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Items: 1 to 50 of 85

1.

Climate drives community-wide divergence within species over a limited spatial scale: evidence from an oceanic island.

Salces-Castellano A, Patiño J, Alvarez N, Andújar C, Arribas P, Braojos-Ruiz JJ, Del Arco-Aguilar M, García-Olivares V, Karger DN, López H, Manolopoulou I, Oromí P, Pérez-Delgado AJ, Peterman WE, Rijsdijk KF, Emerson BC.

Ecol Lett. 2020 Feb;23(2):305-315. doi: 10.1111/ele.13433. Epub 2019 Nov 25.

PMID:
31762170
2.

Mitochondrial metagenomics reveals the ancient origin and phylodiversity of soil mites and provides a phylogeny of the Acari.

Arribas P, Andújar C, Moraza ML, Linard B, Emerson BC, Vogler AP.

Mol Biol Evol. 2019 Oct 31. pii: msz255. doi: 10.1093/molbev/msz255. [Epub ahead of print]

PMID:
31670799
3.

Dispersal limitation: Evolutionary origins and consequences in arthropods.

Emerson BC, Salces-Castellano A, Arribas P.

Mol Ecol. 2019 Jul;28(13):3137-3140. doi: 10.1111/mec.15152. Epub 2019 Jul 16.

PMID:
31313423
4.

Genomic signatures accompanying the dietary shift to phytophagy in polyphagan beetles.

Seppey M, Ioannidis P, Emerson BC, Pitteloud C, Robinson-Rechavi M, Roux J, Escalona HE, McKenna DD, Misof B, Shin S, Zhou X, Waterhouse RM, Alvarez N.

Genome Biol. 2019 May 17;20(1):98. doi: 10.1186/s13059-019-1704-5.

5.

Introgressive hybridization in a Spiny-Tailed Iguana, Ctenosaura pectinata, and its implications for taxonomy and conservation.

Zarza E, Reynoso VH, Faria CMA, Emerson BC.

PeerJ. 2019 Apr 23;7:e6744. doi: 10.7717/peerj.6744. eCollection 2019.

6.

Evolution of host plant use and diversification in a species complex of parasitic weevils (Coleoptera: Curculionidae).

Hernández-Vera G, Toševski I, Caldara R, Emerson BC.

PeerJ. 2019 Mar 20;7:e6625. doi: 10.7717/peerj.6625. eCollection 2019.

7.

Babies, Bathwater, and Straw Men? Not Quite: A Response to Meiri et al.

Emerson BC, Patiño J.

Trends Ecol Evol. 2018 Dec;33(12):896-897. doi: 10.1016/j.tree.2018.09.004. Epub 2018 Sep 25. No abstract available.

PMID:
30266243
8.

Why the COI barcode should be the community DNA metabarcode for the metazoa.

Andújar C, Arribas P, Yu DW, Vogler AP, Emerson BC.

Mol Ecol. 2018 Oct;27(20):3968-3975. doi: 10.1111/mec.14844. Epub 2018 Sep 17.

9.

Anagenesis, Cladogenesis, and Speciation on Islands.

Emerson BC, Patiño J.

Trends Ecol Evol. 2018 Jul;33(7):488-491. doi: 10.1016/j.tree.2018.04.006. Epub 2018 May 3.

PMID:
29731151
10.

Long-term in situ persistence of biodiversity in tropical sky islands revealed by landscape genomics.

Mastretta-Yanes A, Xue AT, Moreno-Letelier A, Jorgensen TH, Alvarez N, Piñero D, Emerson BC.

Mol Ecol. 2018 Jan;27(2):432-448. doi: 10.1111/mec.14461. Epub 2018 Jan 16.

PMID:
29226496
11.

Connecting Earth observation to high-throughput biodiversity data.

Bush A, Sollmann R, Wilting A, Bohmann K, Cole B, Balzter H, Martius C, Zlinszky A, Calvignac-Spencer S, Cobbold CA, Dawson TP, Emerson BC, Ferrier S, Gilbert MTP, Herold M, Jones L, Leendertz FH, Matthews L, Millington JDA, Olson JR, Ovaskainen O, Raffaelli D, Reeve R, Rödel MO, Rodgers TW, Snape S, Visseren-Hamakers I, Vogler AP, White PCL, Wooster MJ, Yu DW.

Nat Ecol Evol. 2017 Jun 22;1(7):176. doi: 10.1038/s41559-017-0176.

12.

Assessing the potential of RAD-sequencing to resolve phylogenetic relationships within species radiations: The fly genus Chiastocheta (Diptera: Anthomyiidae) as a case study.

Suchan T, Espíndola A, Rutschmann S, Emerson BC, Gori K, Dessimoz C, Arrigo N, Ronikier M, Alvarez N.

