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Items: 1 to 50 of 124

1.

Large-scale mapping of microbial diversity in artisanal Brazilian cheeses.

Kamimura BA, De Filippis F, Sant'Ana AS, Ercolini D.

Food Microbiol. 2019 Jun;80:40-49. doi: 10.1016/j.fm.2018.12.014. Epub 2018 Dec 26.

PMID:
30704595
2.

A volatilomics approach for off-line discrimination of minced beef and pork meat and their admixture using HS-SPME GC/MS in tandem with multivariate data analysis.

Pavlidis DE, Mallouchos A, Ercolini D, Panagou EZ, Nychas GE.

Meat Sci. 2019 Jan 21;151:43-53. doi: 10.1016/j.meatsci.2019.01.003. [Epub ahead of print]

PMID:
30685510
3.

Gut microbiota signatures in cystic fibrosis: Loss of host CFTR function drives the microbiota enterophenotype.

Vernocchi P, Del Chierico F, Russo A, Majo F, Rossitto M, Valerio M, Casadei L, La Storia A, De Filippis F, Rizzo C, Manetti C, Paci P, Ercolini D, Marini F, Fiscarelli EV, Dallapiccola B, Lucidi V, Miccheli A, Putignani L.

PLoS One. 2018 Dec 6;13(12):e0208171. doi: 10.1371/journal.pone.0208171. eCollection 2018.

4.

The intestinal microbiota of Hermetia illucens larvae is affected by diet and shows a diverse composition in the different midgut regions.

Bruno D, Bonelli M, De Filippis F, Di Lelio I, Tettamanti G, Casartelli M, Ercolini D, Caccia S.

Appl Environ Microbiol. 2018 Nov 30. pii: AEM.01864-18. doi: 10.1128/AEM.01864-18. [Epub ahead of print]

PMID:
30504212
5.

Strain-Level Diversity Analysis of Pseudomonas fragi after In Situ Pangenome Reconstruction Shows Distinctive Spoilage-Associated Metabolic Traits Clearly Selected by Different Storage Conditions.

De Filippis F, La Storia A, Villani F, Ercolini D.

Appl Environ Microbiol. 2018 Dec 13;85(1). pii: e02212-18. doi: 10.1128/AEM.02212-18. Print 2019 Jan 1.

PMID:
30366996
6.

Gut microbiota composition and butyrate production in children affected by non-IgE-mediated cow's milk allergy.

Berni Canani R, De Filippis F, Nocerino R, Paparo L, Di Scala C, Cosenza L, Della Gatta G, Calignano A, De Caro C, Laiola M, Gilbert JA, Ercolini D.

Sci Rep. 2018 Aug 21;8(1):12500. doi: 10.1038/s41598-018-30428-3.

7.

Profiling white wine seed vinegar bacterial diversity through viable counting, metagenomic sequencing and PCR-DGGE.

Milanović V, Osimani A, Garofalo C, De Filippis F, Ercolini D, Cardinali F, Taccari M, Aquilanti L, Clementi F.

Int J Food Microbiol. 2018 Dec 2;286:66-74. doi: 10.1016/j.ijfoodmicro.2018.07.022. Epub 2018 Jul 20.

PMID:
30048915
8.

Dietary Interventions to Modulate the Gut Microbiome-How Far Away Are We From Precision Medicine.

De Filippis F, Vitaglione P, Cuomo R, Berni Canani R, Ercolini D.

Inflamm Bowel Dis. 2018 Sep 15;24(10):2142-2154. doi: 10.1093/ibd/izy080.

PMID:
29668914
9.

Revealing the microbiota of marketed edible insects through PCR-DGGE, metagenomic sequencing and real-time PCR.

Osimani A, Milanović V, Garofalo C, Cardinali F, Roncolini A, Sabbatini R, De Filippis F, Ercolini D, Gabucci C, Petruzzelli A, Tonucci F, Clementi F, Aquilanti L.

Int J Food Microbiol. 2018 Jul 2;276:54-62. doi: 10.1016/j.ijfoodmicro.2018.04.013. Epub 2018 Apr 11.

