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Differentiation of 2-hydroxyglutarate enantiomers and its lactones by gas chromatography/electron ionization tandem mass spectrometry.

Strain SK, Groves MD, Emmett MR.

Rapid Commun Mass Spectrom. 2019 Sep 15;33(17):1401-1409. doi: 10.1002/rcm.8485.


Dehydration Polymerization for Poly(hetero)arene Conjugated Polymers.

Mirabal RA, Vanderzwet L, Abuadas S, Emmett MR, Schipper D.

Chemistry. 2018 Aug 22;24(47):12231-12235. doi: 10.1002/chem.201800642. Epub 2018 Apr 14.


Measurement of Postreplicative DNA Metabolism and Damage in the Rodent Brain.

Patel JP, Sowers ML, Herring JL, Theruvathu JA, Emmett MR, Hawkins BE, Zhang K, DeWitt DS, Prough DS, Sowers LC.

Chem Res Toxicol. 2015 Dec 21;28(12):2352-63. doi: 10.1021/acs.chemrestox.5b00359. Epub 2015 Nov 24.


ESI-MS/MS and MALDI-IMS Localization Reveal Alterations in Phosphatidic Acid, Diacylglycerol, and DHA in Glioma Stem Cell Xenografts.

Wildburger NC, Wood PL, Gumin J, Lichti CF, Emmett MR, Lang FF, Nilsson CL.

J Proteome Res. 2015 Jun 5;14(6):2511-9. doi: 10.1021/acs.jproteome.5b00076. Epub 2015 Apr 29.


Quantitative proteomics reveals protein-protein interactions with fibroblast growth factor 12 as a component of the voltage-gated sodium channel 1.2 (nav1.2) macromolecular complex in Mammalian brain.

Wildburger NC, Ali SR, Hsu WC, Shavkunov AS, Nenov MN, Lichti CF, LeDuc RD, Mostovenko E, Panova-Elektronova NI, Emmett MR, Nilsson CL, Laezza F.

Mol Cell Proteomics. 2015 May;14(5):1288-300. doi: 10.1074/mcp.M114.040055. Epub 2015 Feb 27.


Carbocycles from donor-acceptor cyclopropanes.

Grover HK, Emmett MR, Kerr MA.

Org Biomol Chem. 2015 Jan 21;13(3):655-71. doi: 10.1039/c4ob02117g.


Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome.

Nilsson CL, Mostovenko E, Lichti CF, Ruggles K, Fenyö D, Rosenbloom KR, Hancock WS, Paik YK, Omenn GS, LaBaer J, Kroes RA, Uhlén M, Hober S, Végvári Á, Andrén PE, Sulman EP, Lang FF, Fuentes M, Carlsohn E, Emmett MR, Moskal JR, Berven FS, Fehniger TE, Marko-Varga G.

J Proteome Res. 2015 Feb 6;14(2):603-8. doi: 10.1021/pr500564q. Epub 2014 Nov 26.


γ-Substituted butanolides from cyclopropane hemimalonates: an expedient synthesis of natural (R)-dodecan-4-olide.

Grover HK, Emmett MR, Kerr MA.

Org Lett. 2013 Sep 20;15(18):4838-41. doi: 10.1021/ol402252u. Epub 2013 Sep 5.


Integrative biological analysis for neuropsychopharmacology.

Emmett MR, Kroes RA, Moskal JR, Conrad CA, Priebe W, Laezza F, Meyer-Baese A, Nilsson CL.

Neuropsychopharmacology. 2014 Jan;39(1):5-23. doi: 10.1038/npp.2013.156. Epub 2013 Jun 26. Review.


Tandem ring-opening decarboxylation of cyclopropane hemimalonates with sodium azide: a short route to γ-aminobutyric acid esters.

Emmett MR, Grover HK, Kerr MA.

J Org Chem. 2012 Aug 3;77(15):6634-7. doi: 10.1021/jo3010606. Epub 2012 Jul 16.


Epitope mapping of a 95 kDa antigen in complex with antibody by solution-phase amide backbone hydrogen/deuterium exchange monitored by Fourier transform ion cyclotron resonance mass spectrometry.

