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Items: 1 to 50 of 144

1.

Resonance Raman Characterization of Tetracene Monomer and Nanocrystals: Excited State Lattice Distortions With Implications For Efficient Singlet Fission.

Ellis SR, Dietze DR, Rangel T, Brown-Altvater F, Neaton JB, Mathies RA.

J Phys Chem A. 2019 May 2;123(17):3863-3875. doi: 10.1021/acs.jpca.9b02986. Epub 2019 Apr 23.

PMID:
30952191
2.

Three-Dimensional Mass Spectrometry Imaging Identifies Lipid Markers of Medulloblastoma Metastasis.

Paine MRL, Liu J, Huang D, Ellis SR, Trede D, Kobarg JH, Heeren RMA, Fernández FM, MacDonald TJ.

Sci Rep. 2019 Feb 18;9(1):2205. doi: 10.1038/s41598-018-38257-0.

3.

Rapid Identification of Ischemic Injury in Renal Tissue by Mass-Spectrometry Imaging.

van Smaalen TC, Ellis SR, Mascini NE, Siegel TP, Cillero-Pastor B, Hillen LM, van Heurn LWE, Peutz-Kootstra CJ, Heeren RMA.

Anal Chem. 2019 Mar 5;91(5):3575-3581. doi: 10.1021/acs.analchem.8b05521. Epub 2019 Feb 15.

PMID:
30702282
4.

Rare ribosomopathies: insights into mechanisms of cancer.

Aspesi A, Ellis SR.

Nat Rev Cancer. 2019 Apr;19(4):228-238. doi: 10.1038/s41568-019-0105-0. Review.

PMID:
30670820
5.

Increased throughput and ultra-high mass resolution in DESI FT-ICR MS imaging through new-generation external data acquisition system and advanced data processing approaches.

Kooijman PC, Nagornov KO, Kozhinov AN, Kilgour DPA, Tsybin YO, Heeren RMA, Ellis SR.

Sci Rep. 2019 Jan 9;9(1):8. doi: 10.1038/s41598-018-36957-1.

6.

Reshaping Lipid Biochemistry by Pushing Barriers in Structural Lipidomics.

Porta Siegel T, Ekroos K, Ellis SR.

Angew Chem Int Ed Engl. 2019 May 13;58(20):6492-6501. doi: 10.1002/anie.201812698. Epub 2019 Feb 18. Review.

PMID:
30601602
7.

Author Correction: Lymphoblastoid cell lines from Diamond Blackfan anaemia patients exhibit a full ribosomal stress phenotype that is rescued by gene therapy.

Aspesi A, Monteleone V, Betti M, Actis C, Morleo G, Sculco M, Guarrera S, Wlodarski MW, Ramenghi U, Santoro C, Ellis SR, Loreni F, Follenzi A, Dianzani I.

Sci Rep. 2018 Nov 16;8(1):17227. doi: 10.1038/s41598-018-35522-0.

8.

Understanding Detrimental and Beneficial Grain Boundary Effects in Halide Perovskites.

Adhyaksa GWP, Brittman S, Āboliņš H, Lof A, Li X, Keelor JD, Luo Y, Duevski T, Heeren RMA, Ellis SR, Fenning DP, Garnett EC.

Adv Mater. 2018 Dec;30(52):e1804792. doi: 10.1002/adma.201804792. Epub 2018 Oct 26.

PMID:
30368936
9.

Targeted Drug and Metabolite Imaging: Desorption Electrospray Ionization Combined with Triple Quadrupole Mass Spectrometry.

Lamont L, Eijkel GB, Jones EA, Flinders B, Ellis SR, Porta Siegel T, Heeren RMA, Vreeken RJ.

Anal Chem. 2018 Nov 20;90(22):13229-13235. doi: 10.1021/acs.analchem.8b03857. Epub 2018 Nov 6.

10.

Strategies for managing multi-patient 3D mass spectrometry imaging data.

Vos DRN, Jansen I, Lucas M, Paine MRL, de Boer OJ, Meijer SL, Savci-Heijink CD, Marquering HA, de Bruin DM, Heeren RMA, Ellis SR, Balluff B.

J Proteomics. 2019 Feb 20;193:184-191. doi: 10.1016/j.jprot.2018.10.008. Epub 2018 Oct 19.

11.

The Effect of Focal Distance, Age, and Brightness on Near-Field Augmented Reality Depth Matching.

