Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 53

1.

Glycine receptor α4 subunit facilitates the early embryonic development in mice.

Nishizono H, Darwish M, Endo TA, Uno K, Abe H, Yasuda R.

Reproduction. 2019 Nov 1. pii: REP-19-0312.R1. doi: 10.1530/REP-19-0312. [Epub ahead of print]

PMID:
31689234
2.

Variant PRC1 competes with retinoic acid-related signals to repress Meis2 in the mouse distal forelimb bud.

Yakushiji-Kaminatsui N, Kondo T, Hironaka KI, Sharif J, Endo TA, Nakayama M, Masui O, Koseki Y, Kondo K, Ohara O, Vidal M, Morishita Y, Koseki H.

Development. 2018 Oct 11;145(19). pii: dev166348. doi: 10.1242/dev.166348.

3.

MUTE Directly Orchestrates Cell-State Switch and the Single Symmetric Division to Create Stomata.

Han SK, Qi X, Sugihara K, Dang JH, Endo TA, Miller KL, Kim ED, Miura T, Torii KU.

Dev Cell. 2018 May 7;45(3):303-315.e5. doi: 10.1016/j.devcel.2018.04.010.

4.

Three-step transcriptional priming that drives the commitment of multipotent progenitors toward B cells.

Miyai T, Takano J, Endo TA, Kawakami E, Agata Y, Motomura Y, Kubo M, Kashima Y, Suzuki Y, Kawamoto H, Ikawa T.

Genes Dev. 2018 Jan 15;32(2):112-126. doi: 10.1101/gad.309575.117. Epub 2018 Feb 9.

5.

Chemical hijacking of auxin signaling with an engineered auxin-TIR1 pair.

Uchida N, Takahashi K, Iwasaki R, Yamada R, Yoshimura M, Endo TA, Kimura S, Zhang H, Nomoto M, Tada Y, Kinoshita T, Itami K, Hagihara S, Torii KU.

Nat Chem Biol. 2018 Mar;14(3):299-305. doi: 10.1038/nchembio.2555. Epub 2018 Jan 22.

6.

Cbfβ2 controls differentiation of and confers homing capacity to prethymic progenitors.

Tenno M, Kojo S, Lawir DF, Hess I, Shiroguchi K, Ebihara T, Endo TA, Muroi S, Satoh R, Kawamoto H, Boehm T, Taniuchi I.

J Exp Med. 2018 Feb 5;215(2):595-610. doi: 10.1084/jem.20171221. Epub 2018 Jan 17.

7.

Priming of lineage-specifying genes by Bcl11b is required for lineage choice in post-selection thymocytes.

Kojo S, Tanaka H, Endo TA, Muroi S, Liu Y, Seo W, Tenno M, Kakugawa K, Naoe Y, Nair K, Moro K, Katsuragi Y, Kanai A, Inaba T, Egawa T, Venkatesh B, Minoda A, Kominami R, Taniuchi I.

Nat Commun. 2017 Sep 26;8(1):702. doi: 10.1038/s41467-017-00768-1.

8.

Analyses of a Mutant Foxp3 Allele Reveal BATF as a Critical Transcription Factor in the Differentiation and Accumulation of Tissue Regulatory T Cells.

Hayatsu N, Miyao T, Tachibana M, Murakami R, Kimura A, Kato T, Kawakami E, Endo TA, Setoguchi R, Watarai H, Nishikawa T, Yasuda T, Yoshida H, Hori S.

Immunity. 2017 Aug 15;47(2):268-283.e9. doi: 10.1016/j.immuni.2017.07.008. Epub 2017 Aug 1.

9.

EPC1/TIP60-Mediated Histone Acetylation Facilitates Spermiogenesis in Mice.

Dong Y, Isono KI, Ohbo K, Endo TA, Ohara O, Maekawa M, Toyama Y, Ito C, Toshimori K, Helin K, Ogonuki N, Inoue K, Ogura A, Yamagata K, Kitabayashi I, Koseki H.

Mol Cell Biol. 2017 Sep 12;37(19). pii: e00082-17. doi: 10.1128/MCB.00082-17. Print 2017 Oct 1.

10.

Acetate-mediated novel survival strategy against drought in plants.

Kim JM, To TK, Matsui A, Tanoi K, Kobayashi NI, Matsuda F, Habu Y, Ogawa D, Sakamoto T, Matsunaga S, Bashir K, Rasheed S, Ando M, Takeda H, Kawaura K, Kusano M, Fukushima A, Endo TA, Kuromori T, Ishida J, Morosawa T, Tanaka M, Torii C, Takebayashi Y, Sakakibara H, Ogihara Y, Saito K, Shinozaki K, Devoto A, Seki M.

