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Items: 1 to 50 of 186

1.

Molecular Signature and Mechanisms of Hepatitis D Virus-Associated Hepatocellular Carcinoma.

Diaz G, Engle RE, Tice A, Melis M, Montenegro S, Rodriguez-Canales J, Hanson J, Emmert-Buck MR, Bock KW, Moore IN, Zamboni F, Govindarajan S, Kleiner DE, Farci P.

Mol Cancer Res. 2018 Sep;16(9):1406-1419. doi: 10.1158/1541-7786.MCR-18-0012. Epub 2018 Jun 1.

PMID:
29858376
2.

High-Throughput Microdissection for Next-Generation Sequencing.

Rosenberg AZ, Armani MD, Fetsch PA, Xi L, Pham TT, Raffeld M, Chen Y, O'Flaherty N, Stussman R, Blackler AR, Du Q, Hanson JC, Roth MJ, Filie AC, Roh MH, Emmert-Buck MR, Hipp JD, Tangrea MA.

PLoS One. 2016 Mar 21;11(3):e0151775. doi: 10.1371/journal.pone.0151775. eCollection 2016.

3.

Laser Microdissection.

Frost AR, Eltoum IE, Siegal GP, Emmert-Buck MR, Tangrea MA.

Curr Protoc Mol Biol. 2015 Oct 1;112:25A.1.1-30. doi: 10.1002/0471142727.mb25a01s112.

PMID:
26423586
4.

The evolutionary history of lethal metastatic prostate cancer.

Gundem G, Van Loo P, Kremeyer B, Alexandrov LB, Tubio JMC, Papaemmanuil E, Brewer DS, Kallio HML, Högnäs G, Annala M, Kivinummi K, Goody V, Latimer C, O'Meara S, Dawson KJ, Isaacs W, Emmert-Buck MR, Nykter M, Foster C, Kote-Jarai Z, Easton D, Whitaker HC; ICGC Prostate Group, Neal DE, Cooper CS, Eeles RA, Visakorpi T, Campbell PJ, McDermott U, Wedge DC, Bova GS.

Nature. 2015 Apr 16;520(7547):353-357. doi: 10.1038/nature14347. Epub 2015 Apr 1.

5.

Menin immunoreactivity in secretory granules of human pancreatic islet cells.

Debelenko LV, Agarwal S, Du Q, Yan W, Erickson HS, Abu-Asab M, Raffeld MA, Libutti SK, Marx SJ, Emmert-Buck MR.

Appl Immunohistochem Mol Morphol. 2014 Nov-Dec;22(10):748-55. doi: 10.1097/PAI.0000000000000046.

6.

SIVQ-LCM protocol for the ArcturusXT instrument.

Hipp JD, Cheng J, Hanson JC, Rosenberg AZ, Emmert-Buck MR, Tangrea MA, Balis UJ.

J Vis Exp. 2014 Jul 23;(89). doi: 10.3791/51662.

7.

Multiplex quantitative measurement of mRNAs from fixed tissue microarray sections.

Armani M, Tangrea M, Yang B, Rosenberg A, Ylaya K, Morris J, Rodriguez-Canales J, Hanson J, Shapiro B, Emmert-Buck MR, Smela E, Hewitt SM.

Appl Immunohistochem Mol Morphol. 2014 May-Jun;22(5):323-30. doi: 10.1097/PDM.0000000000000039. Review.

8.

Deletion of the olfactomedin 4 gene is associated with progression of human prostate cancer.

Li H, Rodriguez-Canales J, Liu W, Zhu J, Hanson JC, Pack S, Zhuang Z, Emmert-Buck MR, Rodgers GP.

Am J Pathol. 2013 Oct;183(4):1329-38. doi: 10.1016/j.ajpath.2013.06.028.

9.

Validation of esophageal squamous cell carcinoma candidate genes from high-throughput transcriptomic studies.

Du Q, Yan W, Burton VH, Hewitt SM, Wang L, Hu N, Taylor PR, Armani MD, Mukherjee S, Emmert-Buck MR, Tangrea MA.