PMID:
29665523
10.

Food Design To Feed the Human Gut Microbiota.

Ercolini D, Fogliano V.

J Agric Food Chem. 2018 Apr 18;66(15):3754-3758. doi: 10.1021/acs.jafc.8b00456. Epub 2018 Apr 5. Review.

11.

Structure of association networks in food bacterial communities.

Parente E, Zotta T, Faust K, De Filippis F, Ercolini D.

Food Microbiol. 2018 Aug;73:49-60. doi: 10.1016/j.fm.2017.12.010. Epub 2017 Dec 22.

PMID:
29526226
12.

Different temperatures select distinctive acetic acid bacteria species and promotes organic acids production during Kombucha tea fermentation.

De Filippis F, Troise AD, Vitaglione P, Ercolini D.

Food Microbiol. 2018 Aug;73:11-16. doi: 10.1016/j.fm.2018.01.008. Epub 2018 Jan 9.

PMID:
29526195
13.

Postprandial Gastrointestinal Function Differs after Acute Administration of Sourdough Compared with Brewer's Yeast Bakery Products in Healthy Adults.

Polese B, Nicolai E, Genovese D, Verlezza V, La Sala CN, Aiello M, Inglese M, Incoronato M, Sarnelli G, De Rosa T, Schiatti A, Mondelli F, Ercolini D, Cuomo R.

J Nutr. 2018 Feb 1;148(2):202-208. doi: 10.1093/jn/nxx049.

PMID:
29490103
14.

Impact of Lactobacillus curvatus 54M16 on microbiota composition and growth of Listeria monocytogenes in fermented sausages.

Giello M, La Storia A, De Filippis F, Ercolini D, Villani F.

Food Microbiol. 2018 Jun;72:1-15. doi: 10.1016/j.fm.2017.11.003. Epub 2017 Nov 8.

PMID:
29407386
15.

Recent Past, Present, and Future of the Food Microbiome.

De Filippis F, Parente E, Ercolini D.

Annu Rev Food Sci Technol. 2018 Mar 25;9:589-608. doi: 10.1146/annurev-food-030117-012312. Epub 2018 Jan 18.

PMID:
29350561
16.

A Metagenomic and in Silico Functional Prediction of Gut Microbiota Profiles May Concur in Discovering New Cystic Fibrosis Patient-Targeted Probiotics.

Vernocchi P, Del Chierico F, Quagliariello A, Ercolini D, Lucidi V, Putignani L.

Nutrients. 2017 Dec 9;9(12). pii: E1342. doi: 10.3390/nu9121342.

17.

Different Lactobacillus populations dominate in "Chorizo de León" manufacturing performed in different production plants.

Quijada NM, De Filippis F, Sanz JJ, García-Fernández MDC, Rodríguez-Lázaro D, Ercolini D, Hernández M.

Food Microbiol. 2018 Apr;70:94-102. doi: 10.1016/j.fm.2017.09.009. Epub 2017 Sep 14.

PMID:
29173645
18.

A comparison of bioinformatic approaches for 16S rRNA gene profiling of food bacterial microbiota.

De Filippis F, Parente E, Zotta T, Ercolini D.

Int J Food Microbiol. 2018 Jan 16;265:9-17. doi: 10.1016/j.ijfoodmicro.2017.10.028. Epub 2017 Oct 27.

PMID:
29107843
19.

Antibiotic-induced microbiota perturbation causes gut endocannabinoidome changes, hippocampal neuroglial reorganization and depression in mice.

Guida F, Turco F, Iannotta M, De Gregorio D, Palumbo I, Sarnelli G, Furiano A, Napolitano F, Boccella S, Luongo L, Mazzitelli M, Usiello A, De Filippis F, Iannotti FA, Piscitelli F, Ercolini D, de Novellis V, Di Marzo V, Cuomo R, Maione S.

Brain Behav Immun. 2018 Jan;67:230-245. doi: 10.1016/j.bbi.2017.09.001. Epub 2017 Sep 7.

PMID:
28890155
20.

Metabolic gene-targeted monitoring of non-starter lactic acid bacteria during cheese ripening.

