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Items: 1 to 50 of 80

1.

The biochemistry of headgroup exchange during triacylglycerol synthesis in canola.

Bai S, Wallis JG, Denolf P, Engelen S, Bengtsson JD, Van Thournout M, Dierickx J, Haesendonckx B, Browse J.

Plant J. 2020 Jan 28. doi: 10.1111/tpj.14709. [Epub ahead of print]

PMID:
31991038
2.

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome.

Salazar G, Paoli L, Alberti A, Huerta-Cepas J, Ruscheweyh HJ, Cuenca M, Field CM, Coelho LP, Cruaud C, Engelen S, Gregory AC, Labadie K, Marec C, Pelletier E, Royo-Llonch M, Roux S, Sánchez P, Uehara H, Zayed AA, Zeller G, Carmichael M, Dimier C, Ferland J, Kandels S, Picheral M, Pisarev S, Poulain J; Tara Oceans Coordinators, Acinas SG, Babin M, Bork P, Bowler C, de Vargas C, Guidi L, Hingamp P, Iudicone D, Karp-Boss L, Karsenti E, Ogata H, Pesant S, Speich S, Sullivan MB, Wincker P, Sunagawa S.

Cell. 2019 Nov 14;179(5):1068-1083.e21. doi: 10.1016/j.cell.2019.10.014.

3.

Validity and reliability of the Colorado Adult Joint Assessment Scale in adults with moderate-severe hemophilia A.

Funk SM, Engelen S, Benjamin K, Moshkovich O, Gentile B, Church N, Hong W, Thornhill D, Manco-Johnson MJ.

J Thromb Haemost. 2020 Feb;18(2):285-294. doi: 10.1111/jth.14651. Epub 2019 Nov 13.

PMID:
31557391
4.

Transposition favors the generation of large effect mutations that may facilitate rapid adaption.

Quadrana L, Etcheverry M, Gilly A, Caillieux E, Madoui MA, Guy J, Bortolini Silveira A, Engelen S, Baillet V, Wincker P, Aury JM, Colot V.

Nat Commun. 2019 Jul 31;10(1):3421. doi: 10.1038/s41467-019-11385-5.

5.

An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity.

Benjelloun B, Boyer F, Streeter I, Zamani W, Engelen S, Alberti A, Alberto FJ, BenBati M, Ibnelbachyr M, Chentouf M, Bechchari A, Rezaei HR, Naderi S, Stella A, Chikhi A, Clarke L, Kijas J, Flicek P, Taberlet P, Pompanon F.

Mol Ecol Resour. 2019 Nov;19(6):1497-1515. doi: 10.1111/1755-0998.13070. Epub 2019 Sep 9.

PMID:
31359622
6.

Risk of Positive Sentinel Lymph Node After Neoadjuvant Systemic Therapy in Clinically Node-Negative Breast Cancer: Implications for Postmastectomy Radiation Therapy and Immediate Breast Reconstruction.

Samiei S, van Kaathoven BN, Boersma L, Granzier RWY, Siesling S, Engelen SME, de Munck L, van Kuijk SMJ, van der Hulst RRJW, Lobbes MBI, Smidt ML, van Nijnatten TJA.

Ann Surg Oncol. 2019 Nov;26(12):3902-3909. doi: 10.1245/s10434-019-07643-x. Epub 2019 Jul 29.

7.

Feasibility of indocyanine green fluorescence imaging for intraoperative identification of parathyroid glands during thyroid surgery.

van den Bos J, van Kooten L, Engelen SME, Lubbers T, Stassen LPS, Bouvy ND.

Head Neck. 2019 Feb;41(2):340-348. doi: 10.1002/hed.25451. Epub 2018 Dec 11.

8.

Identification, characterization and field testing of Brassica napus mutants producing high-oleic oils.

Bai S, Engelen S, Denolf P, Wallis JG, Lynch K, Bengtsson JD, Van Thournout M, Haesendonckx B, Browse J.

Plant J. 2019 Apr;98(1):33-41. doi: 10.1111/tpj.14195. Epub 2019 Jan 28.

PMID:
30536486
9.

Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps.

Belser C, Istace B, Denis E, Dubarry M, Baurens FC, Falentin C, Genete M, Berrabah W, Chèvre AM, Delourme R, Deniot G, Denoeud F, Duffé P, Engelen S, Lemainque A, Manzanares-Dauleux M, Martin G, Morice J, Noel B, Vekemans X, D'Hont A, Rousseau-Gueutin M, Barbe V, Cruaud C, Wincker P, Aury JM.