Singh G, Ellis SR, Swan Ii JE.

IEEE Trans Vis Comput Graph. 2018 Sep 12. doi: 10.1109/TVCG.2018.2869729. [Epub ahead of print]

PMID:
30222576
12.

Enantioselective Silver-Catalyzed Cascade Synthesis of Fused Lactone and Lactam Oxazolines.

de la Campa R, Manzano R, Calleja P, Ellis SR, Dixon DJ.

Org Lett. 2018 Oct 5;20(19):6033-6036. doi: 10.1021/acs.orglett.8b02383. Epub 2018 Sep 17.

PMID:
30221522
13.

Digestion-Free Analysis of Peptides from 30-year-old Formalin-Fixed, Paraffin-Embedded Tissue by Mass Spectrometry Imaging.

Paine MRL, Ellis SR, Maloney D, Heeren RMA, Verhaert PDEM.

Anal Chem. 2018 Aug 7;90(15):9272-9280. doi: 10.1021/acs.analchem.8b01838. Epub 2018 Jul 18.

14.

Excited-state vibrational dynamics toward the polaron in methylammonium lead iodide perovskite.

Park M, Neukirch AJ, Reyes-Lillo SE, Lai M, Ellis SR, Dietze D, Neaton JB, Yang P, Tretiak S, Mathies RA.

Nat Commun. 2018 Jun 28;9(1):2525. doi: 10.1038/s41467-018-04946-7.

15.

Prospective, randomized, double-blind assessment of topical bakuchiol and retinol for facial photoageing.

Dhaliwal S, Rybak I, Ellis SR, Notay M, Trivedi M, Burney W, Vaughn AR, Nguyen M, Reiter P, Bosanac S, Yan H, Foolad N, Sivamani RK.

Br J Dermatol. 2019 Feb;180(2):289-296. doi: 10.1111/bjd.16918. Epub 2018 Sep 21.

PMID:
29947134
16.

Mass Spectrometry Imaging with Isomeric Resolution Enabled by Ozone-Induced Dissociation.

Paine MRL, Poad BLJ, Eijkel GB, Marshall DL, Blanksby SJ, Heeren RMA, Ellis SR.

Angew Chem Int Ed Engl. 2018 Aug 13;57(33):10530-10534. doi: 10.1002/anie.201802937. Epub 2018 Jun 19.

17.

Automated, parallel mass spectrometry imaging and structural identification of lipids.

Ellis SR, Paine MRL, Eijkel GB, Pauling JK, Husen P, Jervelund MW, Hermansson M, Ejsing CS, Heeren RMA.

Nat Methods. 2018 Jul;15(7):515-518. doi: 10.1038/s41592-018-0010-6. Epub 2018 May 21.

PMID:
29786091
18.

A functional assay for the clinical annotation of genetic variants of uncertain significance in Diamond-Blackfan anemia.

Aspesi A, Betti M, Sculco M, Actis C, Olgasi C, Wlodarski MW, Vlachos A, Lipton JM, Ramenghi U, Santoro C, Follenzi A, Ellis SR, Dianzani I.

Hum Mutat. 2018 Aug;39(8):1102-1111. doi: 10.1002/humu.23551. Epub 2018 May 28.

19.

Increased Prevalence of Congenital Heart Disease in Children With Diamond Blackfan Anemia Suggests Unrecognized Diamond Blackfan Anemia as a Cause of Congenital Heart Disease in the General Population: A Report of the Diamond Blackfan Anemia Registry.

Vlachos A, Osorio DS, Atsidaftos E, Kang J, Lababidi ML, Seiden HS, Gruber D, Glader BE, Onel K, Farrar JE, Bodine DM, Aspesi A, Dianzani I, Ramenghi U, Ellis SR, Lipton JM.

Circ Genom Precis Med. 2018 May;11(5):e002044. doi: 10.1161/CIRCGENETICS.117.002044. No abstract available.

20.

NF-κB-mediated metabolic remodelling in the inflamed heart in acute viral myocarditis.

Remels AHV, Derks WJA, Cillero-Pastor B, Verhees KJP, Kelders MC, Heggermont W, Carai P, Summer G, Ellis SR, de Theije CC, Heeren RMA, Heymans S, Papageorgiou AP, van Bilsen M.