Mol Phylogenet Evol. 2017 Sep;114:189-198. doi: 10.1016/j.ympev.2017.06.012. Epub 2017 Jun 21.

PMID:
28645767
13.

Cryptic diversity in the Azorean beetle genus <i>Tarphius</i> Erichson, 1845 (Coleoptera: Zopheridae): An integrative taxonomic approach with description of four new species.

Borges PA, Amorim IR, Terzopoulou S, Rigal F, Emerson BC, Serrano AR.

Zootaxa. 2017 Feb 23;4236(3):zootaxa.4236.3.1. doi: 10.11646/zootaxa.4236.3.1.

PMID:
28264311
14.

MtDNA metagenomics reveals large-scale invasion of belowground arthropod communities by introduced species.

Cicconardi F, Borges PAV, Strasberg D, Oromí P, López H, Pérez-Delgado AJ, Casquet J, Caujapé-Castells J, Fernández-Palacios JM, Thébaud C, Emerson BC.

Mol Ecol. 2017 Jun;26(12):3104-3115. doi: 10.1111/mec.14037. Epub 2017 Mar 6.

PMID:
28139037
15.

Comment on Rieux and Balloux: calibration from tip-dating can compromise topological accuracy and evolutionary inference.

Emerson BC, Alvarado-Serrano DF, Hickerson MJ.

Mol Ecol. 2017 May;26(10):2623-2624. doi: 10.1111/mec.13951. Epub 2016 Dec 31.

PMID:
28039963
16.

A combined field survey and molecular identification protocol for comparing forest arthropod biodiversity across spatial scales.

Emerson BC, Casquet J, López H, Cardoso P, Borges PAV, Mollaret N, Oromí P, Strasberg D, Thébaud C.

Mol Ecol Resour. 2017 Jul;17(4):694-707. doi: 10.1111/1755-0998.12617. Epub 2016 Nov 20.

PMID:
27768248
17.

ddradseqtools: a software package for in silico simulation and testing of double-digest RADseq experiments.

Mora-Márquez F, García-Olivares V, Emerson BC, López de Heredia U.

Mol Ecol Resour. 2017 Mar;17(2):230-246. doi: 10.1111/1755-0998.12550. Epub 2016 Jul 12.

PMID:
27288885
18.

Post-copulatory opportunities for sperm competition and cryptic female choice provide no offspring fitness benefits in externally fertilizing salmon.

Lumley AJ, Diamond SE, Einum S, Yeates SE, Peruffo D, Emerson BC, Gage MJ.

R Soc Open Sci. 2016 Mar 2;3(3):150709. doi: 10.1098/rsos.150709. eCollection 2016 Mar.

19.

Model misspecification confounds the estimation of rates and exaggerates their time dependency.

Emerson BC, Alvarado-Serrano DF, Hickerson MJ.

Mol Ecol. 2015 Dec;24(24):6013-20. doi: 10.1111/mec.13451.

PMID:
26769403
20.

Lack of support for Rensch's rule in an intraspecific test using red flour beetle (Tribolium castaneum) populations.

Martin OY, Michalczyk Ł, Millard AL, Emerson BC, Gage MJ.

Insect Sci. 2017 Feb;24(1):133-140. doi: 10.1111/1744-7917.12272. Epub 2015 Dec 28.

PMID:
26299521
21.

Sexual selection protects against extinction.

Lumley AJ, Michalczyk Ł, Kitson JJ, Spurgin LG, Morrison CA, Godwin JL, Dickinson ME, Martin OY, Emerson BC, Chapman T, Gage MJ.

Nature. 2015 Jun 25;522(7557):470-3. doi: 10.1038/nature14419. Epub 2015 May 18.

PMID:
25985178
22.

Lack of support for the time-dependent molecular evolution hypothesis.

Emerson BC, Hickerson MJ.

Mol Ecol. 2015 Feb;24(4):702-9. doi: 10.1111/mec.13070.

PMID:
25640964
23.

Islands as model systems in ecology and evolution: prospects fifty years after MacArthur-Wilson.

Warren BH, Simberloff D, Ricklefs RE, Aguilée R, Condamine FL, Gravel D, Morlon H, Mouquet N, Rosindell J, Casquet J, Conti E, Cornuault J, Fernández-Palacios JM, Hengl T, Norder SJ, Rijsdijk KF, Sanmartín I, Strasberg D, Triantis KA, Valente LM, Whittaker RJ, Gillespie RG, Emerson BC, Thébaud C.

Ecol Lett. 2015 Feb;18(2):200-17. doi: 10.1111/ele.12398. Epub 2015 Jan 6. Review.

PMID:
25560682
24.

