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Items: 1 to 50 of 96

1.

Evolution of gene expression levels in the male reproductive organs of Anopheles mosquitoes.

Izquierdo A, Fahrenberger M, Persampieri T, Benedict MQ, Giles T, Catteruccia F, Emes RD, Dottorini T.

Life Sci Alliance. 2019 Jan 2;2(1):e201800191. doi: 10.26508/lsa.201800191. eCollection 2019 Feb.

2.

Discrimination of contagious and environmental strains of Streptococcus uberis in dairy herds by means of mass spectrometry and machine-learning.

Esener N, Green MJ, Emes RD, Jowett B, Davies PL, Bradley AJ, Dottorini T.

Sci Rep. 2018 Nov 30;8(1):17517. doi: 10.1038/s41598-018-35867-6.

3.

Acute Toxoplasma Gondii Infection in Cats Induced Tissue-Specific Transcriptional Response Dominated by Immune Signatures.

Cong W, Dottorini T, Khan F, Emes RD, Zhang FK, Zhou CX, He JJ, Zhang XX, Elsheikha HM, Zhu XQ.

Front Immunol. 2018 Oct 19;9:2403. doi: 10.3389/fimmu.2018.02403. eCollection 2018.

4.

Paternal diet programs offspring health through sperm- and seminal plasma-specific pathways in mice.

Watkins AJ, Dias I, Tsuro H, Allen D, Emes RD, Moreton J, Wilson R, Ingram RJM, Sinclair KD.

Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):10064-10069. doi: 10.1073/pnas.1806333115. Epub 2018 Aug 27.

5.

Cancer reversion with oocyte extracts is mediated by cell cycle arrest and induction of tumour dormancy.

Saad N, Alberio R, Johnson AD, Emes RD, Giles TC, Clarke P, Grabowska AM, Allegrucci C.

Oncotarget. 2018 Mar 23;9(22):16008-16027. doi: 10.18632/oncotarget.24664. eCollection 2018 Mar 23.

6.

The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme for Dichelobacter nodosus.

Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S.

Front Microbiol. 2018 Mar 23;9:551. doi: 10.3389/fmicb.2018.00551. eCollection 2018.

7.

Opsonic Phagocytosis in Chronic Obstructive Pulmonary Disease Is Enhanced by Nrf2 Agonists.

Bewley MA, Budd RC, Ryan E, Cole J, Collini P, Marshall J, Kolsum U, Beech G, Emes RD, Tcherniaeva I, Berbers GAM, Walmsley SR, Donaldson G, Wedzicha JA, Kilty I, Rumsey W, Sanchez Y, Brightling CE, Donnelly LE, Barnes PJ, Singh D, Whyte MKB, Dockrell DH; COPDMAP.

Am J Respir Crit Care Med. 2018 Sep 15;198(6):739-750. doi: 10.1164/rccm.201705-0903OC.

8.

Identification of stable reference genes for quantitative PCR in koalas.

Sarker N, Fabijan J, Emes RD, Hemmatzadeh F, Meers J, Moreton J, Owen H, Seddon JM, Simmons G, Speight N, Trott D, Woolford L, Tarlinton RE.

Sci Rep. 2018 Feb 20;8(1):3364. doi: 10.1038/s41598-018-21723-0.

9.

HumanMethylation450K Array-Identified Biomarkers Predict Tumour Recurrence/Progression at Initial Diagnosis of High-risk Non-muscle Invasive Bladder Cancer.

Kitchen MO, Bryan RT, Emes RD, Luscombe CJ, Cheng KK, Zeegers MP, James ND, Gommersall LM, Fryer AA.

Biomark Cancer. 2018 Jan 8;10:1179299X17751920. doi: 10.1177/1179299X17751920. eCollection 2018.

10.

Complete Genome Sequences of Seven Vibrio cholerae Phages Isolated in China.

Bhandare SG, Warry A, Emes RD, Su J, Barrow PA, Atterbury RJ.

Genome Announc. 2017 Nov 22;5(47). pii: e01019-17. doi: 10.1128/genomeA.01019-17.

