heterochromatin.

Müller-Ott K, Erdel F, Matveeva A, Mallm JP, Rademacher A, Hahn M, Bauer C, Zhang Q, Kaltofen S, Schotta G, Höfer T, Rippe K.

Mol Syst Biol. 2014 Aug 18;10:746. doi: 10.15252/msb.20145377.

10.

Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells.

Baum M, Erdel F, Wachsmuth M, Rippe K.

Nat Commun. 2014 Jul 24;5:4494. doi: 10.1038/ncomms5494.

11.

Establishing epigenetic domains via chromatin-bound histone modifiers.

Erdel F, Müller-Ott K, Rippe K.

Ann N Y Acad Sci. 2013 Dec;1305:29-43. doi: 10.1111/nyas.12262. Epub 2013 Sep 13. Review.

PMID:
24033539
12.

SIRT6 recruits SNF2H to DNA break sites, preventing genomic instability through chromatin remodeling.

Toiber D, Erdel F, Bouazoune K, Silberman DM, Zhong L, Mulligan P, Sebastian C, Cosentino C, Martinez-Pastor B, Giacosa S, D'Urso A, Näär AM, Kingston R, Rippe K, Mostoslavsky R.

Mol Cell. 2013 Aug 22;51(4):454-68. doi: 10.1016/j.molcel.2013.06.018. Epub 2013 Aug 1.

13.

Taking into account nucleosomes for predicting gene expression.

Teif VB, Erdel F, Beshnova DA, Vainshtein Y, Mallm JP, Rippe K.

Methods. 2013 Jul 15;62(1):26-38. doi: 10.1016/j.ymeth.2013.03.011. Epub 2013 Mar 21. Review.

PMID:
23523656
14.

Quantifying transient binding of ISWI chromatin remodelers in living cells by pixel-wise photobleaching profile evolution analysis.

Erdel F, Rippe K.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):E3221-30. doi: 10.1073/pnas.1209579109. Epub 2012 Nov 5.

15.

Chromatin remodelling in mammalian cells by ISWI-type complexes--where, when and why?

Erdel F, Rippe K.

FEBS J. 2011 Oct;278(19):3608-18. doi: 10.1111/j.1742-4658.2011.08282.x. Epub 2011 Sep 2. Review.

16.
17.

Targeting chromatin remodelers: signals and search mechanisms.

Erdel F, Krug J, Längst G, Rippe K.

Biochim Biophys Acta. 2011 Sep;1809(9):497-508. doi: 10.1016/j.bbagrm.2011.06.005. Epub 2011 Jun 16. Review.

PMID:
21704204
18.

Human ISWI chromatin-remodeling complexes sample nucleosomes via transient binding reactions and become immobilized at active sites.

Erdel F, Schubert T, Marth C, Längst G, Rippe K.

Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19873-8. doi: 10.1073/pnas.1003438107. Epub 2010 Oct 25.

19.

Dissecting chromatin interactions in living cells from protein mobility maps.

Erdel F, Müller-Ott K, Baum M, Wachsmuth M, Rippe K.

Chromosome Res. 2011 Jan;19(1):99-115. doi: 10.1007/s10577-010-9155-6. Erratum in: Chromosome Res. 2011 Feb;19(2):267-8.

PMID:
20848178
20.

Multiscale analysis of dynamics and interactions of heterochromatin protein 1 by fluorescence fluctuation microscopy.

Müller KP, Erdel F, Caudron-Herger M, Marth C, Fodor BD, Richter M, Scaranaro M, Beaudouin J, Wachsmuth M, Rippe K.

Biophys J. 2009 Dec 2;97(11):2876-85. doi: 10.1016/j.bpj.2009.08.057.

21.

Dual color localization microscopy of cellular nanostructures.

Gunkel M, Erdel F, Rippe K, Lemmer P, Kaufmann R, Hörmann C, Amberger R, Cremer C.

Biotechnol J. 2009 Jun;4(6):927-38. doi: 10.1002/biot.200900005.

PMID:
19548231
22.

Analysis of protein mobilities and interactions in living cells by multifocal fluorescence fluctuation microscopy.

Heuvelman G, Erdel F, Wachsmuth M, Rippe K.

Eur Biophys J. 2009 Jul;38(6):813-28. doi: 10.1007/s00249-009-0499-9. Epub 2009 Jun 19.

PMID:
19543723

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