Biochim Biophys Acta Mol Basis Dis. 2018 Aug;1864(8):2579-2589. doi: 10.1016/j.bbadis.2018.04.022. Epub 2018 May 3.

21.

Spatial Systems Lipidomics Reveals Nonalcoholic Fatty Liver Disease Heterogeneity.

Ščupáková K, Soons Z, Ertaylan G, Pierzchalski KA, Eijkel GB, Ellis SR, Greve JW, Driessen A, Verheij J, De Kok TM, Olde Damink SWM, Rensen SS, Heeren RMA.

Anal Chem. 2018 Apr 17;90(8):5130-5138. doi: 10.1021/acs.analchem.7b05215. Epub 2018 Apr 3.

22.

Difference Bands in Time-Resolved Femtosecond Stimulated Raman Spectra of Photoexcited Intermolecular Electron Transfer from Chloronaphthalene to Tetracyanoethylene.

Ellis SR, Hoffman DP, Park M, Mathies RA.

J Phys Chem A. 2018 Apr 12;122(14):3594-3605. doi: 10.1021/acs.jpca.8b00318. Epub 2018 Apr 2.

PMID:
29558802
23.

Ribosome Levels Selectively Regulate Translation and Lineage Commitment in Human Hematopoiesis.

Khajuria RK, Munschauer M, Ulirsch JC, Fiorini C, Ludwig LS, McFarland SK, Abdulhay NJ, Specht H, Keshishian H, Mani DR, Jovanovic M, Ellis SR, Fulco CP, Engreitz JM, Schütz S, Lian J, Gripp KW, Weinberg OK, Pinkus GS, Gehrke L, Regev A, Lander ES, Gazda HT, Lee WY, Panse VG, Carr SA, Sankaran VG.

Cell. 2018 Mar 22;173(1):90-103.e19. doi: 10.1016/j.cell.2018.02.036. Epub 2018 Mar 15.

24.

Inflamed actinic keratoses associated with pemetrexed and carboplatin therapy.

Lam J, Ellis SR, Sivamani RK.

Dermatol Online J. 2017 Oct 15;23(10). pii: 13030/qt77s2r0p9.

25.

Simultaneous lipidomic and transcriptomic profiling in mouse brain punches of acute epileptic seizure model compared to controls.

Lerner R, Post JM, Ellis SR, Vos DRN, Heeren RMA, Lutz B, Bindila L.

J Lipid Res. 2018 Feb;59(2):283-297. doi: 10.1194/jlr.M080093. Epub 2017 Dec 5.

26.

Host-based lipid inflammation drives pathogenesis in Francisella infection.

Scott AJ, Post JM, Lerner R, Ellis SR, Lieberman J, Shirey KA, Heeren RMA, Bindila L, Ernst RK.

Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12596-12601. doi: 10.1073/pnas.1712887114. Epub 2017 Nov 6.

27.

Lymphoblastoid cell lines from Diamond Blackfan anaemia patients exhibit a full ribosomal stress phenotype that is rescued by gene therapy.

Aspesi A, Monteleone V, Betti M, Actis C, Morleo G, Sculco M, Guarrera S, Wlodarski MW, Ramenghi U, Santoro C, Ellis SR, Loreni F, Follenzi A, Dianzani I.

Sci Rep. 2017 Sep 20;7(1):12010. doi: 10.1038/s41598-017-12307-5. Erratum in: Sci Rep. 2018 Nov 16;8(1):17227.

28.

Design and Performance of a Novel Interface for Combined Matrix-Assisted Laser Desorption Ionization at Elevated Pressure and Electrospray Ionization with Orbitrap Mass Spectrometry.

Belov ME, Ellis SR, Dilillo M, Paine MRL, Danielson WF, Anderson GA, de Graaf EL, Eijkel GB, Heeren RMA, McDonnell LA.

Anal Chem. 2017 Jul 18;89(14):7493-7501. doi: 10.1021/acs.analchem.7b01168. Epub 2017 Jun 28.

PMID:
28613836
29.

Laser post-ionisation combined with a high resolving power orbitrap mass spectrometer for enhanced MALDI-MS imaging of lipids.

Ellis SR, Soltwisch J, Paine MRL, Dreisewerd K, Heeren RMA.

Chem Commun (Camb). 2017 Jun 29;53(53):7246-7249. doi: 10.1039/c7cc02325a.

PMID:
28573274
30.

Detection of Localized Hepatocellular Amino Acid Kinetics by using Mass Spectrometry Imaging of Stable Isotopes.