Am J Cancer Res. 2013 Aug 14;3(4):402-10. eCollection 2013.

10.

Analysis of transcription factor mRNAs in identified oxytocin and vasopressin magnocellular neurons isolated by laser capture microdissection.

Humerick M, Hanson J, Rodriguez-Canales J, Lubelski D, Rashid OM, Salinas YD, Shi Y, Ponzio T, Fields R, Emmert-Buck MR, Gainer H.

PLoS One. 2013 Jul 24;8(7):e69407. doi: 10.1371/journal.pone.0069407. Print 2013.

11.

Proteomic analysis of nuclei dissected from fixed rat brain tissue using expression microdissection.

Blackler AR, Morgan NY, Gao B, Olano LR, Armani MD, Romantseva E, Kakareka JW, Bonner RF, Mukherjee S, Xiao B, Tran K, Pohida TJ, Emmert-Buck MR, Tangrea MA, Markey SP.

Anal Chem. 2013 Aug 6;85(15):7139-45. doi: 10.1021/ac400691k. Epub 2013 Jul 19.

12.

Measuring collective cell movement and extracellular matrix interactions using magnetic resonance imaging.

Chen Y, Dodd SJ, Tangrea MA, Emmert-Buck MR, Koretsky AP.

Sci Rep. 2013;3:1879. doi: 10.1038/srep01879.

13.

Proteomic analysis of frozen tissue samples using laser capture microdissection.

Mukherjee S, Rodriguez-Canales J, Hanson J, Emmert-Buck MR, Tangrea MA, Prieto DA, Blonder J, Johann DJ Jr.

Methods Mol Biol. 2013;1002:71-83. doi: 10.1007/978-1-62703-360-2_6.

PMID:
23625395
14.

Optimal molecular profiling of tissue and tissue components: defining the best processing and microdissection methods for biomedical applications.

Rodriguez-Canales J, Hanson JC, Hipp JD, Balis UJ, Tangrea MA, Emmert-Buck MR, Bova GS.

Methods Mol Biol. 2013;980:61-120. doi: 10.1007/978-1-62703-287-2_5.

PMID:
23359150
15.

Three-dimensional mRNA measurements reveal minimal regional heterogeneity in esophageal squamous cell carcinoma.

Yan W, Shih J, Rodriguez-Canales J, Tangrea MA, Player A, Diao L, Hu N, Goldstein AM, Wang J, Taylor PR, Lippman SM, Wistuba II, Emmert-Buck MR, Erickson HS.

Am J Pathol. 2013 Feb;182(2):529-39. doi: 10.1016/j.ajpath.2012.10.028. Epub 2012 Dec 3.

16.

Semiautomated laser capture microdissection of lung adenocarcinoma cytology samples.

Roy Chowdhuri S, Hanson J, Cheng J, Rodriguez-Canales J, Fetsch P, Balis U, Filie AC, Giaccone G, Emmert-Buck MR, Hipp JD.

Acta Cytol. 2012;56(6):622-31. doi: 10.1159/000342984. Epub 2012 Nov 24.

17.

Integration of architectural and cytologic driven image algorithms for prostate adenocarcinoma identification.

Hipp J, Monaco J, Kunju LP, Cheng J, Yagi Y, Rodriguez-Canales J, Emmert-Buck MR, Hewitt S, Feldman MD, Tomaszewski JE, Toner M, Tompkins RG, Flotte T, Lucas D, Gilbertson JR, Madabhushi A, Balis U.

Anal Cell Pathol (Amst). 2012;35(4):251-65. doi: 10.3233/ACP-2012-0054.

18.

Identification of unique expression signatures and therapeutic targets in esophageal squamous cell carcinoma.

Yan W, Shih JH, Rodriguez-Canales J, Tangrea MA, Ylaya K, Hipp J, Player A, Hu N, Goldstein AM, Taylor PR, Emmert-Buck MR, Erickson HS.

