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Items: 1 to 50 of 61

1.

A pair of peptides inhibits seeding of the hormone transporter transthyretin into amyloid fibrils.

Saelices L, Nguyen BA, Chung K, Wang Y, Ortega A, Lee JH, Coelho T, Bijzet J, Benson MD, Eisenberg DS.

J Biol Chem. 2019 Feb 7. pii: jbc.RA118.005257. doi: 10.1074/jbc.RA118.005257. [Epub ahead of print]

2.

Amyloid nomenclature 2018: recommendations by the International Society of Amyloidosis (ISA) nomenclature committee.

Benson MD, Buxbaum JN, Eisenberg DS, Merlini G, Saraiva MJM, Sekijima Y, Sipe JD, Westermark P.

Amyloid. 2018 Dec;25(4):215-219. doi: 10.1080/13506129.2018.1549825. Epub 2019 Jan 7.

PMID:
30614283
3.

TDP-43 and RNA form amyloid-like myo-granules in regenerating muscle.

Vogler TO, Wheeler JR, Nguyen ED, Hughes MP, Britson KA, Lester E, Rao B, Betta ND, Whitney ON, Ewachiw TE, Gomes E, Shorter J, Lloyd TE, Eisenberg DS, Taylor JP, Johnson AM, Olwin BB, Parker R.

Nature. 2018 Nov;563(7732):508-513. doi: 10.1038/s41586-018-0665-2. Epub 2018 Oct 31.

PMID:
30464263
4.

Author Correction: Inhibiting amyloid-β cytotoxicity through its interaction with the cell surface receptor LilrB2 by structure-based design.

Cao Q, Shin WS, Chan H, Vuong CK, Dubois B, Li B, Murray KA, Sawaya MR, Feigon J, Black DL, Eisenberg DS, Jiang L.

Nat Chem. 2018 Dec;10(12):1267. doi: 10.1038/s41557-018-0182-9.

PMID:
30420778
5.

Identification of two principal amyloid-driving segments in variable domains of Ig light chains in systemic light-chain amyloidosis.

Brumshtein B, Esswein SR, Sawaya MR, Rosenberg G, Ly AT, Landau M, Eisenberg DS.

J Biol Chem. 2018 Dec 21;293(51):19659-19671. doi: 10.1074/jbc.RA118.004142. Epub 2018 Oct 24.

PMID:
30355736
6.

Inhibiting amyloid-β cytotoxicity through its interaction with the cell surface receptor LilrB2 by structure-based design.

Cao Q, Shin WS, Chan H, Vuong CK, Dubois B, Li B, Murray KA, Sawaya MR, Feigon J, Black DL, Eisenberg DS, Jiang L.

Nat Chem. 2018 Dec;10(12):1213-1221. doi: 10.1038/s41557-018-0147-z. Epub 2018 Oct 8. Erratum in: Nat Chem. 2018 Nov 12;:.

PMID:
30297750
7.

Assessment of the effects of transthyretin peptide inhibitors in Drosophila models of neuropathic ATTR.

Saelices L, Pokrzywa M, Pawelek K, Eisenberg DS.

Neurobiol Dis. 2018 Dec;120:118-125. doi: 10.1016/j.nbd.2018.09.007. Epub 2018 Sep 10. No abstract available.

PMID:
30213731
8.

Cryo-EM of full-length α-synuclein reveals fibril polymorphs with a common structural kernel.

Li B, Ge P, Murray KA, Sheth P, Zhang M, Nair G, Sawaya MR, Shin WS, Boyer DR, Ye S, Eisenberg DS, Zhou ZH, Jiang L.

Nat Commun. 2018 Sep 6;9(1):3609. doi: 10.1038/s41467-018-05971-2.

9.

Atomic insights into the genesis of cellular filaments by globular proteins.

McPartland L, Heller DM, Eisenberg DS, Hochschild A, Sawaya MR.

Nat Struct Mol Biol. 2018 Aug;25(8):705-714. doi: 10.1038/s41594-018-0096-7. Epub 2018 Aug 3.

10.

Paul D. Boyer (1918-2018).

Eisenberg DS.

Science. 2018 Jul 27;361(6400):334. doi: 10.1126/science.aau6601. No abstract available.

PMID:
30049866
11.