11.

Complete Genome Sequences of Vibrio cholerae-Specific Bacteriophages 24 and X29.

Bhandare SG, Warry A, Emes RD, Hooton SPT, Barrow PA, Atterbury RJ.

Genome Announc. 2017 Nov 16;5(46). pii: e01013-17. doi: 10.1128/genomeA.01013-17.

12.

A proteomic investigation into mechanisms underpinning corticosteroid effects on neural stem cells.

Al-Mayyahi RS, Sterio LD, Connolly JB, Adams CF, Al-Tumah WA, Sen J, Emes RD, Hart SR, Chari DM.

Mol Cell Neurosci. 2018 Jan;86:30-40. doi: 10.1016/j.mcn.2017.11.006. Epub 2017 Nov 9.

PMID:
29128319
13.

Evolution of complexity in the zebrafish synapse proteome.

Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG.

Nat Commun. 2017 Mar 2;8:14613. doi: 10.1038/ncomms14613.

14.

X-linked primary ciliary dyskinesia due to mutations in the cytoplasmic axonemal dynein assembly factor PIH1D3.

Olcese C, Patel MP, Shoemark A, Kiviluoto S, Legendre M, Williams HJ, Vaughan CK, Hayward J, Goldenberg A, Emes RD, Munye MM, Dyer L, Cahill T, Bevillard J, Gehrig C, Guipponi M, Chantot S, Duquesnoy P, Thomas L, Jeanson L, Copin B, Tamalet A, Thauvin-Robinet C, Papon JF, Garin A, Pin I, Vera G, Aurora P, Fassad MR, Jenkins L, Boustred C, Cullup T, Dixon M, Onoufriadis A, Bush A, Chung EM, Antonarakis SE, Loebinger MR, Wilson R, Armengot M, Escudier E, Hogg C; UK10K Rare Group, Amselem S, Sun Z, Bartoloni L, Blouin JL, Mitchison HM.

Nat Commun. 2017 Feb 8;8:14279. doi: 10.1038/ncomms14279.

15.

Correction: TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants.

Sulak M, Fong L, Mika K, Chigurupati S, Yon L, Mongan NP, Emes RD, Lynch VJ.

Elife. 2016 Dec 20;5. pii: e24307. doi: 10.7554/eLife.24307. No abstract available.

16.

Inferring Function from Homology.

Giles TC, Emes RD.

Methods Mol Biol. 2017;1526:23-40.

PMID:
27896734
17.

DNA methylation at diagnosis is associated with response to disease-modifying drugs in early rheumatoid arthritis.

Glossop JR, Nixon NB, Emes RD, Sim J, Packham JC, Mattey DL, Farrell WE, Fryer AA.

Epigenomics. 2017 Apr;9(4):419-428. doi: 10.2217/epi-2016-0042. Epub 2016 Nov 25.

PMID:
27885849
18.
19.

A Trematode Parasite Derived Growth Factor Binds and Exerts Influences on Host Immune Functions via Host Cytokine Receptor Complexes.

Sulaiman AA, Zolnierczyk K, Japa O, Owen JP, Maddison BC, Emes RD, Hodgkinson JE, Gough KC, Flynn RJ.

PLoS Pathog. 2016 Nov 2;12(11):e1005991. doi: 10.1371/journal.ppat.1005991. eCollection 2016 Nov.

20.

TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants.

Sulak M, Fong L, Mika K, Chigurupati S, Yon L, Mongan NP, Emes RD, Lynch VJ.

Elife. 2016 Sep 19;5. pii: e11994. doi: 10.7554/eLife.11994. Erratum in: Elife. 2016 Dec 20;5:.

21.

Mapping B-cell responses to Salmonella enterica serovars Typhimurium and Enteritidis in chickens for the discrimination of infected from vaccinated animals.

Naqid IA, Owen JP, Maddison BC, Spiliotopoulos A, Emes RD, Warry A, Flynn RJ, Martelli F, Gosling RJ, Davies RH, La Ragione RM, Gough KC.