BMC Res Notes. 2012 Jan 26;5:73. doi: 10.1186/1756-0500-5-73.

19.

Image microarrays (IMA): Digital pathology's missing tool.

Hipp J, Cheng J, Pantanowitz L, Hewitt S, Yagi Y, Monaco J, Madabhushi A, Rodriguez-Canales J, Hanson J, Roy-Chowdhuri S, Filie AC, Feldman MD, Tomaszewski JE, Shih NN, Brodsky V, Giaccone G, Emmert-Buck MR, Balis UJ.

J Pathol Inform. 2011;2:47. doi: 10.4103/2153-3539.86829. Epub 2011 Oct 29.

20.

A dynamic magnetic shift method to increase nanoparticle concentration in cancer metastases: a feasibility study using simulations on autopsy specimens.

Nacev A, Kim SH, Rodriguez-Canales J, Tangrea MA, Shapiro B, Emmert-Buck MR.

Int J Nanomedicine. 2011;6:2907-23. doi: 10.2147/IJN.S23724. Epub 2011 Nov 18.

21.

American journal of cancer research: editorial board (2011).

Antin JH, Aplin AE, Cheng SY, Emmert-Buck MR, Cryns VL, Wang D.

Am J Cancer Res. 2011;1(6):817-22. Epub 2011 Jun 28. No abstract available.

22.

Launching of American Journal of Cancer Research.

Antin JH, Emmert-Buck MR, Aplin AE, Cheng SY, Cryns VL, Wang D.

Am J Cancer Res. 2011;1(1):i. Epub 2010 Nov 5. No abstract available.

23.

Decrease in CD8+ lymphocyte number and altered cytokine profile in human prostate cancer.

Gannot G, Richardson AM, Rodriguez-Canales J, Pinto PA, Merino MJ, Chuaqui RF, Gillespie JW, Emmert-Buck MR.

Am J Cancer Res. 2011;1(1):120-127. Epub 2010 Nov 10.

24.

Squamous Cell Carcinoma - Similarities and Differences among Anatomical Sites.

Yan W, Wistuba II, Emmert-Buck MR, Erickson HS.

Am J Cancer Res. 2011 Jan 1;1(3):275-300.

25.

MicroRNA analysis of microdissected normal squamous esophageal epithelium and tumor cells.

Zhu L, Yan W, Rodriguez-Canales J, Rosenberg AM, Hu N, Goldstein AM, Taylor PR, Erickson HS, Emmert-Buck MR, Tangrea MA.

Am J Cancer Res. 2011;1(5):574-584.

26.

Immunoguided microdissection techniques.

Tangrea MA, Hanson JC, Bonner RF, Pohida TJ, Rodriguez-Canales J, Emmert-Buck MR.

Methods Mol Biol. 2011;755:57-66. doi: 10.1007/978-1-61779-163-5_4.

27.

Why is it crucial to reintegrate pathology into cancer research?

Rodriguez-Canales J, Eberle FC, Jaffe ES, Emmert-Buck MR.

Bioessays. 2011 Jul;33(7):490-8. doi: 10.1002/bies.201100017. Epub 2011 May 17.

PMID:
21590787
28.

SIVQ-aided laser capture microdissection: A tool for high-throughput expression profiling.

Hipp J, Cheng J, Hanson JC, Yan W, Taylor P, Hu N, Rodriguez-Canales J, Hipp J, Tangrea MA, Emmert-Buck MR, Balis U.

J Pathol Inform. 2011 Mar 31;2:19. doi: 10.4103/2153-3539.78500.

29.

Quantifying mRNA levels across tissue sections with 2D-RT-qPCR.

Armani M, Tangrea MA, Shapiro B, Emmert-Buck MR, Smela E.

Anal Bioanal Chem. 2011 Jul;400(10):3383-93. doi: 10.1007/s00216-011-5062-8. Epub 2011 May 11.

PMID:
21559756
30.

Digital slide repositories for publications: lessons learned from the microarray community.

Hipp JD, Lucas DR, Emmert-Buck MR, Compton CC, Balis UJ.