Nat Plants. 2017 Jun 26;3:17097. doi: 10.1038/nplants.2017.97. Erratum in: Nat Plants. 2017 Jul 17;3:17119.

PMID:
28650429
11.

CFC1 is a cancer stemness-regulating factor in neuroblastoma.

Chikaraishi K, Takenobu H, Sugino RP, Mukae K, Akter J, Haruta M, Kurosumi M, Endo TA, Koseki H, Shimojo N, Ohira M, Kamijo T.

Oncotarget. 2017 Jul 11;8(28):45046-45059. doi: 10.18632/oncotarget.18464.

12.

Essential Roles of SATB1 in Specifying T Lymphocyte Subsets.

Kakugawa K, Kojo S, Tanaka H, Seo W, Endo TA, Kitagawa Y, Muroi S, Tenno M, Yasmin N, Kohwi Y, Sakaguchi S, Kowhi-Shigematsu T, Taniuchi I.

Cell Rep. 2017 May 9;19(6):1176-1188. doi: 10.1016/j.celrep.2017.04.038.

13.

Correction: PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes.

Endoh M, Endo TA, Shinga J, Hayashi K, Farcas A, Ma KW, Ito S, Sharif J, Endoh T, Onaga N, Nakayama M, Ishikura T, Masui O, Kessler BM, Suda T, Ohara O, Okuda A, Klose RJ, Koseki H.

Elife. 2017 Apr 25;6. pii: e27970. doi: 10.7554/eLife.27970. No abstract available.

14.

PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes.

Endoh M, Endo TA, Shinga J, Hayashi K, Farcas A, Ma KW, Ito S, Sharif J, Endoh T, Onaga N, Nakayama M, Ishikura T, Masui O, Kessler BM, Suda T, Ohara O, Okuda A, Klose R, Koseki H.

Elife. 2017 Mar 17;6. pii: e21064. doi: 10.7554/eLife.21064. Erratum in: Elife. 2017 Apr 25;6:.

15.

Alternative pathway for the development of Vα14+ NKT cells directly from CD4-CD8- thymocytes that bypasses the CD4+CD8+ stage.

Dashtsoodol N, Shigeura T, Aihara M, Ozawa R, Kojo S, Harada M, Endo TA, Watanabe T, Ohara O, Taniguchi M.

Nat Immunol. 2017 Mar;18(3):274-282. doi: 10.1038/ni.3668. Epub 2017 Jan 30.

PMID:
28135253
16.

Conversion of T cells to B cells by inactivation of polycomb-mediated epigenetic suppression of the B-lineage program.

Ikawa T, Masuda K, Endo TA, Endo M, Isono K, Koseki Y, Nakagawa R, Kometani K, Takano J, Agata Y, Katsura Y, Kurosaki T, Vidal M, Koseki H, Kawamoto H.

Genes Dev. 2016 Nov 15;30(22):2475-2485. Epub 2016 Dec 2.

17.

A Histone Methyltransferase ESET Is Critical for T Cell Development.

Takikita S, Muro R, Takai T, Otsubo T, Kawamura YI, Dohi T, Oda H, Kitajima M, Oshima K, Hattori M, Endo TA, Toyoda T, Weis J, Shinkai Y, Suzuki H.

J Immunol. 2016 Sep 15;197(6):2269-79. doi: 10.4049/jimmunol.1502486. Epub 2016 Aug 10.

18.

Efficient Regeneration of Human Vα24+ Invariant Natural Killer T Cells and Their Anti-Tumor Activity In Vivo.

Yamada D, Iyoda T, Vizcardo R, Shimizu K, Sato Y, Endo TA, Kitahara G, Okoshi M, Kobayashi M, Sakurai M, Ohara O, Taniguchi M, Koseki H, Fujii SI.

Stem Cells. 2016 Dec;34(12):2852-2860. doi: 10.1002/stem.2465. Epub 2016 Aug 1.

19.

Mouse oocytes suppress miR-322-5p expression in ovarian granulosa cells.

Sumitomo J, Emori C, Matsuno Y, Ueno M, Kawasaki K, Endo TA, Shiroguchi K, Fujii W, Naito K, Sugiura K.

J Reprod Dev. 2016 Aug 25;62(4):393-9. doi: 10.1262/jrd.2015-161. Epub 2016 May 16.

20.

Activation of Endogenous Retroviruses in Dnmt1(-/-) ESCs Involves Disruption of SETDB1-Mediated Repression by NP95 Binding to Hemimethylated DNA.