How Hard It Is Seeing What Is in Front of Your Eyes.

Eisenberg DS.

Cell. 2018 Jun 28;174(1):8-11. doi: 10.1016/j.cell.2018.06.027. No abstract available.

PMID:
29958112
12.

Amyloid seeding of transthyretin by ex vivo cardiac fibrils and its inhibition.

Saelices L, Chung K, Lee JH, Cohn W, Whitelegge JP, Benson MD, Eisenberg DS.

Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):E6741-E6750. doi: 10.1073/pnas.1805131115. Epub 2018 Jun 28.

13.

Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.

Guenther EL, Cao Q, Trinh H, Lu J, Sawaya MR, Cascio D, Boyer DR, Rodriguez JA, Hughes MP, Eisenberg DS.

Nat Struct Mol Biol. 2018 Jun;25(6):463-471. doi: 10.1038/s41594-018-0064-2. Epub 2018 May 21.

14.

Crystal structures of amyloidogenic segments of human transthyretin.

Saelices L, Sievers SA, Sawaya MR, Eisenberg DS.

Protein Sci. 2018 Jul;27(7):1295-1303. doi: 10.1002/pro.3420. Epub 2018 Jun 13.

PMID:
29626847
15.

Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.

Guenther EL, Ge P, Trinh H, Sawaya MR, Cascio D, Boyer DR, Gonen T, Zhou ZH, Eisenberg DS.

Nat Struct Mol Biol. 2018 Apr;25(4):311-319. doi: 10.1038/s41594-018-0045-5. Epub 2018 Mar 12.

16.

Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations.

Sangwan S, Sawaya MR, Murray KA, Hughes MP, Eisenberg DS.

Protein Sci. 2018 Jul;27(7):1231-1242. doi: 10.1002/pro.3391. Epub 2018 Mar 10.

PMID:
29453800
17.

Atomic structures of low-complexity protein segments reveal kinked β sheets that assemble networks.

Hughes MP, Sawaya MR, Boyer DR, Goldschmidt L, Rodriguez JA, Cascio D, Chong L, Gonen T, Eisenberg DS.

Science. 2018 Feb 9;359(6376):698-701. doi: 10.1126/science.aan6398.

18.

Structure-based inhibitors of tau aggregation.

Seidler PM, Boyer DR, Rodriguez JA, Sawaya MR, Cascio D, Murray K, Gonen T, Eisenberg DS.

Nat Chem. 2018 Feb;10(2):170-176. doi: 10.1038/nchem.2889. Epub 2017 Nov 20.

19.

Distal amyloid β-protein fragments template amyloid assembly.

Do TD, Sangwan S, de Almeida NEC, Ilitchev AI, Giammona M, Sawaya MR, Buratto SK, Eisenberg DS, Bowers MT.

Protein Sci. 2018 Jul;27(7):1181-1190. doi: 10.1002/pro.3375. Epub 2018 Feb 16.

PMID:
29349888
20.

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp.

Gallagher-Jones M, Glynn C, Boyer DR, Martynowycz MW, Hernandez E, Miao J, Zee CT, Novikova IV, Goldschmidt L, McFarlane HT, Helguera GF, Evans JE, Sawaya MR, Cascio D, Eisenberg DS, Gonen T, Rodriguez JA.

Nat Struct Mol Biol. 2018 Feb;25(2):131-134. doi: 10.1038/s41594-017-0018-0. Epub 2018 Jan 15.

21.

Common fibrillar spines of amyloid-β and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors.

Krotee P, Griner SL, Sawaya MR, Cascio D, Rodriguez JA, Shi D, Philipp S, Murray K, Saelices L, Lee J, Seidler P, Glabe CG, Jiang L, Gonen T, Eisenberg DS.

J Biol Chem. 2018 Feb 23;293(8):2888-2902. doi: 10.1074/jbc.M117.806109. Epub 2017 Dec 27.

PMID:
29282295
22.

Asparagine and glutamine ladders promote cross-species prion conversion.

Kurt TD, Aguilar-Calvo P, Jiang L, Rodriguez JA, Alderson N, Eisenberg DS, Sigurdson CJ.

J Biol Chem. 2017 Nov 17;292(46):19076-19086. doi: 10.1074/jbc.M117.794107. Epub 2017 Sep 20.