Am J Surg Pathol. 2011 Jun;35(6):783-6. doi: 10.1097/PAS.0b013e31821946b6. No abstract available.

PMID:
21552111
31.
32.

Methylation profiling of mediastinal gray zone lymphoma reveals a distinctive signature with elements shared by classical Hodgkin's lymphoma and primary mediastinal large B-cell lymphoma.

Eberle FC, Rodriguez-Canales J, Wei L, Hanson JC, Killian JK, Sun HW, Adams LG, Hewitt SM, Wilson WH, Pittaluga S, Meltzer PS, Staudt LM, Emmert-Buck MR, Jaffe ES.

Haematologica. 2011 Apr;96(4):558-66. doi: 10.3324/haematol.2010.033167.

33.

Effect of immunohistochemistry on molecular analysis of tissue samples: implications for microdissection technologies.

Tangrea MA, Mukherjee S, Gao B, Markey SP, Du Q, Armani M, Kreitman MS, Rosenberg AM, Wallis BS, Eberle FC, Duncan FC, Hanson JC, Chuaqui RF, Rodriguez-Canales J, Emmert-Buck MR.

J Histochem Cytochem. 2011 Jun;59(6):591-600. doi: 10.1369/0022155411404704. Epub 2011 Mar 23.

34.

Expression microdissection adapted to commercial laser dissection instruments.

Hanson JC, Tangrea MA, Kim S, Armani MD, Pohida TJ, Bonner RF, Rodriguez-Canales J, Emmert-Buck MR.

Nat Protoc. 2011 Apr;6(4):457-67. doi: 10.1038/nprot.2010.202. Epub 2011 Mar 18.

35.

Layered electrophoretic transfer - A method for pre-analytic processing of histological sections.

Zhu L, Tangrea MA, Mukherjee S, Emmert-Buck MR.

Proteomics. 2011 Mar;11(5):883-9. doi: 10.1002/pmic.201000476. Epub 2011 Jan 31.

36.

Increased matrix metalloproteinase activation in esophageal squamous cell carcinoma.

Mukherjee S, Roth MJ, Dawsey SM, Yan W, Rodriguez-Canales J, Erickson HS, Hu N, Goldstein AM, Taylor PR, Richardson AM, Tangrea MA, Chuaqui RF, Emmert-Buck MR.

J Transl Med. 2010 Oct 5;8:91. doi: 10.1186/1479-5876-8-91.

37.

Proteomic profiling of cancer--opportunities, challenges, and context.

Arnott D, Emmert-Buck MR.

J Pathol. 2010 Sep;222(1):16-20. doi: 10.1002/path.2750.

PMID:
20623483
38.

Influence of hypoxia induced by minimally invasive prostatectomy on gene expression: implications for biomarker analysis.

Erickson HS, Josephson JW, Vira M, Albert PS, Gillespie JW, Rodriguez-Canales J, Pinto PA, Chuaqui RF, Emmert-Buck MR, Coleman JA.

Am J Transl Res. 2010 Apr 10;2(3):210-22.

39.

Immunoguided laser assisted microdissection techniques for DNA methylation analysis of archival tissue specimens.

Eberle FC, Hanson JC, Killian JK, Wei L, Ylaya K, Hewitt SM, Jaffe ES, Emmert-Buck MR, Rodriguez-Canales J.

J Mol Diagn. 2010 Jul;12(4):394-401. doi: 10.2353/jmoldx.2010.090200. Epub 2010 Apr 22.

40.

2D-PCR: a method of mapping DNA in tissue sections.

Armani M, Rodriguez-Canales J, Gillespie J, Tangrea M, Erickson H, Emmert-Buck MR, Shapiro B, Smela E.

Lab Chip. 2009 Dec 21;9(24):3526-34. doi: 10.1039/b910807f. Epub 2009 Oct 12.

41.

High throughput screening of normal and neoplastic tissue samples.