Zhang Q, Willison LN, Tripathi P, Sathe SK, Roux KH, Emmett MR, Blakney GT, Zhang HM, Marshall AG.

Anal Chem. 2011 Sep 15;83(18):7129-36. doi: 10.1021/ac201501z. Epub 2011 Aug 23.


Characterization of the phosphoproteome in androgen-repressed human prostate cancer cells by Fourier transform ion cyclotron resonance mass spectrometry.

Wang X, Stewart PA, Cao Q, Sang QX, Chung LW, Emmett MR, Marshall AG.

J Proteome Res. 2011 Sep 2;10(9):3920-8. doi: 10.1021/pr2000144. Epub 2011 Jul 26.


Nucleophilic ring opening of cyclopropane hemimalonates using internal Brønsted acid activation.

Emmett MR, Kerr MA.

Org Lett. 2011 Aug 19;13(16):4180-3. doi: 10.1021/ol201486x. Epub 2011 Jul 18.


Robust stability analysis and design under consideration of multiple feedback loops of the tryptophan regulatory network of Escherichia coli.

Meyer-Baese A, Theis F, Emmett MR.

Adv Exp Med Biol. 2010;680:189-97. doi: 10.1007/978-1-4419-5913-3_22.


Determining and interpreting correlations in lipidomic networks found in glioblastoma cells.

Görke R, Meyer-Bäse A, Wagner D, He H, Emmett MR, Conrad CA.

BMC Syst Biol. 2010 Sep 7;4:126. doi: 10.1186/1752-0509-4-126.


New reagents for enhanced liquid chromatographic separation and charging of intact protein ions for electrospray ionization mass spectrometry.

Valeja SG, Tipton JD, Emmett MR, Marshall AG.

Anal Chem. 2010 Sep 1;82(17):7515-9. doi: 10.1021/ac1016858.


Computing H/D-exchange rates of single residues from data of proteolytic fragments.

Althaus E, Canzar S, Ehrler C, Emmett MR, Karrenbauer A, Marshall AG, Meyer-Bäse A, Tipton JD, Zhang HM.

BMC Bioinformatics. 2010 Aug 11;11:424. doi: 10.1186/1471-2105-11-424.


Overexpression of ST6GalNAcV, a ganglioside-specific alpha2,6-sialyltransferase, inhibits glioma growth in vivo.

Kroes RA, He H, Emmett MR, Nilsson CL, Leach FE 3rd, Amster IJ, Marshall AG, Moskal JR.

Proc Natl Acad Sci U S A. 2010 Jul 13;107(28):12646-51. doi: 10.1073/pnas.0909862107. Epub 2010 Jun 28.


Advantages of isotopic depletion of proteins for hydrogen/deuterium exchange experiments monitored by mass spectrometry.

Bou-Assaf GM, Chamoun JE, Emmett MR, Fajer PG, Marshall AG.

Anal Chem. 2010 Apr 15;82(8):3293-9. doi: 10.1021/ac100079z.


Glycomic and transcriptomic response of GSC11 glioblastoma stem cells to STAT3 phosphorylation inhibition and serum-induced differentiation.

He H, Nilsson CL, Emmett MR, Marshall AG, Kroes RA, Moskal JR, Ji Y, Colman H, Priebe W, Lang FF, Conrad CA.

J Proteome Res. 2010 May 7;9(5):2098-108. doi: 10.1021/pr900793a.


Automated data reduction for hydrogen/deuterium exchange experiments, enabled by high-resolution Fourier transform ion cyclotron resonance mass spectrometry.

Kazazic S, Zhang HM, Schaub TM, Emmett MR, Hendrickson CL, Blakney GT, Marshall AG.

J Am Soc Mass Spectrom. 2010 Apr;21(4):550-8. doi: 10.1016/j.jasms.2009.12.016. Epub 2010 Jan 4.


Conformational states of human purine nucleoside phosphorylase at rest, at work, and with transition state analogues.

Edwards AA, Tipton JD, Brenowitz MD, Emmett MR, Marshall AG, Evans GB, Tyler PC, Schramm VL.