Sharif J, Endo TA, Nakayama M, Karimi MM, Shimada M, Katsuyama K, Goyal P, Brind'Amour J, Sun MA, Sun Z, Ishikura T, Mizutani-Koseki Y, Ohara O, Shinkai Y, Nakanishi M, Xie H, Lorincz MC, Koseki H.

Cell Stem Cell. 2016 Jul 7;19(1):81-94. doi: 10.1016/j.stem.2016.03.013. Epub 2016 Apr 14.

21.

A Stress-Activated Transposon in Arabidopsis Induces Transgenerational Abscisic Acid Insensitivity.

Ito H, Kim JM, Matsunaga W, Saze H, Matsui A, Endo TA, Harukawa Y, Takagi H, Yaegashi H, Masuta Y, Masuda S, Ishida J, Tanaka M, Takahashi S, Morosawa T, Toyoda T, Kakutani T, Kato A, Seki M.

Sci Rep. 2016 Mar 15;6:23181. doi: 10.1038/srep23181.

22.

RING1 proteins contribute to early proximal-distal specification of the forelimb bud by restricting Meis2 expression.

Yakushiji-Kaminatsui N, Kondo T, Endo TA, Koseki Y, Kondo K, Ohara O, Vidal M, Koseki H.

Development. 2016 Jan 15;143(2):276-85. doi: 10.1242/dev.127506. Epub 2015 Dec 16.

23.

Pitfalls in global normalization of ChIP-seq data in CD4(+) T cells treated with butyrate: A possible solution strategy.

Furusawa Y, Endo TA, Obata Y, Ohara O, Ohno H, Hase K.

Genom Data. 2014 Jun 27;2:176-80. doi: 10.1016/j.gdata.2014.06.018. eCollection 2014 Dec.

24.

Quality control method for RNA-seq using single nucleotide polymorphism allele frequency.

Endo TA.

Genes Cells. 2014 Nov;19(11):821-9. doi: 10.1111/gtc.12178. Epub 2014 Sep 21.

25.

Basophil-derived interleukin-4 controls the function of natural helper cells, a member of ILC2s, in lung inflammation.

Motomura Y, Morita H, Moro K, Nakae S, Artis D, Endo TA, Kuroki Y, Ohara O, Koyasu S, Kubo M.

Immunity. 2014 May 15;40(5):758-71. doi: 10.1016/j.immuni.2014.04.013.

26.

The epigenetic regulator Uhrf1 facilitates the proliferation and maturation of colonic regulatory T cells.

Obata Y, Furusawa Y, Endo TA, Sharif J, Takahashi D, Atarashi K, Nakayama M, Onawa S, Fujimura Y, Takahashi M, Ikawa T, Otsubo T, Kawamura YI, Dohi T, Tajima S, Masumoto H, Ohara O, Honda K, Hori S, Ohno H, Koseki H, Hase K.

Nat Immunol. 2014 Jun;15(6):571-9. doi: 10.1038/ni.2886. Epub 2014 Apr 28.

PMID:
24777532
27.

Polycomb potentiates meis2 activation in midbrain by mediating interaction of the promoter with a tissue-specific enhancer.

Kondo T, Isono K, Kondo K, Endo TA, Itohara S, Vidal M, Koseki H.

Dev Cell. 2014 Jan 13;28(1):94-101. doi: 10.1016/j.devcel.2013.11.021. Epub 2013 Dec 26.

28.

Cell cycle-dependent turnover of 5-hydroxymethyl cytosine in mouse embryonic stem cells.

Otani J, Kimura H, Sharif J, Endo TA, Mishima Y, Kawakami T, Koseki H, Shirakawa M, Suetake I, Tajima S.

PLoS One. 2013 Dec 10;8(12):e82961. doi: 10.1371/journal.pone.0082961. eCollection 2013.

29.

Ash1l methylates Lys36 of histone H3 independently of transcriptional elongation to counteract polycomb silencing.

Miyazaki H, Higashimoto K, Yada Y, Endo TA, Sharif J, Komori T, Matsuda M, Koseki Y, Nakayama M, Soejima H, Handa H, Koseki H, Hirose S, Nishioka K.

PLoS Genet. 2013 Nov;9(11):e1003897. doi: 10.1371/journal.pgen.1003897. Epub 2013 Nov 7.

30.

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells.

Furusawa Y, Obata Y, Fukuda S, Endo TA, Nakato G, Takahashi D, Nakanishi Y, Uetake C, Kato K, Kato T, Takahashi M, Fukuda NN, Murakami S, Miyauchi E, Hino S, Atarashi K, Onawa S, Fujimura Y, Lockett T, Clarke JM, Topping DL, Tomita M, Hori S, Ohara O, Morita T, Koseki H, Kikuchi J, Honda K, Hase K, Ohno H.