23.

Propagation of Tau Aggregates and Neurodegeneration.

Goedert M, Eisenberg DS, Crowther RA.

Annu Rev Neurosci. 2017 Jul 25;40:189-210. doi: 10.1146/annurev-neuro-072116-031153. Review.

PMID:
28772101
24.

Atomic structure of a toxic, oligomeric segment of SOD1 linked to amyotrophic lateral sclerosis (ALS).

Sangwan S, Zhao A, Adams KL, Jayson CK, Sawaya MR, Guenther EL, Pan AC, Ngo J, Moore DM, Soriaga AB, Do TD, Goldschmidt L, Nelson R, Bowers MT, Koehler CM, Shaw DE, Novitch BG, Eisenberg DS.

Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):8770-8775. doi: 10.1073/pnas.1705091114. Epub 2017 Jul 31.

25.

Neurodegeneration: Taming tangled tau.

Eisenberg DS, Sawaya MR.

Nature. 2017 Jul 13;547(7662):170-171. doi: 10.1038/nature23094. Epub 2017 Jul 5. No abstract available.

PMID:
28678777
26.

Taking the measure of MicroED.

Rodriguez JA, Eisenberg DS, Gonen T.

Curr Opin Struct Biol. 2017 Oct;46:79-86. doi: 10.1016/j.sbi.2017.06.004. Epub 2017 Jun 22. Review.

27.

Flow-aligned, single-shot fiber diffraction using a femtosecond X-ray free-electron laser.

Popp D, Loh ND, Zorgati H, Ghoshdastider U, Liow LT, Ivanova MI, Larsson M, DePonte DP, Bean R, Beyerlein KR, Gati C, Oberthuer D, Arnlund D, Brändén G, Berntsen P, Cascio D, Chavas LMG, Chen JPJ, Ding K, Fleckenstein H, Gumprecht L, Harimoorthy R, Mossou E, Sawaya MR, Brewster AS, Hattne J, Sauter NK, Seibert M, Seuring C, Stellato F, Tilp T, Eisenberg DS, Messerschmidt M, Williams GJ, Koglin JE, Makowski L, Millane RP, Forsyth T, Boutet S, White TA, Barty A, Chapman H, Chen SL, Liang M, Neutze R, Robinson RC.

Cytoskeleton (Hoboken). 2017 Dec;74(12):472-481. doi: 10.1002/cm.21378. Epub 2017 Jun 19.

28.

Perspective on SOD1 mediated toxicity in Amyotrophic Lateral Sclerosis.

Sangwan S, Eisenberg DS.

Postepy Biochem. 2016;62(3):362-369. Review.

29.

Structural Studies of Amyloid Proteins at the Molecular Level.

Eisenberg DS, Sawaya MR.

Annu Rev Biochem. 2017 Jun 20;86:69-95. doi: 10.1146/annurev-biochem-061516-045104. Epub 2017 Jan 3. Review.

PMID:
28125289
30.

Toward the Atomic Structure of PrPSc.

Rodriguez JA, Jiang L, Eisenberg DS.

Cold Spring Harb Perspect Biol. 2017 Sep 1;9(9). pii: a031336. doi: 10.1101/cshperspect.a031336. Review.

PMID:
28096267
31.

Atomic structures of fibrillar segments of hIAPP suggest tightly mated β-sheets are important for cytotoxicity.

Krotee P, Rodriguez JA, Sawaya MR, Cascio D, Reyes FE, Shi D, Hattne J, Nannenga BL, Oskarsson ME, Philipp S, Griner S, Jiang L, Glabe CG, Westermark GT, Gonen T, Eisenberg DS.

Elife. 2017 Jan 3;6. pii: e19273. doi: 10.7554/eLife.19273.

32.

The activities of amyloids from a structural perspective.

Riek R, Eisenberg DS.

Nature. 2016 Nov 10;539(7628):227-235. doi: 10.1038/nature20416. Review.

PMID:
27830791
33.

De novo phasing with X-ray laser reveals mosquito larvicide BinAB structure.