Erickson HS, Gannot G, Tangrea MA, Chuaqui RF, Gillespie JW, Emmert-Buck MR.

Comb Chem High Throughput Screen. 2010 Mar;13(3):253-67. Review.

PMID:
20015016
42.

Identification of EpCAM as a molecular target of prostate cancer stroma.

Mukherjee S, Richardson AM, Rodriguez-Canales J, Ylaya K, Erickson HS, Player A, Kawasaki ES, Pinto PA, Choyke PL, Merino MJ, Albert PS, Chuaqui RF, Emmert-Buck MR.

Am J Pathol. 2009 Dec;175(6):2277-87. doi: 10.2353/ajpath.2009.090013. Epub 2009 Oct 22.

43.

Current molecular diagnostics of breast cancer and the potential incorporation of microRNA.

Zoon CK, Starker EQ, Wilson AM, Emmert-Buck MR, Libutti SK, Tangrea MA.

Expert Rev Mol Diagn. 2009 Jul;9(5):455-67. doi: 10.1586/erm.09.25. Review.

44.

Quantitative RT-PCR gene expression analysis of laser microdissected tissue samples.

Erickson HS, Albert PS, Gillespie JW, Rodriguez-Canales J, Marston Linehan W, Pinto PA, Chuaqui RF, Emmert-Buck MR.

Nat Protoc. 2009;4(6):902-22. doi: 10.1038/nprot.2009.61. Epub 2009 May 21.

45.

Large-scale profiling of archival lymph nodes reveals pervasive remodeling of the follicular lymphoma methylome.

Killian JK, Bilke S, Davis S, Walker RL, Killian MS, Jaeger EB, Chen Y, Hipp J, Pittaluga S, Raffeld M, Cornelison R, Smith WI Jr, Bibikova M, Fan JB, Emmert-Buck MR, Jaffe ES, Meltzer PS.

Cancer Res. 2009 Feb 1;69(3):758-64. doi: 10.1158/0008-5472.CAN-08-2984. Epub 2009 Jan 20.

46.

Quantitation of steroid hormones in thin fresh frozen tissue sections.

Blonder J, Johann DJ, Veenstra TD, Xiao Z, Emmert-Buck MR, Ziegler RG, Rodriguez-Canales J, Hanson JA, Xu X.

Anal Chem. 2008 Nov 15;80(22):8845-52. doi: 10.1021/ac801402a. Epub 2008 Oct 21.

PMID:
18937426
47.

Overexpression of CDC25B and LAMC2 mRNA and protein in esophageal squamous cell carcinomas and premalignant lesions in subjects from a high-risk population in China.

Shou JZ, Hu N, Takikita M, Roth MJ, Johnson LL, Giffen C, Wang QH, Wang C, Wang Y, Su H, Kong LH, Emmert-Buck MR, Goldstein AM, Hewitt SM, Taylor PR.

Cancer Epidemiol Biomarkers Prev. 2008 Jun;17(6):1424-35. doi: 10.1158/1055-9965.EPI-06-0666.

48.

Tissue microdissection.

Erickson HS, Gillespie JW, Emmert-Buck MR.

Methods Mol Biol. 2008;424:433-48. doi: 10.1007/978-1-60327-064-9_34. Review.

PMID:
18369881
49.

Quantitation of HER2 and telomerase biomarkers in solid tumors with IgY antibodies and nanocrystal detection.

Xiao Y, Gao X, Gannot G, Emmert-Buck MR, Srivastava S, Wagner PD, Amos MD, Barker PE.

Int J Cancer. 2008 May 15;122(10):2178-86. doi: 10.1002/ijc.23320.

50.

Global expression analysis of prostate cancer-associated stroma and epithelia.

Richardson AM, Woodson K, Wang Y, Rodriguez-Canales J, Erickson HS, Tangrea MA, Novakovic K, Gonzalez S, Velasco A, Kawasaki ES, Emmert-Buck MR, Chuaqui RF, Player A.

Diagn Mol Pathol. 2007 Dec;16(4):189-97.

PMID:
18043281

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