Arts M, Soons Z, Ellis SR, Pierzchalski KA, Balluff B, Eijkel GB, Dubois LJ, Lieuwes NG, Agten SM, Hackeng TM, van Loon LJC, Heeren RMA, Olde Damink SWM.

Angew Chem Int Ed Engl. 2017 Jun 12;56(25):7146-7150. doi: 10.1002/anie.201702669. Epub 2017 May 11.

31.

Radical Generation from the Gas-Phase Activation of Ionized Lipid Ozonides.

Ellis SR, Pham HT, In Het Panhuis M, Trevitt AJ, Mitchell TW, Blanksby SJ.

J Am Soc Mass Spectrom. 2017 Jul;28(7):1345-1358. doi: 10.1007/s13361-017-1649-4. Epub 2017 May 8.

32.

Access to a Guanacastepene and Cortistatin-Related Skeleton via Ethynyl Lactone Ireland-Claisen Rearrangement and Transannular (4 + 3)-Cycloaddition of an Azatrimethylenemethane Diyl.

Zhurakovskyi O, Ellis SR, Thompson AL, Robertson J.

Org Lett. 2017 Apr 21;19(8):2174-2177. doi: 10.1021/acs.orglett.7b00834. Epub 2017 Apr 11.

PMID:
28398058
33.

Molecular convergence in ex vivo models of Diamond-Blackfan anemia.

O'Brien KA, Farrar JE, Vlachos A, Anderson SM, Tsujiura CA, Lichtenberg J, Blanc L, Atsidaftos E, Elkahloun A, An X, Ellis SR, Lipton JM, Bodine DM.

Blood. 2017 Jun 8;129(23):3111-3120. doi: 10.1182/blood-2017-01-760462. Epub 2017 Apr 4.

34.

Novel and known ribosomal causes of Diamond-Blackfan anaemia identified through comprehensive genomic characterisation.

Mirabello L, Khincha PP, Ellis SR, Giri N, Brodie S, Chandrasekharappa SC, Donovan FX, Zhou W, Hicks BD, Boland JF, Yeager M, Jones K, Zhu B, Wang M, Alter BP, Savage SA.

J Med Genet. 2017 Jun;54(6):417-425. doi: 10.1136/jmedgenet-2016-104346. Epub 2017 Mar 9.

PMID:
28280134
35.

Deletion of ribosomal protein genes is a common vulnerability in human cancer, especially in concert with TP53 mutations.

Ajore R, Raiser D, McConkey M, Jöud M, Boidol B, Mar B, Saksena G, Weinstock DM, Armstrong S, Ellis SR, Ebert BL, Nilsson B.

EMBO Mol Med. 2017 Apr;9(4):498-507. doi: 10.15252/emmm.201606660.

36.

Proapoptotic Requirement of Ribosomal Protein L11 in Ribosomal Stress-Challenged Cortical Neurons.

Slomnicki LP, Hallgren J, Vashishta A, Smith SC, Ellis SR, Hetman M.

Mol Neurobiol. 2018 Jan;55(1):538-553. doi: 10.1007/s12035-016-0336-y. Epub 2016 Dec 14.

PMID:
27975169
37.
38.

Organocatalytic enantioselective desymmetrisation.

Borissov A, Davies TQ, Ellis SR, Fleming TA, Richardson MS, Dixon DJ.

Chem Soc Rev. 2016 Oct 21;45(20):5474-5540. Epub 2016 Jun 27.

PMID:
27347567
39.

Spatial Autocorrelation in Mass Spectrometry Imaging.

Cassese A, Ellis SR, Ogrinc Potočnik N, Burgermeister E, Ebert M, Walch A, van den Maagdenberg AM, McDonnell LA, Heeren RM, Balluff B.

Anal Chem. 2016 Jun 7;88(11):5871-8. doi: 10.1021/acs.analchem.6b00672. Epub 2016 May 24.

PMID:
27180608
40.

More from less: high-throughput dual polarity lipid imaging of biological tissues.

Ellis SR, Cappell J, Potočnik NO, Balluff B, Hamaide J, Van der Linden A, Heeren RM.

Analyst. 2016 Jun 21;141(12):3832-41. doi: 10.1039/c6an00169f. Epub 2016 Apr 4.

PMID:
27041214
41.