Fission and fusion in island taxa--serendipity, or something to be expected?

Emerson BC, Faria CM.

Mol Ecol. 2014 Nov;23(21):5132-4. doi: 10.1111/mec.12951.

PMID:
25330853
25.

Gene duplication, population genomics, and species-level differentiation within a tropical mountain shrub.

Mastretta-Yanes A, Zamudio S, Jorgensen TH, Arrigo N, Alvarez N, Piñero D, Emerson BC.

Genome Biol Evol. 2014 Sep 14;6(10):2611-24. doi: 10.1093/gbe/evu205.

26.

Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference.

Mastretta-Yanes A, Arrigo N, Alvarez N, Jorgensen TH, Piñero D, Emerson BC.

Mol Ecol Resour. 2015 Jan;15(1):28-41. doi: 10.1111/1755-0998.12291. Epub 2014 Jul 3.

PMID:
24916682
27.

Bulk de novo mitogenome assembly from pooled total DNA elucidates the phylogeny of weevils (Coleoptera: Curculionoidea).

Gillett CP, Crampton-Platt A, Timmermans MJ, Jordal BH, Emerson BC, Vogler AP.

Mol Biol Evol. 2014 Aug;31(8):2223-37. doi: 10.1093/molbev/msu154. Epub 2014 May 6.

28.

Signatures of volcanism and aridity in the evolution of an insular pine (Pinus canariensis Chr. Sm. Ex DC in Buch).

López de Heredia U, López R, Collada C, Emerson BC, Gil L.

Heredity (Edinb). 2014 Sep;113(3):240-9. doi: 10.1038/hdy.2014.22. Epub 2014 Mar 12.

29.

Cryptic choice of conspecific sperm controlled by the impact of ovarian fluid on sperm swimming behavior.

Yeates SE, Diamond SE, Einum S, Emerson BC, Holt WV, Gage MJ.

Evolution. 2013 Dec;67(12):3523-36. doi: 10.1111/evo.12208. Epub 2013 Aug 12.

30.

Molecular characterization of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus).

Kitson JJ, Warren BH, Florens FB, Baider C, Strasberg D, Emerson BC.

Mol Ecol. 2013 Nov;22(21):5441-55. doi: 10.1111/mec.12477. Epub 2013 Sep 24.

PMID:
24112379
31.

Collembola, the biological species concept and the underestimation of global species richness.

Cicconardi F, Fanciulli PP, Emerson BC.

Mol Ecol. 2013 Nov;22(21):5382-96. doi: 10.1111/mec.12472. Epub 2013 Oct 1.

PMID:
24112308
32.

Cryptic or mystic? Glacial tree refugia in northern Europe.

Tzedakis PC, Emerson BC, Hewitt GM.

Trends Ecol Evol. 2013 Dec;28(12):696-704. doi: 10.1016/j.tree.2013.09.001. Epub 2013 Sep 30. Review.

33.

Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding.

Ji Y, Ashton L, Pedley SM, Edwards DP, Tang Y, Nakamura A, Kitching R, Dolman PM, Woodcock P, Edwards FA, Larsen TH, Hsu WW, Benedick S, Hamer KC, Wilcove DS, Bruce C, Wang X, Levi T, Lott M, Emerson BC, Yu DW.

Ecol Lett. 2013 Oct;16(10):1245-57. doi: 10.1111/ele.12162. Epub 2013 Aug 4.

34.

Vulnerability to cavitation, hydraulic efficiency, growth and survival in an insular pine (Pinus canariensis).

López R, López de Heredia U, Collada C, Cano FJ, Emerson BC, Cochard H, Gil L.

Ann Bot. 2013 Jun;111(6):1167-79. doi: 10.1093/aob/mct084. Epub 2013 May 3.

35.

A road map for molecular ecology.

Andrew RL, Bernatchez L, Bonin A, Buerkle CA, Carstens BC, Emerson BC, Garant D, Giraud T, Kane NC, Rogers SM, Slate J, Smith H, Sork VL, Stone GN, Vines TH, Waits L, Widmer A, Rieseberg LH.

Mol Ecol. 2013 May;22(10):2605-26. doi: 10.1111/mec.12319. Review.

PMID:
23611646
36.

The imprint of geologic history on within-island diversification of woodlouse-hunter spiders (Araneae, Dysderidae) in the Canary Islands.

Macías-Hernández N, Bidegaray-Batista L, Emerson BC, Oromí P, Arnedo M.

J Hered. 2013 May-Jun;104(3):341-56. doi: 10.1093/jhered/est008. Epub 2013 Mar 12.

PMID:
23482634
37.

PyroClean: denoising pyrosequences from protein-coding amplicons for the recovery of interspecific and intraspecific genetic variation.