Nat Plants. 2018 Nov;4(11):879-887. doi: 10.1038/s41477-018-0289-4. Epub 2018 Nov 2.

PMID:
30390080
10.

Letter to the Editor: A response to.

Bovenhuis H, van Engelen S, Visker MHPW.

J Dairy Sci. 2018 Nov;101(11):9621-9622. doi: 10.3168/jds.2018-15606. No abstract available.

11.

The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes.

Cubry P, Tranchant-Dubreuil C, Thuillet AC, Monat C, Ndjiondjop MN, Labadie K, Cruaud C, Engelen S, Scarcelli N, Rhoné B, Burgarella C, Dupuy C, Larmande P, Wincker P, François O, Sabot F, Vigouroux Y.

Curr Biol. 2018 Jul 23;28(14):2274-2282.e6. doi: 10.1016/j.cub.2018.05.066. Epub 2018 Jul 5.

12.

Genome evolution across 1,011 Saccharomyces cerevisiae isolates.

Peter J, De Chiara M, Friedrich A, Yue JX, Pflieger D, Bergström A, Sigwalt A, Barre B, Freel K, Llored A, Cruaud C, Labadie K, Aury JM, Istace B, Lebrigand K, Barbry P, Engelen S, Lemainque A, Wincker P, Liti G, Schacherer J.

Nature. 2018 Apr;556(7701):339-344. doi: 10.1038/s41586-018-0030-5. Epub 2018 Apr 11.

13.

Convergent genomic signatures of domestication in sheep and goats.

Alberto FJ, Boyer F, Orozco-terWengel P, Streeter I, Servin B, de Villemereuil P, Benjelloun B, Librado P, Biscarini F, Colli L, Barbato M, Zamani W, Alberti A, Engelen S, Stella A, Joost S, Ajmone-Marsan P, Negrini R, Orlando L, Rezaei HR, Naderi S, Clarke L, Flicek P, Wincker P, Coissac E, Kijas J, Tosser-Klopp G, Chikhi A, Bruford MW, Taberlet P, Pompanon F.

Nat Commun. 2018 Mar 6;9(1):813. doi: 10.1038/s41467-018-03206-y.

14.

A global ocean atlas of eukaryotic genes.

Carradec Q, Pelletier E, Da Silva C, Alberti A, Seeleuthner Y, Blanc-Mathieu R, Lima-Mendez G, Rocha F, Tirichine L, Labadie K, Kirilovsky A, Bertrand A, Engelen S, Madoui MA, Méheust R, Poulain J, Romac S, Richter DJ, Yoshikawa G, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Jaillon O, Aury JM, Karsenti E, Sullivan MB, Sunagawa S, Bork P, Not F, Hingamp P, Raes J, Guidi L, Ogata H, de Vargas C, Iudicone D, Bowler C, Wincker P.

Nat Commun. 2018 Jan 25;9(1):373. doi: 10.1038/s41467-017-02342-1.

15.

Genetic background of methane emission by Dutch Holstein Friesian cows measured with infrared sensors in automatic milking systems.

van Engelen S, Bovenhuis H, van der Tol PPJ, Visker MHPW.

J Dairy Sci. 2018 Mar;101(3):2226-2234. doi: 10.3168/jds.2017-13441. Epub 2018 Jan 10.

16.

Are PROMs sufficient to record late outcome of breast cancer patients treated with radiotherapy? A comparison between patient and clinician reported outcome through an outpatient clinic after 10years of follow up.

Brouwers PJAM, van Loon J, Houben RMA, Paulissen J, Engelen SME, Heuts M, de Boer M, Verhoeven K, De Ruysscher D, Boersma LJ.

Radiother Oncol. 2018 Jan;126(1):163-169. doi: 10.1016/j.radonc.2017.08.004. Epub 2017 Aug 24.

PMID:
28844787
17.

Effect of late prophylaxis in hemophilia on joint status: a randomized trial.

Manco-Johnson MJ, Lundin B, Funk S, Peterfy C, Raunig D, Werk M, Kempton CL, Reding MT, Goranov S, Gercheva L, Rusen L, Uscatescu V, Pierdominici M, Engelen S, Pocoski J, Walker D, Hong W.