Levante A, De Filippis F, La Storia A, Gatti M, Neviani E, Ercolini D, Lazzi C.

Int J Food Microbiol. 2017 Sep 18;257:276-284. doi: 10.1016/j.ijfoodmicro.2017.07.002. Epub 2017 Jul 6.

PMID:
28735145
21.

Specific Signatures of the Gut Microbiota and Increased Levels of Butyrate in Children Treated with Fermented Cow's Milk Containing Heat-Killed Lactobacillus paracasei CBA L74.

Berni Canani R, De Filippis F, Nocerino R, Laiola M, Paparo L, Calignano A, De Caro C, Coretti L, Chiariotti L, Gilbert JA, Ercolini D.

Appl Environ Microbiol. 2017 Sep 15;83(19). pii: e01206-17. doi: 10.1128/AEM.01206-17. Print 2017 Oct 1.

22.

Gut Microbiota as a Target for Preventive and Therapeutic Intervention against Food Allergy.

Aitoro R, Paparo L, Amoroso A, Di Costanzo M, Cosenza L, Granata V, Di Scala C, Nocerino R, Trinchese G, Montella M, Ercolini D, Berni Canani R.

Nutrients. 2017 Jun 28;9(7). pii: E672. doi: 10.3390/nu9070672. Review.

23.

Different Amplicon Targets for Sequencing-Based Studies of Fungal Diversity.

De Filippis F, Laiola M, Blaiotta G, Ercolini D.

Appl Environ Microbiol. 2017 Aug 17;83(17). pii: e00905-17. doi: 10.1128/AEM.00905-17. Print 2017 Sep 1.

24.

Microbial diversity in pitted sweet cherries (Prunus avium L.) as affected by High-Hydrostatic Pressure treatment.

Toledo Del Árbol J, Pérez Pulido R, La Storia A, Grande Burgos MJ, Lucas R, Ercolini D, Gálvez A.

Food Res Int. 2016 Nov;89(Pt 1):790-796. doi: 10.1016/j.foodres.2016.10.014. Epub 2016 Oct 12.

PMID:
28460980
25.

A Few Pseudomonas Oligotypes Dominate in the Meat and Dairy Processing Environment.

Stellato G, Utter DR, Voorhis A, De Angelis M, Eren AM, Ercolini D.

Front Microbiol. 2017 Mar 2;8:264. doi: 10.3389/fmicb.2017.00264. eCollection 2017.

26.

Exciting strain-level resolution studies of the food microbiome.

Ercolini D.

Microb Biotechnol. 2017 Jan;10(1):54-56. doi: 10.1111/1751-7915.12593. Epub 2017 Jan 3. No abstract available.

27.

Dynamics of bacterial communities during manufacture and ripening of traditional Caciocavallo of Castelfranco cheese in relation to cows' feeding.

Giello M, La Storia A, Masucci F, Di Francia A, Ercolini D, Villani F.

Food Microbiol. 2017 May;63:170-177. doi: 10.1016/j.fm.2016.11.016. Epub 2016 Nov 24.

PMID:
28040166
28.

Unusual sub-genus associations of faecal Prevotella and Bacteroides with specific dietary patterns.

De Filippis F, Pellegrini N, Laghi L, Gobbetti M, Ercolini D.

Microbiome. 2016 Oct 21;4(1):57.

29.

Metagenomics insights into food fermentations.

De Filippis F, Parente E, Ercolini D.

Microb Biotechnol. 2017 Jan;10(1):91-102. doi: 10.1111/1751-7915.12421. Epub 2016 Oct 6. Review.

30.

Midgut microbiota and host immunocompetence underlie Bacillus thuringiensis killing mechanism.

Caccia S, Di Lelio I, La Storia A, Marinelli A, Varricchio P, Franzetti E, Banyuls N, Tettamanti G, Casartelli M, Giordana B, Ferré J, Gigliotti S, Ercolini D, Pennacchio F.

Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):9486-91. doi: 10.1073/pnas.1521741113. Epub 2016 Aug 9.

31.