Sci Rep. 2016 Aug 11;6:31186. doi: 10.1038/srep31186.

22.

RNA expression of TLR10 in normal equine tissues.

Tarlinton RE, Alder L, Moreton J, Maboni G, Emes RD, Tötemeyer S.

BMC Res Notes. 2016 Jul 19;9:353. doi: 10.1186/s13104-016-2161-9.

23.

Mitochondrial phosphoenolpyruvate carboxykinase (PEPCK-M) and serine biosynthetic pathway genes are co-ordinately increased during anabolic agent-induced skeletal muscle growth.

Brown DM, Williams H, Ryan KJ, Wilson TL, Daniel ZC, Mareko MH, Emes RD, Harris DW, Jones S, Wattis JA, Dryden IL, Hodgman TC, Brameld JM, Parr T.

Sci Rep. 2016 Jun 28;6:28693. doi: 10.1038/srep28693.

24.

Mapping polyclonal antibody responses to bacterial infection using next generation phage display.

Naqid IA, Owen JP, Maddison BC, Spiliotopoulos A, Emes RD, Warry A, Tchórzewska MA, Martelli F, Gosling RJ, Davies RH, La Ragione RM, Gough KC.

Sci Rep. 2016 Apr 13;6:24232. doi: 10.1038/srep24232.

25.

Maternal genome-wide DNA methylation profiling in gestational diabetes shows distinctive disease-associated changes relative to matched healthy pregnancies.

Wu P, Farrell WE, Haworth KE, Emes RD, Kitchen MO, Glossop JR, Hanna FW, Fryer AA.

Epigenetics. 2018;13(2):122-128. doi: 10.1080/15592294.2016.1166321. Epub 2018 Jan 25.

26.

Quantitative genome-wide methylation analysis of high-grade non-muscle invasive bladder cancer.

Kitchen MO, Bryan RT, Emes RD, Glossop JR, Luscombe C, Cheng KK, Zeegers MP, James ND, Devall AJ, Mein CA, Gommersall L, Fryer AA, Farrell WE.

Epigenetics. 2016 Mar 3;11(3):237-46. doi: 10.1080/15592294.2016.1154246. Epub 2016 Mar 1.

27.

Assembly, Assessment, and Availability of De novo Generated Eukaryotic Transcriptomes.

Moreton J, Izquierdo A, Emes RD.

Front Genet. 2016 Jan 11;6:361. doi: 10.3389/fgene.2015.00361. eCollection 2015. Review.

28.

Clinical research: developing an appropriate career structure.

Mellanby RJ, Price J, Wooldridge L, Jonsson NN, Clegg PD, Emes RD, England G, Corr SA, Piercy RJ, Mulcahy G, Wood JL, Walker BR, Argyle DJ.

Vet Rec. 2015 Nov 28;177(21):544-7. doi: 10.1136/vr.h6169. No abstract available.

PMID:
26612910
29.

Genome-wide profiling in treatment-naive early rheumatoid arthritis reveals DNA methylome changes in T and B lymphocytes.

Glossop JR, Emes RD, Nixon NB, Packham JC, Fryer AA, Mattey DL, Farrell WE.

Epigenomics. 2016 Feb;8(2):209-24. doi: 10.2217/epi.15.103. Epub 2015 Nov 10.

PMID:
26556652
30.

Molecular Epidemiology of Streptococcus uberis Clinical Mastitis in Dairy Herds: Strain Heterogeneity and Transmission.

Davies PL, Leigh JA, Bradley AJ, Archer SC, Emes RD, Green MJ.

J Clin Microbiol. 2016 Jan;54(1):68-74. doi: 10.1128/JCM.01583-15. Epub 2015 Oct 21.

31.

Methylation of HOXA9 and ISL1 Predicts Patient Outcome in High-Grade Non-Invasive Bladder Cancer.

Kitchen MO, Bryan RT, Haworth KE, Emes RD, Luscombe C, Gommersall L, Cheng KK, Zeegers MP, James ND, Devall AJ, Fryer AA, Farrell WE.