Ramirez-Gonzalez R, Yu DW, Bruce C, Heavens D, Caccamo M, Emerson BC.

PLoS One. 2013;8(3):e57615. doi: 10.1371/journal.pone.0057615. Epub 2013 Mar 1.

38.

A Bayesian approach to phylogeographic clustering.

Manolopoulou I, Legarreta L, Emerson BC, Brooks S, Tavaré S.

Interface Focus. 2011 Dec 6;1(6):909-21. doi: 10.1098/rsfs.2011.0054. Epub 2011 Oct 5.

39.

Phylogeographic ancestral inference using the coalescent model on haplotype trees.

Manolopoulou I, Emerson BC.

J Comput Biol. 2012 Jun;19(6):745-55. doi: 10.1089/cmb.2012.0038.

PMID:
22697244
40.

Numts help to reconstruct the demographic history of the ocellated lizard (Lacerta lepida) in a secondary contact zone.

Miraldo A, Hewitt GM, Dear PH, Paulo OS, Emerson BC.

Mol Ecol. 2012 Feb;21(4):1005-18. doi: 10.1111/j.1365-294X.2011.05422.x. Epub 2012 Jan 4.

PMID:
22221514
41.

Gene conversion rapidly generates major histocompatibility complex diversity in recently founded bird populations.

Spurgin LG, van Oosterhout C, Illera JC, Bridgett S, Gharbi K, Emerson BC, Richardson DS.

Mol Ecol. 2011 Dec;20(24):5213-25. doi: 10.1111/j.1365-294X.2011.05367.x. Epub 2011 Nov 22.

PMID:
22106868
42.

Inbreeding promotes female promiscuity.

Michalczyk Ł, Millard AL, Martin OY, Lumley AJ, Emerson BC, Chapman T, Gage MJ.

Science. 2011 Sep 23;333(6050):1739-42. doi: 10.1126/science.1207314.

43.

Phylogeny, phylogeography, phylobetadiversity and the molecular analysis of biological communities.

Emerson BC, Cicconardi F, Fanciulli PP, Shaw PJ.

Philos Trans R Soc Lond B Biol Sci. 2011 Aug 27;366(1576):2391-402. doi: 10.1098/rstb.2011.0057. Review.

44.

Searching for speciation genes: molecular evidence for selection associated with colour morphotypes in the Caribbean reef fish genus Hypoplectrus.

Holt BG, Côté IM, Emerson BC.

PLoS One. 2011;6(6):e20394. doi: 10.1371/journal.pone.0020394. Epub 2011 Jun 8.

45.

Phylogeography and demographic history of Lacerta lepida in the Iberian Peninsula: multiple refugia, range expansions and secondary contact zones.

Miraldo A, Hewitt GM, Paulo OS, Emerson BC.

BMC Evol Biol. 2011 Jun 17;11:170. doi: 10.1186/1471-2148-11-170.

46.

Combining contemporary and ancient DNA in population genetic and phylogeographical studies.

Navascués M, Depaulis F, Emerson BC.

Mol Ecol Resour. 2010 Sep;10(5):760-72. doi: 10.1111/j.1755-0998.2010.02895.x. Epub 2010 Jul 8.

PMID:
21565088
47.

Experimental evolution exposes female and male responses to sexual selection and conflict in Tribolium castaneum.

Michalczyk Ł, Millard AL, Martin OY, Lumley AJ, Emerson BC, Gage MJ.

Evolution. 2011 Mar;65(3):713-24. doi: 10.1111/j.1558-5646.2010.01174.x. Epub 2010 Nov 23.

PMID:
21091981
48.

Inbreeding depresses sperm competitiveness, but not fertilization or mating success in male Tribolium castaneum.

Michalczyk L, Martin OY, Millard AL, Emerson BC, Gage MJ.

Proc Biol Sci. 2010 Nov 22;277(1699):3483-91. doi: 10.1098/rspb.2010.0514. Epub 2010 Jun 16.

49.

Host-associated genetic differentiation in a seed parasitic weevil Rhinusa antirrhini (Coleptera: Curculionidae) revealed by mitochondrial and nuclear sequence data.

Hernández-Vera G, Mitrović M, Jović J, Tosevski I, Caldara R, Gassmann A, Emerson BC.

Mol Ecol. 2010 Jun;19(11):2286-300. doi: 10.1111/j.1365-294X.2010.04639.x. Epub 2010 May 4.

PMID:
20465586
50.

Distinguishing between hot-spots and melting-pots of genetic diversity using haplotype connectivity.

Nguyen B, Spillner A, Emerson BC, Moulton V.

Algorithms Mol Biol. 2010 Mar 20;5:19. doi: 10.1186/1748-7188-5-19.

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