J Thromb Haemost. 2017 Nov;15(11):2115-2124. doi: 10.1111/jth.13811. Epub 2017 Oct 10.

18.

Incidence of cardiovascular events and vascular interventions in patients with type 2 diabetes.

Engelen SE, van der Graaf Y, Stam-Slob MC, Grobbee DE, Cramer MJ, Kappelle LJ, de Borst GJ, Visseren FLJ, Westerink J; SMART study group.

Int J Cardiol. 2017 Dec 1;248:301-307. doi: 10.1016/j.ijcard.2017.07.081. Epub 2017 Jul 23.

PMID:
28802735
19.

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition.

Alberti A, Poulain J, Engelen S, Labadie K, Romac S, Ferrera I, Albini G, Aury JM, Belser C, Bertrand A, Cruaud C, Da Silva C, Dossat C, Gavory F, Gas S, Guy J, Haquelle M, Jacoby E, Jaillon O, Lemainque A, Pelletier E, Samson G, Wessner M; Genoscope Technical Team, Acinas SG, Royo-Llonch M, Cornejo-Castillo FM, Logares R, Fernández-Gómez B, Bowler C, Cochrane G, Amid C, Hoopen PT, De Vargas C, Grimsley N, Desgranges E, Kandels-Lewis S, Ogata H, Poulton N, Sieracki ME, Stepanauskas R, Sullivan MB, Brum JR, Duhaime MB, Poulos BT, Hurwitz BL; Tara Oceans Consortium Coordinators, Pesant S, Karsenti E, Wincker P.

Sci Data. 2017 Aug 1;4:170093. doi: 10.1038/sdata.2017.93.

20.

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.

Istace B, Friedrich A, d'Agata L, Faye S, Payen E, Beluche O, Caradec C, Davidas S, Cruaud C, Liti G, Lemainque A, Engelen S, Wincker P, Schacherer J, Aury JM.

Gigascience. 2017 Feb 1;6(2):1-13. doi: 10.1093/gigascience/giw018.

21.

Reduction of antinutritional glucosinolates in Brassica oilseeds by mutation of genes encoding transporters.

Nour-Eldin HH, Madsen SR, Engelen S, Jørgensen ME, Olsen CE, Andersen JS, Seynnaeve D, Verhoye T, Fulawka R, Denolf P, Halkier BA.

Nat Biotechnol. 2017 Apr;35(4):377-382. doi: 10.1038/nbt.3823. Epub 2017 Mar 13.

PMID:
28288105
22.

Short and Sweet: The Persuasive Effects of Message Framing and Temporal Context in Antismoking Warning Labels.

Mollen S, Engelen S, Kessels LT, van den Putte B.

J Health Commun. 2017 Jan;22(1):20-28. doi: 10.1080/10810730.2016.1247484. Epub 2016 Dec 20.

PMID:
27997285
23.

A double-blind randomized controlled trial comparing dexamethasone and clonidine as adjuvants to a ropivacaine sciatic popliteal block for foot surgery.

Vermeylen K, De Puydt J, Engelen S, Roofthooft E, Soetens F, Neyrinck A, Van de Velde M.

Local Reg Anesth. 2016 May 5;9:17-24. doi: 10.2147/LRA.S96073. eCollection 2016.

24.

Remifentanil PCIA during labor and delivery: can we improve maternal monitoring?.

Engelen S, Derks J, Beenakkers I.

Acta Anaesthesiol Belg. 2016;67(4):151-155.

PMID:
29873985
25.

Short communication: Genetic study of methane production predicted from milk fat composition in dairy cows.

van Engelen S, Bovenhuis H, Dijkstra J, van Arendonk JA, Visker MH.

J Dairy Sci. 2015 Nov;98(11):8223-6. doi: 10.3168/jds.2014-8989. Epub 2015 Sep 9.

26.

Type 1 diacylglycerol acyltransferases of Brassica napus preferentially incorporate oleic acid into triacylglycerol.

Aznar-Moreno J, Denolf P, Van Audenhove K, De Bodt S, Engelen S, Fahy D, Wallis JG, Browse J.

J Exp Bot. 2015 Oct;66(20):6497-506. doi: 10.1093/jxb/erv363. Epub 2015 Jul 20.

27.

Hind- and Midfoot Motion After Ankle Arthrodesis.

van der Plaat LW, van Engelen SJ, Wajer QE, Hendrickx RP, Doets KH, Houdijk H, van Dijk CN.