PLoS One. 2015 Sep 2;10(9):e0137003. doi: 10.1371/journal.pone.0137003. eCollection 2015.

32.

DNA methylation profiling of synovial fluid FLS in rheumatoid arthritis reveals changes common with tissue-derived FLS.

Glossop JR, Haworth KE, Emes RD, Nixon NB, Packham JC, Dawes PT, Fryer AA, Mattey DL, Farrell WE.

Epigenomics. 2015;7(4):539-51. doi: 10.2217/epi.15.15.

PMID:
26111028
33.

Transposon insertion mapping with PIMMS - Pragmatic Insertional Mutation Mapping System.

Blanchard AM, Leigh JA, Egan SA, Emes RD.

Front Genet. 2015 Apr 9;6:139. doi: 10.3389/fgene.2015.00139. eCollection 2015.

34.

Virulence related sequences; insights provided by comparative genomics of Streptococcus uberis of differing virulence.

Hossain M, Egan SA, Coffey T, Ward PN, Wilson R, Leigh JA, Emes RD.

BMC Genomics. 2015 Apr 23;16:334. doi: 10.1186/s12864-015-1512-6.

35.

A novel member of the let-7 microRNA family is associated with developmental transitions in filarial nematode parasites.

Winter AD, Gillan V, Maitland K, Emes RD, Roberts B, McCormack G, Weir W, Protasio AV, Holroyd N, Berriman M, Britton C, Devaney E.

BMC Genomics. 2015 Apr 22;16:331. doi: 10.1186/s12864-015-1536-y.

36.

TGF-β superfamily members from the helminth Fasciola hepatica show intrinsic effects on viability and development.

Japa O, Hodgkinson JE, Emes RD, Flynn RJ.

Vet Res. 2015 Mar 11;46:29. doi: 10.1186/s13567-015-0167-2.

37.

A predictive model for canine dilated cardiomyopathy-a meta-analysis of Doberman Pinscher data.

Simpson S, Edwards J, Emes RD, Cobb MA, Mongan NP, Rutland CS.

PeerJ. 2015 Mar 26;3:e842. doi: 10.7717/peerj.842. eCollection 2015.

38.

Epidrug mediated re-expression of miRNA targeting the HMGA transcripts in pituitary cells.

Kitchen MO, Yacqub-Usman K, Emes RD, Richardson A, Clayton RN, Farrell WE.

Pituitary. 2015 Oct;18(5):674-84. doi: 10.1007/s11102-014-0630-5.

PMID:
25557289
39.

Methylation of the FGFR2 gene is associated with high birth weight centile in humans.

Haworth KE, Farrell WE, Emes RD, Ismail KM, Carroll WD, Hubball E, Rooney A, Yates AM, Mein C, Fryer AA.

Epigenomics. 2014;6(5):477-91. doi: 10.2217/epi.14.40. Review.

PMID:
25431941
40.

Homopolymer tract organization in the human malarial parasite Plasmodium falciparum and related Apicomplexan parasites.

Russell K, Cheng CH, Bizzaro JW, Ponts N, Emes RD, Le Roch K, Marx KA, Horrocks P.

BMC Genomics. 2014 Oct 3;15:848. doi: 10.1186/1471-2164-15-848.

41.

Genome-wide DNA methylation profiling in rheumatoid arthritis identifies disease-associated methylation changes that are distinct to individual T- and B-lymphocyte populations.

Glossop JR, Emes RD, Nixon NB, Haworth KE, Packham JC, Dawes PT, Fryer AA, Mattey DL, Farrell WE.

Epigenetics. 2014 Sep;9(9):1228-37. doi: 10.4161/epi.29718. Epub 2014 Jul 7.

42.

Multiple groups of endogenous epsilon-like retroviruses conserved across primates.

Brown K, Emes RD, Tarlinton RE.

J Virol. 2014 Nov;88(21):12464-71. doi: 10.1128/JVI.00966-14. Epub 2014 Aug 20.

43.