Polymorphism of the phosphoserine phosphatase gene in Streptococcus thermophilus and its potential use for typing and monitoring of population diversity.

Ricciardi A, De Filippis F, Zotta T, Facchiano A, Ercolini D, Parente E.

Int J Food Microbiol. 2016 Nov 7;236:138-47. doi: 10.1016/j.ijfoodmicro.2016.07.031. Epub 2016 Jul 27.

PMID:
27497152
32.

Salivary and fecal microbiota and metabolome of celiac children under gluten-free diet.

De Angelis M, Vannini L, Di Cagno R, Cavallo N, Minervini F, Francavilla R, Ercolini D, Gobbetti M.

Int J Food Microbiol. 2016 Dec 19;239:125-132. doi: 10.1016/j.ijfoodmicro.2016.07.025. Epub 2016 Jul 19. Review.

PMID:
27452636
33.

Overlap of Spoilage-Associated Microbiota between Meat and the Meat Processing Environment in Small-Scale and Large-Scale Retail Distributions.

Stellato G, La Storia A, De Filippis F, Borriello G, Villani F, Ercolini D.

Appl Environ Microbiol. 2016 Jun 13;82(13):4045-54. doi: 10.1128/AEM.00793-16. Print 2016 Jul 1.

34.

Microbiota of an Italian Grana-Like Cheese during Manufacture and Ripening, Unraveled by 16S rRNA-Based Approaches.

Alessandria V, Ferrocino I, De Filippis F, Fontana M, Rantsiou K, Ercolini D, Cocolin L.

Appl Environ Microbiol. 2016 Jun 13;82(13):3988-3995. doi: 10.1128/AEM.00999-16. Print 2016 Jul 1.

35.

Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate.

De Filippis F, Genovese A, Ferranti P, Gilbert JA, Ercolini D.

Sci Rep. 2016 Feb 25;6:21871. doi: 10.1038/srep21871.

36.

FoodMicrobionet: A database for the visualisation and exploration of food bacterial communities based on network analysis.

Parente E, Cocolin L, De Filippis F, Zotta T, Ferrocino I, O'Sullivan O, Neviani E, De Angelis M, Cotter PD, Ercolini D.

Int J Food Microbiol. 2016 Feb 16;219:28-37. doi: 10.1016/j.ijfoodmicro.2015.12.001. Epub 2015 Dec 9.

PMID:
26704067
37.

From an imbalance to a new imbalance: Italian-style gluten-free diet alters the salivary microbiota and metabolome of African celiac children.

Ercolini D, Francavilla R, Vannini L, De Filippis F, Capriati T, Di Cagno R, Iacono G, De Angelis M, Gobbetti M.

Sci Rep. 2015 Dec 18;5:18571. doi: 10.1038/srep18571.

38.

Impact of Nisin-Activated Packaging on Microbiota of Beef Burgers during Storage.

Ferrocino I, Greppi A, La Storia A, Rantsiou K, Ercolini D, Cocolin L.

Appl Environ Microbiol. 2015 Nov 6;82(2):549-59. doi: 10.1128/AEM.03093-15. Print 2016 Jan 15.

39.

High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome.

De Filippis F, Pellegrini N, Vannini L, Jeffery IB, La Storia A, Laghi L, Serrazanetti DI, Di Cagno R, Ferrocino I, Lazzi C, Turroni S, Cocolin L, Brigidi P, Neviani E, Gobbetti M, O'Toole PW, Ercolini D.

Gut. 2016 Nov;65(11):1812-1821. doi: 10.1136/gutjnl-2015-309957. Epub 2015 Sep 28.

PMID:
26416813
40.

The microbiota of high-moisture mozzarella cheese produced with different acidification methods.

Guidone A, Zotta T, Matera A, Ricciardi A, De Filippis F, Ercolini D, Parente E.

Int J Food Microbiol. 2016 Jan 4;216:9-17. doi: 10.1016/j.ijfoodmicro.2015.09.002. Epub 2015 Sep 9.

PMID:
26384211
41.

Changes in microbial diversity of brined green asparagus upon treatment with high hydrostatic pressure.

