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Items: 9

1.

MAGI: A Method for Metabolite Annotation and Gene Integration.

Erbilgin O, RĂ¼bel O, Louie KB, Trinh M, Raad M, Wildish T, Udwary D, Hoover C, Deutsch S, Northen TR, Bowen BP.

ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 Apr 4.

PMID:
30896917
2.

Dynamic substrate preferences predict metabolic properties of a simple microbial consortium.

Erbilgin O, Bowen BP, Kosina SM, Jenkins S, Lau RK, Northen TR.

BMC Bioinformatics. 2017 Jan 23;18(1):57. doi: 10.1186/s12859-017-1478-2.

3.

The Structural Basis of Coenzyme A Recycling in a Bacterial Organelle.

Erbilgin O, Sutter M, Kerfeld CA.

PLoS Biol. 2016 Mar 9;14(3):e1002399. doi: 10.1371/journal.pbio.1002399. eCollection 2016 Mar.

4.

Bacterial microcompartment assembly: The key role of encapsulation peptides.

Aussignargues C, Paasch BC, Gonzalez-Esquer R, Erbilgin O, Kerfeld CA.

Commun Integr Biol. 2015 Jun 23;8(3):e1039755. doi: 10.1080/19420889.2015.1039755. eCollection 2015 May-Jun.

5.

Bioinformatic characterization of glycyl radical enzyme-associated bacterial microcompartments.

Zarzycki J, Erbilgin O, Kerfeld CA.

Appl Environ Microbiol. 2015 Dec;81(24):8315-29. doi: 10.1128/AEM.02587-15. Epub 2015 Sep 25.

6.

Bacterial microcompartments and the modular construction of microbial metabolism.

Kerfeld CA, Erbilgin O.

Trends Microbiol. 2015 Jan;23(1):22-34. doi: 10.1016/j.tim.2014.10.003. Epub 2014 Nov 14. Review.

PMID:
25455419
7.

A taxonomy of bacterial microcompartment loci constructed by a novel scoring method.

Axen SD, Erbilgin O, Kerfeld CA.

PLoS Comput Biol. 2014 Oct 23;10(10):e1003898. doi: 10.1371/journal.pcbi.1003898. eCollection 2014 Oct.

8.

Characterization of a planctomycetal organelle: a novel bacterial microcompartment for the aerobic degradation of plant saccharides.

Erbilgin O, McDonald KL, Kerfeld CA.

Appl Environ Microbiol. 2014 Apr;80(7):2193-205. doi: 10.1128/AEM.03887-13. Epub 2014 Jan 31.

9.

Glyoxylate metabolism is a key feature of the metabolic degradation of 1,4-dioxane by Pseudonocardia dioxanivorans strain CB1190.

Grostern A, Sales CM, Zhuang WQ, Erbilgin O, Alvarez-Cohen L.

Appl Environ Microbiol. 2012 May;78(9):3298-308. doi: 10.1128/AEM.00067-12. Epub 2012 Feb 10.

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