Foot Ankle Int. 2015 Dec;36(12):1430-7. doi: 10.1177/1071100715593913. Epub 2015 Jul 9.

PMID:
26160385
28.

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean.

de Vargas C, Audic S, Henry N, Decelle J, Mahé F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horák A, Jaillon O, Lima-Mendez G, Lukeš J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans Coordinators, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E.

Science. 2015 May 22;348(6237):1261605. doi: 10.1126/science.1261605.

29.

Ocean plankton. Structure and function of the global ocean microbiome.

Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, d'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans coordinators, Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P.

Science. 2015 May 22;348(6237):1261359. doi: 10.1126/science.1261359.

30.

Genome assembly using Nanopore-guided long and error-free DNA reads.

Madoui MA, Engelen S, Cruaud C, Belser C, Bertrand L, Alberti A, Lemainque A, Wincker P, Aury JM.

BMC Genomics. 2015 Apr 20;16:327. doi: 10.1186/s12864-015-1519-z.

31.

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data.

Benjelloun B, Alberto FJ, Streeter I, Boyer F, Coissac E, Stucki S, BenBati M, Ibnelbachyr M, Chentouf M, Bechchari A, Leempoel K, Alberti A, Engelen S, Chikhi A, Clarke L, Flicek P, Joost S, Taberlet P, Pompanon F; NextGen Consortium.

Front Genet. 2015 Apr 7;6:107. doi: 10.3389/fgene.2015.00107. eCollection 2015.

32.

TE-Tracker: systematic identification of transposition events through whole-genome resequencing.

Gilly A, Etcheverry M, Madoui MA, Guy J, Quadrana L, Alberti A, Martin A, Heitkam T, Engelen S, Labadie K, Le Pen J, Wincker P, Colot V, Aury JM.

BMC Bioinformatics. 2014 Nov 19;15:377. doi: 10.1186/s12859-014-0377-z.

33.

Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data.

Alberti A, Belser C, Engelen S, Bertrand L, Orvain C, Brinas L, Cruaud C, Giraut L, Da Silva C, Firmo C, Aury JM, Wincker P.

BMC Genomics. 2014 Oct 20;15:912. doi: 10.1186/1471-2164-15-912.

34.

Single level lumbar laminectomy alters segmental biomechanical behavior without affecting adjacent segments.

Bisschop A, van Engelen SJ, Kingma I, Holewijn RM, Stadhouder A, van der Veen AJ, van Dieën JH, van Royen BJ.

Clin Biomech (Bristol, Avon). 2014 Sep;29(8):912-7. doi: 10.1016/j.clinbiomech.2014.06.016. Epub 2014 Jul 3.

PMID:
25028214
35.

The effect of neighboring segments on the measurement of segmental stiffness in the intact lumbar spine.

van Engelen SJ, Bisschop A, Smit TH, van Royen BJ, van Dieën JH.

Spine J. 2015 Jun 1;15(6):1302-9. doi: 10.1016/j.spinee.2013.08.020. Epub 2013 Nov 9.

36.

Modern multidisciplinary treatment of rectal cancer based on staging with magnetic resonance imaging leads to excellent local control, but distant control remains a challenge.

Engelen SM, Maas M, Lahaye MJ, Leijtens JW, van Berlo CL, Jansen RL, Breukink SO, Dejong CH, van de Velde CJ, Beets-Tan RG, Beets GL.

Eur J Cancer. 2013 Jul;49(10):2311-20. doi: 10.1016/j.ejca.2013.03.006. Epub 2013 Apr 6.

37.

MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data.

Vallenet D, Belda E, Calteau A, Cruveiller S, Engelen S, Lajus A, Le Fèvre F, Longin C, Mornico D, Roche D, Rouy Z, Salvignol G, Scarpelli C, Thil Smith AA, Weiman M, Médigue C.

Nucleic Acids Res. 2013 Jan;41(Database issue):D636-47. doi: 10.1093/nar/gks1194. Epub 2012 Nov 27.

38.

Supraclavicular brachial plexus blocks: review and current practice.

Vermeylen K, Engelen S, Sermeus L, Soetens F, Van de Velde M.

Acta Anaesthesiol Belg. 2012;63(1):15-21. Review.

PMID:
22783706
39.