Enhanced capabilities for imaging gangliosides in murine brain with matrix-assisted laser desorption/ionization and desorption electrospray ionization mass spectrometry coupled to ion mobility separation.

Škrášková K, Claude E, Jones EA, Towers M, Ellis SR, Heeren RM.

Methods. 2016 Jul 15;104:69-78. doi: 10.1016/j.ymeth.2016.02.014. Epub 2016 Feb 23.

PMID:
26922843
42.

Ribosomal RNA analysis in the diagnosis of Diamond-Blackfan Anaemia.

Quarello P, Garelli E, Carando A, Mancini C, Foglia L, Botto C, Farruggia P, De Keersmaecker K, Aspesi A, Ellis SR, Dianzani I, Ramenghi U.

Br J Haematol. 2016 Mar;172(5):782-5. doi: 10.1111/bjh.13880. Epub 2016 Jan 13.

PMID:
26763766
43.

Use of advantageous, volatile matrices enabled by next-generation high-speed matrix-assisted laser desorption/ionization time-of-flight imaging employing a scanning laser beam.

Ogrinc Potočnik N, Porta T, Becker M, Heeren RM, Ellis SR.

Rapid Commun Mass Spectrom. 2015 Dec 15;29(23):2195-203. doi: 10.1002/rcm.7379.

PMID:
26522310
44.

Immunophenotypic Profiling of Erythroid Progenitor-Derived Extracellular Vesicles in Diamond-Blackfan Anaemia: A New Diagnostic Strategy.

Macrì S, Pavesi E, Crescitelli R, Aspesi A, Vizziello C, Botto C, Corti P, Quarello P, Notari P, Ramenghi U, Ellis SR, Dianzani I.

PLoS One. 2015 Sep 22;10(9):e0138200. doi: 10.1371/journal.pone.0138200. eCollection 2015.

45.

Matching and reaching depth judgments with real and augmented reality targets.

Swan JE 2nd, Singh G, Ellis SR.

IEEE Trans Vis Comput Graph. 2015 Nov;21(11):1289-98. doi: 10.1109/TVCG.2015.2459895. Epub 2015 Jul 22.

PMID:
26340777
46.

Supramolecular Ga4L6(12-) Cage Photosensitizes 1,3-Rearrangement of Encapsulated Guest via Photoinduced Electron Transfer.

Dalton DM, Ellis SR, Nichols EM, Mathies RA, Toste FD, Bergman RG, Raymond KN.

J Am Chem Soc. 2015 Aug 19;137(32):10128-31. doi: 10.1021/jacs.5b06317. Epub 2015 Aug 10.

PMID:
26256754
47.

Direct ion imaging approach for investigation of ion dynamics in multipole ion guides.

Syed SU, Maher S, Eijkel GB, Ellis SR, Jjunju F, Taylor S, Heeren RM.

Anal Chem. 2015 Apr 7;87(7):3714-20. doi: 10.1021/ac5041764. Epub 2015 Mar 23.

PMID:
25710191
48.

Bmi1 promotes erythroid development through regulating ribosome biogenesis.

Gao R, Chen S, Kobayashi M, Yu H, Zhang Y, Wan Y, Young SK, Soltis A, Yu M, Vemula S, Fraenkel E, Cantor A, Antipin Y, Xu Y, Yoder MC, Wek RC, Ellis SR, Kapur R, Zhu X, Liu Y.

Stem Cells. 2015 Mar;33(3):925-38. doi: 10.1002/stem.1896.

49.

Exploiting pre-rRNA processing in Diamond Blackfan anemia gene discovery and diagnosis.

Farrar JE, Quarello P, Fisher R, O'Brien KA, Aspesi A, Parrella S, Henson AL, Seidel NE, Atsidaftos E, Prakash S, Bari S, Garelli E, Arceci RJ, Dianzani I, Ramenghi U, Vlachos A, Lipton JM, Bodine DM, Ellis SR.

Am J Hematol. 2014 Oct;89(10):985-91. doi: 10.1002/ajh.23807. Epub 2014 Aug 4.

50.

Characterization of a conical intersection in a charge-transfer dimer with two-dimensional time-resolved stimulated Raman spectroscopy.

Hoffman DP, Ellis SR, Mathies RA.

J Phys Chem A. 2014 Jul 10;118(27):4955-65. doi: 10.1021/jp5041986. Epub 2014 Jun 27.

PMID:
24932925

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