Nature. 2013 Dec 19;504(7480):446-50. doi: 10.1038/nature12721. Epub 2013 Nov 13. Erratum in: Nature. 2014 Feb 13;506(7487):254.

PMID:
24226770
31.

SAM domain polymerization links subnuclear clustering of PRC1 to gene silencing.

Isono K, Endo TA, Ku M, Yamada D, Suzuki R, Sharif J, Ishikura T, Toyoda T, Bernstein BE, Koseki H.

Dev Cell. 2013 Sep 30;26(6):565-77. doi: 10.1016/j.devcel.2013.08.016.

32.

Highly reproducible ChIP-on-chip analysis to identify genome-wide protein binding and chromatin status in Arabidopsis thaliana.

Kim JM, To TK, Tanaka M, Endo TA, Matsui A, Ishida J, Robertson FC, Toyoda T, Seki M.

Methods Mol Biol. 2014;1062:405-26. doi: 10.1007/978-1-62703-580-4_22.

PMID:
24057379
33.

Embracing change to remain the same: conservation of polycomb functions despite divergence of binding motifs among species.

Sharif J, Endo TA, Ito S, Ohara O, Koseki H.

Curr Opin Cell Biol. 2013 Jun;25(3):305-13. doi: 10.1016/j.ceb.2013.02.009. Epub 2013 Mar 13. Review.

PMID:
23478215
34.

Scratch regulates neuronal migration onset via an epithelial-mesenchymal transition-like mechanism.

Itoh Y, Moriyama Y, Hasegawa T, Endo TA, Toyoda T, Gotoh Y.

Nat Neurosci. 2013 Apr;16(4):416-25. doi: 10.1038/nn.3336. Epub 2013 Feb 24.

PMID:
23434913
35.

Role of SOX17 in hematopoietic development from human embryonic stem cells.

Nakajima-Takagi Y, Osawa M, Oshima M, Takagi H, Miyagi S, Endoh M, Endo TA, Takayama N, Eto K, Toyoda T, Koseki H, Nakauchi H, Iwama A.

Blood. 2013 Jan 17;121(3):447-58. doi: 10.1182/blood-2012-05-431403. Epub 2012 Nov 20.

PMID:
23169777
36.

Histone H2A mono-ubiquitination is a crucial step to mediate PRC1-dependent repression of developmental genes to maintain ES cell identity.

Endoh M, Endo TA, Endoh T, Isono K, Sharif J, Ohara O, Toyoda T, Ito T, Eskeland R, Bickmore WA, Vidal M, Bernstein BE, Koseki H.

PLoS Genet. 2012;8(7):e1002774. doi: 10.1371/journal.pgen.1002774. Epub 2012 Jul 26.

37.

RYBP represses endogenous retroviruses and preimplantation- and germ line-specific genes in mouse embryonic stem cells.

Hisada K, Sánchez C, Endo TA, Endoh M, Román-Trufero M, Sharif J, Koseki H, Vidal M.

Mol Cell Biol. 2012 Mar;32(6):1139-49. doi: 10.1128/MCB.06441-11. Epub 2012 Jan 23.

38.

The Hbo1-Brd1/Brpf2 complex is responsible for global acetylation of H3K14 and required for fetal liver erythropoiesis.

Mishima Y, Miyagi S, Saraya A, Negishi M, Endoh M, Endo TA, Toyoda T, Shinga J, Katsumoto T, Chiba T, Yamaguchi N, Kitabayashi I, Koseki H, Iwama A.

Blood. 2011 Sep 1;118(9):2443-53. doi: 10.1182/blood-2011-01-331892. Epub 2011 Jul 13.

PMID:
21753189
39.

Genome-wide analysis of target genes regulated by HoxB4 in hematopoietic stem and progenitor cells developing from embryonic stem cells.

Oshima M, Endoh M, Endo TA, Toyoda T, Nakajima-Takagi Y, Sugiyama F, Koseki H, Kyba M, Iwama A, Osawa M.

Blood. 2011 Apr 14;117(15):e142-50. doi: 10.1182/blood-2010-12-323212. Epub 2011 Feb 22.

40.

Mammalian polycomb-like Pcl2/Mtf2 is a novel regulatory component of PRC2 that can differentially modulate polycomb activity both at the Hox gene cluster and at Cdkn2a genes.

Li X, Isono K, Yamada D, Endo TA, Endoh M, Shinga J, Mizutani-Koseki Y, Otte AP, Casanova M, Kitamura H, Kamijo T, Sharif J, Ohara O, Toyada T, Bernstein BE, Brockdorff N, Koseki H.