Validation of vibration testing for the assessment of the mechanical properties of human lumbar motion segments.

van Engelen SJ, Ellenbroek MH, van Royen BJ, de Boer A, van Dieën JH.

J Biomech. 2012 Jun 26;45(10):1753-8. doi: 10.1016/j.jbiomech.2012.05.009. Epub 2012 May 28.

40.

Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC.

Engelen S, Vallenet D, Médigue C, Danchin A.

BMC Genomics. 2012 Feb 14;13:69. doi: 10.1186/1471-2164-13-69.

41.

Wait-and-see policy for clinical complete responders after chemoradiation for rectal cancer.

Maas M, Beets-Tan RG, Lambregts DM, Lammering G, Nelemans PJ, Engelen SM, van Dam RM, Jansen RL, Sosef M, Leijtens JW, Hulsewé KW, Buijsen J, Beets GL.

J Clin Oncol. 2011 Dec 10;29(35):4633-40. doi: 10.1200/JCO.2011.37.7176. Epub 2011 Nov 7.

PMID:
22067400
42.

Detecting outlying samples in a parallel factor analysis model.

Engelen S, Hubert M.

Anal Chim Acta. 2011 Oct 31;705(1-2):155-65. doi: 10.1016/j.aca.2011.04.043. Epub 2011 Jun 16.

PMID:
21962358
43.

A novel isoform of sucrose synthase is targeted to the cell wall during secondary cell wall synthesis in cotton fiber.

Brill E, van Thournout M, White RG, Llewellyn D, Campbell PM, Engelen S, Ruan YL, Arioli T, Furbank RT.

Plant Physiol. 2011 Sep;157(1):40-54. doi: 10.1104/pp.111.178574. Epub 2011 Jul 14.

44.

The feasibility of modal testing for measurement of the dynamic characteristics of goat vertebral motion segments.

van Engelen SJ, van der Veen AJ, de Boer A, Ellenbroek MH, Smit TH, van Royen BJ, van Dieën JH.

J Biomech. 2011 May 17;44(8):1478-83. doi: 10.1016/j.jbiomech.2011.03.013. Epub 2011 Mar 29.

45.

Antiplatelet therapy in the perioperative period.

Engelen S, Sinnaeve P, Van Damme H, Verhamme P.

Acta Anaesthesiol Belg. 2010;61(3):139-43. Review.

PMID:
21268568
46.

An evaluation of underbody forced-air and resistive heating during hypothermic, on-pump cardiac surgery.

Engelen S, Himpe D, Borms S, Berghmans J, Van Cauwelaert P, Dalton JE, Sessler DI.

Anaesthesia. 2011 Feb;66(2):104-10. doi: 10.1111/j.1365-2044.2010.06609.x.

47.

Accuracy of gadofosveset-enhanced MRI for nodal staging and restaging in rectal cancer.

Lambregts DM, Beets GL, Maas M, Kessels AG, Bakers FC, Cappendijk VC, Engelen SM, Lahaye MJ, de Bruïne AP, Lammering G, Leiner T, Verwoerd JL, Wildberger JE, Beets-Tan RG.

Ann Surg. 2011 Mar;253(3):539-45. doi: 10.1097/SLA.0b013e31820b01f1.

PMID:
21239980
48.

Metabolic cost and mechanical work during walking after tibiotalar arthrodesis and the influence of footwear.

van Engelen SJ, Wajer QE, van der Plaat LW, Doets HC, van Dijk CN, Houdijk H.

Clin Biomech (Bristol, Avon). 2010 Oct;25(8):809-15. doi: 10.1016/j.clinbiomech.2010.05.008. Epub 2010 Jun 22.

PMID:
20573430
49.

MRI after chemoradiotherapy of rectal cancer: a useful tool to select patients for local excision.

Engelen SM, Beets-Tan RG, Lahaye MJ, Lammering G, Jansen RL, van Dam RM, Konsten J, Leijtens JW, van de Velde CJ, Beets GL.

Dis Colon Rectum. 2010 Jul;53(7):979-86. doi: 10.1007/DCR.0b013e3181dc64dc.

PMID:
20551748
50.

MicroScope: a platform for microbial genome annotation and comparative genomics.

Vallenet D, Engelen S, Mornico D, Cruveiller S, Fleury L, Lajus A, Rouy Z, Roche D, Salvignol G, Scarpelli C, Médigue C.

Database (Oxford). 2009;2009:bap021. Epub 2009 Nov 25.

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