A consensus approach to vertebrate de novo transcriptome assembly from RNA-seq data: assembly of the duck (Anas platyrhynchos) transcriptome.

Moreton J, Dunham SP, Emes RD.

Front Genet. 2014 Jun 25;5:190. doi: 10.3389/fgene.2014.00190. eCollection 2014.

44.

Characterisation of the horse transcriptome from immunologically active tissues.

Moreton J, Malla S, Aboobaker AA, Tarlinton RE, Emes RD.

PeerJ. 2014 May 6;2:e382. doi: 10.7717/peerj.382. eCollection 2014.

45.

The A2 gene of alcelaphine herpesvirus-1 is a transcriptional regulator affecting cytotoxicity in virus-infected T cells but is not required for malignant catarrhal fever induction in rabbits.

Parameswaran N, Dewals BG, Giles TC, Deppmann C, Blythe M, Vanderplasschen A, Emes RD, Haig D.

Virus Res. 2014 Aug 8;188:68-80. doi: 10.1016/j.virusres.2014.04.003. Epub 2014 Apr 13.

46.

Molecular characterization of adipose tissue in the African elephant (Loxodonta africana).

Nilsson EM, Fainberg HP, Choong SS, Giles TC, Sells J, May S, Stansfield FJ, Allen WR, Emes RD, Mostyn A, Mongan NP, Yon L.

PLoS One. 2014 Mar 14;9(3):e91717. doi: 10.1371/journal.pone.0091717. eCollection 2014.

47.

Novel ovine polymorphisms and adaptive evolution in mammalian TLR2 suggest existence of multiple pathogen binding regions.

Smith SA, Haig D, Emes RD.

Gene. 2014 May 1;540(2):217-25. doi: 10.1016/j.gene.2014.02.032. Epub 2014 Feb 26.

48.

Targeted NGS gene panel identifies mutations in RSPH1 causing primary ciliary dyskinesia and a common mechanism for ciliary central pair agenesis due to radial spoke defects.

Onoufriadis A, Shoemark A, Schmidts M, Patel M, Jimenez G, Liu H, Thomas B, Dixon M, Hirst RA, Rutman A, Burgoyne T, Williams C, Scully J, Bolard F, Lafitte JJ, Beales PL, Hogg C, Yang P, Chung EM, Emes RD, O'Callaghan C; UK10K, Bouvagnet P, Mitchison HM.

Hum Mol Genet. 2014 Jul 1;23(13):3362-74. doi: 10.1093/hmg/ddu046. Epub 2014 Feb 11.

49.

Combined exome and whole-genome sequencing identifies mutations in ARMC4 as a cause of primary ciliary dyskinesia with defects in the outer dynein arm.

Onoufriadis A, Shoemark A, Munye MM, James CT, Schmidts M, Patel M, Rosser EM, Bacchelli C, Beales PL, Scambler PJ, Hart SL, Danke-Roelse JE, Sloper JJ, Hull S, Hogg C, Emes RD, Pals G, Moore AT, Chung EM; UK10K, Mitchison HM.

J Med Genet. 2014 Jan;51(1):61-7. doi: 10.1136/jmedgenet-2013-101938. Epub 2013 Nov 7.

50.

Mutations in the gene encoding IFT dynein complex component WDR34 cause Jeune asphyxiating thoracic dystrophy.

Schmidts M, Vodopiutz J, Christou-Savina S, Cortés CR, McInerney-Leo AM, Emes RD, Arts HH, Tüysüz B, D'Silva J, Leo PJ, Giles TC, Oud MM, Harris JA, Koopmans M, Marshall M, Elçioglu N, Kuechler A, Bockenhauer D, Moore AT, Wilson LC, Janecke AR, Hurles ME, Emmet W, Gardiner B, Streubel B, Dopita B, Zankl A, Kayserili H, Scambler PJ, Brown MA, Beales PL, Wicking C; UK10K, Duncan EL, Mitchison HM.

Am J Hum Genet. 2013 Nov 7;93(5):932-44. doi: 10.1016/j.ajhg.2013.10.003. Epub 2013 Oct 31.

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