Mol Cell Biol. 2011 Jan;31(2):351-64. doi: 10.1128/MCB.00259-10. Epub 2010 Nov 8. Erratum in: Mol Cell Biol. 2014 Jul;34(14):2773.

41.

Divergence of CpG island promoters: a consequence or cause of evolution?

Sharif J, Endo TA, Toyoda T, Koseki H.

Dev Growth Differ. 2010 Aug;52(6):545-54. doi: 10.1111/j.1440-169X.2010.01193.x.

PMID:
20646027
42.

Murine induced pluripotent stem cells can be derived from and differentiate into natural killer T cells.

Watarai H, Fujii S, Yamada D, Rybouchkin A, Sakata S, Nagata Y, Iida-Kobayashi M, Sekine-Kondo E, Shimizu K, Shozaki Y, Sharif J, Matsuda M, Mochiduki S, Hasegawa T, Kitahara G, Endo TA, Toyoda T, Ohara O, Harigaya K, Koseki H, Taniguchi M.

J Clin Invest. 2010 Jul;120(7):2610-8. doi: 10.1172/JCI42027.

43.

Arabidopsis tiling array analysis to identify the stress-responsive genes.

Matsui A, Ishida J, Morosawa T, Okamoto M, Kim JM, Kurihara Y, Kawashima M, Tanaka M, To TK, Nakaminami K, Kaminuma E, Endo TA, Mochizuki Y, Kawaguchi S, Kobayashi N, Shinozaki K, Toyoda T, Seki M.

Methods Mol Biol. 2010;639:141-55. doi: 10.1007/978-1-60761-702-0_8.

PMID:
20387044
44.

Genome-wide analysis of endogenous abscisic acid-mediated transcription in dry and imbibed seeds of Arabidopsis using tiling arrays.

Okamoto M, Tatematsu K, Matsui A, Morosawa T, Ishida J, Tanaka M, Endo TA, Mochizuki Y, Toyoda T, Kamiya Y, Shinozaki K, Nambara E, Seki M.

Plant J. 2010 Apr 1;62(1):39-51. doi: 10.1111/j.1365-313X.2010.04135.x. Epub 2010 Jan 20.

45.

Polycomb limits the neurogenic competence of neural precursor cells to promote astrogenic fate transition.

Hirabayashi Y, Suzki N, Tsuboi M, Endo TA, Toyoda T, Shinga J, Koseki H, Vidal M, Gotoh Y.

Neuron. 2009 Sep 10;63(5):600-13. doi: 10.1016/j.neuron.2009.08.021.

46.

OmicBrowse: a Flash-based high-performance graphics interface for genomic resources.

Matsushima A, Kobayashi N, Mochizuki Y, Ishii M, Kawaguchi S, Endo TA, Umetsu R, Makita Y, Toyoda T.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W57-62. doi: 10.1093/nar/gkp404. Epub 2009 Jun 15.

47.

Detecting linkage between a trait and a marker in a random mating population without pedigree record.

Mano S, Endo TA, Oka A, Ozawa A, Gojobori T, Inoko H.

PLoS One. 2009;4(3):e4956. doi: 10.1371/journal.pone.0004956. Epub 2009 Mar 24.

48.

Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array.

Matsui A, Ishida J, Morosawa T, Mochizuki Y, Kaminuma E, Endo TA, Okamoto M, Nambara E, Nakajima M, Kawashima M, Satou M, Kim JM, Kobayashi N, Toyoda T, Shinozaki K, Seki M.

Plant Cell Physiol. 2008 Aug;49(8):1135-49. doi: 10.1093/pcp/pcn101. Epub 2008 Jul 13.

PMID:
18625610
49.

Polycomb group proteins Ring1A/B are functionally linked to the core transcriptional regulatory circuitry to maintain ES cell identity.

Endoh M, Endo TA, Endoh T, Fujimura Y, Ohara O, Toyoda T, Otte AP, Okano M, Brockdorff N, Vidal M, Koseki H.

Development. 2008 Apr;135(8):1513-24. doi: 10.1242/dev.014340. Epub 2008 Mar 13.

50.

The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA.

Sharif J, Muto M, Takebayashi S, Suetake I, Iwamatsu A, Endo TA, Shinga J, Mizutani-Koseki Y, Toyoda T, Okamura K, Tajima S, Mitsuya K, Okano M, Koseki H.

Nature. 2007 Dec 6;450(7171):908-12. Epub 2007 Nov 11.

PMID:
17994007

Supplemental Content

Support Center