Toledo Del Árbol J, Pérez Pulido R, La Storia A, Grande Burgos MJ, Lucas R, Ercolini D, Gálvez A.

Int J Food Microbiol. 2016 Jan 4;216:1-8. doi: 10.1016/j.ijfoodmicro.2015.09.001. Epub 2015 Sep 9.

PMID:
26372734
42.

Coexistence of Lactic Acid Bacteria and Potential Spoilage Microbiota in a Dairy Processing Environment.

Stellato G, De Filippis F, La Storia A, Ercolini D.

Appl Environ Microbiol. 2015 Nov;81(22):7893-904. doi: 10.1128/AEM.02294-15. Epub 2015 Sep 4.

43.

Lactic acid bacteria and their controversial role in fresh meat spoilage.

Pothakos V, Devlieghere F, Villani F, Björkroth J, Ercolini D.

Meat Sci. 2015 Nov;109:66-74. doi: 10.1016/j.meatsci.2015.04.014. Epub 2015 Apr 28.

PMID:
25972087
44.

Bacteria and yeast microbiota in milk kefir grains from different Italian regions.

Garofalo C, Osimani A, Milanović V, Aquilanti L, De Filippis F, Stellato G, Di Mauro S, Turchetti B, Buzzini P, Ercolini D, Clementi F.

Food Microbiol. 2015 Aug;49:123-33. doi: 10.1016/j.fm.2015.01.017. Epub 2015 Feb 7.

PMID:
25846922
45.

Processing Environment and Ingredients Are Both Sources of Leuconostoc gelidum, Which Emerges as a Major Spoiler in Ready-To-Eat Meals.

Pothakos V, Stellato G, Ercolini D, Devlieghere F.

Appl Environ Microbiol. 2015 May 15;81(10):3529-41. doi: 10.1128/AEM.03941-14. Epub 2015 Mar 13.

46.

Organic cultivation of Triticum turgidum subsp. durum is reflected in the flour-sourdough fermentation-bread axis.

Rizzello CG, Cavoski I, Turk J, Ercolini D, Nionelli L, Pontonio E, De Angelis M, De Filippis F, Gobbetti M, Di Cagno R.

Appl Environ Microbiol. 2015 May 1;81(9):3192-204. doi: 10.1128/AEM.04161-14. Epub 2015 Feb 27.

47.

Monitoring of the microbiota of fermented sausages by culture independent rRNA-based approaches.

Greppi A, Ferrocino I, La Storia A, Rantsiou K, Ercolini D, Cocolin L.

Int J Food Microbiol. 2015 Nov 6;212:67-75. doi: 10.1016/j.ijfoodmicro.2015.01.016. Epub 2015 Jan 31.

48.

Whole-grain wheat consumption reduces inflammation in a randomized controlled trial on overweight and obese subjects with unhealthy dietary and lifestyle behaviors: role of polyphenols bound to cereal dietary fiber.

Vitaglione P, Mennella I, Ferracane R, Rivellese AA, Giacco R, Ercolini D, Gibbons SM, La Storia A, Gilbert JA, Jonnalagadda S, Thielecke F, Gallo MA, Scalfi L, Fogliano V.

Am J Clin Nutr. 2015 Feb;101(2):251-61. doi: 10.3945/ajcn.114.088120. Epub 2014 Dec 3.

PMID:
25646321
49.

Exploring the microbiota dynamics related to vegetable biomasses degradation and study of lignocellulose-degrading bacteria for industrial biotechnological application.

Ventorino V, Aliberti A, Faraco V, Robertiello A, Giacobbe S, Ercolini D, Amore A, Fagnano M, Pepe O.

Sci Rep. 2015 Feb 2;5:8161. doi: 10.1038/srep08161.

50.

Bacterial populations and the volatilome associated to meat spoilage.

Casaburi A, Piombino P, Nychas GJ, Villani F, Ercolini D.

Food Microbiol. 2015 Feb;45(Pt A):83-102. doi: 10.1016/j.fm.2014.02.002. Epub 2014 Feb 22. Review.

PMID:
25481065

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