Biochemistry. 2010 Mar 9;49(9):2058-67. doi: 10.1021/bi902041j.


Simultaneous reduction and digestion of proteins with disulfide bonds for hydrogen/deuterium exchange monitored by mass spectrometry.

Zhang HM, McLoughlin SM, Frausto SD, Tang H, Emmett MR, Marshall AG.

Anal Chem. 2010 Feb 15;82(4):1450-4. doi: 10.1021/ac902550n.


Drug binding and resistance mechanism of KIT tyrosine kinase revealed by hydrogen/deuterium exchange FTICR mass spectrometry.

Zhang HM, Yu X, Greig MJ, Gajiwala KS, Wu JC, Diehl W, Lunney EA, Emmett MR, Marshall AG.

Protein Sci. 2010 Apr;19(4):703-15. doi: 10.1002/pro.347.


Sequential proteolysis and high-field FTICR MS to determine disulfide connectivity and 4-maleimide TEMPO spin-label location in L126C GM2 activator protein.

Tipton JD, Carter JD, Mathias JD, Emmett MR, Fanucci GE, Marshall AG.

Anal Chem. 2009 Sep 15;81(18):7611-7. doi: 10.1021/ac9009935.


Global stability analysis and robust design of multi-time-scale biological networks under parametric uncertainties.

Meyer-Baese A, Koshkouei AJ, Emmett MR, Goodall DP.

Neural Netw. 2009 Jul-Aug;22(5-6):658-63. doi: 10.1016/j.neunet.2009.06.051. Epub 2009 Jul 14.


Polar lipid remodeling and increased sulfatide expression are associated with the glioma therapeutic candidates, wild type p53 elevation and the topoisomerase-1 inhibitor, irinotecan.

He H, Nilsson CL, Emmett MR, Ji Y, Marshall AG, Kroes RA, Moskal JR, Colman H, Lang FF, Conrad CA.

Glycoconj J. 2010 Jan;27(1):27-38. doi: 10.1007/s10719-009-9249-6. Epub 2009 Jun 26.


Dephosphorylation of major sperm protein (MSP) fiber protein 3 by protein phosphatase 2A during cell body retraction in the MSP-based amoeboid motility of Ascaris sperm.

Yi K, Wang X, Emmett MR, Marshall AG, Stewart M, Roberts TM.

Mol Biol Cell. 2009 Jul;20(14):3200-8. doi: 10.1091/mbc.E09-03-0240. Epub 2009 May 20.


Periodic sequence distribution of product ion abundances in electron capture dissociation of amphipathic peptides and proteins.

Ben Hamidane H, He H, Tsybin OY, Emmett MR, Hendrickson CL, Marshall AG, Tsybin YO.

J Am Soc Mass Spectrom. 2009 Jun;20(6):1182-92. doi: 10.1016/j.jasms.2009.02.015. Epub 2009 Feb 13.


KIT kinase mutants show unique mechanisms of drug resistance to imatinib and sunitinib in gastrointestinal stromal tumor patients.

Gajiwala KS, Wu JC, Christensen J, Deshmukh GD, Diehl W, DiNitto JP, English JM, Greig MJ, He YA, Jacques SL, Lunney EA, McTigue M, Molina D, Quenzer T, Wells PA, Yu X, Zhang Y, Zou A, Emmett MR, Marshall AG, Zhang HM, Demetri GD.

Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1542-7. doi: 10.1073/pnas.0812413106. Epub 2009 Jan 21.


Fast reversed-phase liquid chromatography to reduce back exchange and increase throughput in H/D exchange monitored by FT-ICR mass spectrometry.

Zhang HM, Bou-Assaf GM, Emmett MR, Marshall AG.

J Am Soc Mass Spectrom. 2009 Mar;20(3):520-4. doi: 10.1016/j.jasms.2008.11.010. Epub 2008 Nov 21.


Method for lipidomic analysis: p53 expression modulation of sulfatide, ganglioside, and phospholipid composition of U87 MG glioblastoma cells.

He H, Conrad CA, Nilsson CL, Ji Y, Schaub TM, Marshall AG, Emmett MR.

Anal Chem. 2007 Nov 15;79(22):8423-30. Epub 2007 Oct 12.


Fourier transform ion cyclotron resonance: state of the art.

Marshall AG, Hendrickson CL, Emmett MR, Rodgers RP, Blakney GT, Nilsson CL.

Eur J Mass Spectrom (Chichester). 2007;13(1):57-9.


Ion activation in electron capture dissociation to distinguish between N-terminal and C-terminal product ions.

Tsybin YO, He H, Emmett MR, Hendrickson CL, Marshall AG.

Anal Chem. 2007 Oct 15;79(20):7596-602. Epub 2007 Sep 18.


Analysis of O-glycan heterogeneity in IgA1 myeloma proteins by Fourier transform ion cyclotron resonance mass spectrometry: implications for IgA nephropathy.

Renfrow MB, Mackay CL, Chalmers MJ, Julian BA, Mestecky J, Kilian M, Poulsen K, Emmett MR, Marshall AG, Novak J.

Anal Bioanal Chem. 2007 Nov;389(5):1397-407. Epub 2007 Aug 22.


Proteomic investigation of glioblastoma cell lines treated with wild-type p53 and cytotoxic chemotherapy demonstrates an association between galectin-1 and p53 expression.

Puchades M, Nilsson CL, Emmett MR, Aldape KD, Ji Y, Lang FF, Liu TJ, Conrad CA.

J Proteome Res. 2007 Feb;6(2):869-75.


De novo sequencing and disulfide mapping of a bromotryptophan-containing conotoxin by Fourier transform ion cyclotron resonance mass spectrometry.

Nair SS, Nilsson CL, Emmett MR, Schaub TM, Gowd KH, Thakur SS, Krishnan KS, Balaram P, Marshall AG.

Anal Chem. 2006 Dec 1;78(23):8082-8.


Supercritical fluid chromatography reduction of hydrogen/deuterium back exchange in solution-phase hydrogen/deuterium exchange with mass spectrometric analysis.

Emmett MR, Kazazic S, Marshall AG, Chen W, Shi SD, Bolaños B, Greig MJ.

Anal Chem. 2006 Oct 1;78(19):7058-60.


Structural characterization of an unusually stable cyclic peptide, kalata B2 from Oldenlandia affinis.

Nair SS, Romanuka J, Billeter M, Skjeldal L, Emmett MR, Nilsson CL, Marshall AG.

Biochim Biophys Acta. 2006 Oct;1764(10):1568-76. Epub 2006 Aug 11.


Charge location directs electron capture dissociation of peptide dications.

Tsybin YO, Haselmann KF, Emmett MR, Hendrickson CL, Marshall AG.

J Am Soc Mass Spectrom. 2006 Dec;17(12):1704-11. Epub 2006 Sep 11.


Characterization of the capsid protein glycosylation of adeno-associated virus type 2 by high-resolution mass spectrometry.

Murray S, Nilsson CL, Hare JT, Emmett MR, Korostelev A, Ongley H, Marshall AG, Chapman MS.

J Virol. 2006 Jun;80(12):6171-6.


Interaction of packaging motor with the polymerase complex of dsRNA bacteriophage.

Lísal J, Kainov DE, Lam TT, Emmett MR, Wei H, Gottlieb P, Marshall AG, Tuma R.

Virology. 2006 Jul 20;351(1):73-9. Epub 2006 Apr 27.


Identifying bryostatins and potential precursors from the bryozoan Bugula neritina.

Manning TJ, Land M, Rhodes E, Chamberlin L, Rudloe J, Phillips D, Lam TT, Purcell J, Cooper HJ, Emmett MR, Marshall AG.

Nat Prod Res. 2005 Jul;19(5):467-91.


Functional visualization of viral molecular motor by hydrogen-deuterium exchange reveals transient states.

Lísal J, Lam TT, Kainov DE, Emmett MR, Marshall AG, Tuma R.

Nat Struct Mol Biol. 2005 May;12(5):460-6. Epub 2005 Apr 17.


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