Colletier JP, Sawaya MR, Gingery M, Rodriguez JA, Cascio D, Brewster AS, Michels-Clark T, Hice RH, Coquelle N, Boutet S, Williams GJ, Messerschmidt M, DePonte DP, Sierra RG, Laksmono H, Koglin JE, Hunter MS, Park HW, Uervirojnangkoorn M, Bideshi DK, Brunger AT, Federici BA, Sauter NK, Eisenberg DS.

Nature. 2016 Nov 3;539(7627):43-47. doi: 10.1038/nature19825. Epub 2016 Sep 28.

34.

Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.

Sawaya MR, Rodriguez J, Cascio D, Collazo MJ, Shi D, Reyes FE, Hattne J, Gonen T, Eisenberg DS.

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11232-11236. Epub 2016 Sep 19.

35.

Implications for Alzheimer's disease of an atomic resolution structure of amyloid-β(1-42) fibrils.

Eisenberg DS, Sawaya MR.

Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):9398-400. doi: 10.1073/pnas.1610806113. Epub 2016 Aug 9. No abstract available.

36.

The formation, function and regulation of amyloids: insights from structural biology.

Landreh M, Sawaya MR, Hipp MS, Eisenberg DS, Wüthrich K, Hartl FU.

J Intern Med. 2016 Aug;280(2):164-76. doi: 10.1111/joim.12500. Epub 2016 May 30. Review.

37.

A Designed Inhibitor of p53 Aggregation Rescues p53 Tumor Suppression in Ovarian Carcinomas.

Soragni A, Janzen DM, Johnson LM, Lindgren AG, Thai-Quynh Nguyen A, Tiourin E, Soriaga AB, Lu J, Jiang L, Faull KF, Pellegrini M, Memarzadeh S, Eisenberg DS.

Cancer Cell. 2016 Jan 11;29(1):90-103. doi: 10.1016/j.ccell.2015.12.002. Epub 2015 Dec 31.

38.

Inhibition by small-molecule ligands of formation of amyloid fibrils of an immunoglobulin light chain variable domain.

Brumshtein B, Esswein SR, Salwinski L, Phillips ML, Ly AT, Cascio D, Sawaya MR, Eisenberg DS.

Elife. 2015 Nov 18;4:e10935. doi: 10.7554/eLife.10935.

39.

Uncovering the Mechanism of Aggregation of Human Transthyretin.

Saelices L, Johnson LM, Liang WY, Sawaya MR, Cascio D, Ruchala P, Whitelegge J, Jiang L, Riek R, Eisenberg DS.

J Biol Chem. 2015 Nov 27;290(48):28932-43. doi: 10.1074/jbc.M115.659912. Epub 2015 Oct 12.

40.

Structure of the toxic core of α-synuclein from invisible crystals.

Rodriguez JA, Ivanova MI, Sawaya MR, Cascio D, Reyes FE, Shi D, Sangwan S, Guenther EL, Johnson LM, Zhang M, Jiang L, Arbing MA, Nannenga BL, Hattne J, Whitelegge J, Brewster AS, Messerschmidt M, Boutet S, Sauter NK, Gonen T, Eisenberg DS.

Nature. 2015 Sep 24;525(7570):486-90. doi: 10.1038/nature15368. Epub 2015 Sep 9.

41.

Toxicity of eosinophil MBP is repressed by intracellular crystallization and promoted by extracellular aggregation.

Soragni A, Yousefi S, Stoeckle C, Soriaga AB, Sawaya MR, Kozlowski E, Schmid I, Radonjic-Hoesli S, Boutet S, Williams GJ, Messerschmidt M, Seibert MM, Cascio D, Zatsepin NA, Burghammer M, Riekel C, Colletier JP, Riek R, Eisenberg DS, Simon HU.

Mol Cell. 2015 Mar 19;57(6):1011-1021. doi: 10.1016/j.molcel.2015.01.026. Epub 2015 Feb 26.

42.

Indexing amyloid peptide diffraction from serial femtosecond crystallography: new algorithms for sparse patterns.

Brewster AS, Sawaya MR, Rodriguez J, Hattne J, Echols N, McFarlane HT, Cascio D, Adams PD, Eisenberg DS, Sauter NK.

Acta Crystallogr D Biol Crystallogr. 2015 Feb;71(Pt 2):357-66. doi: 10.1107/S1399004714026145. Epub 2015 Jan 23.

43.

Structure-based design of functional amyloid materials.

Li D, Jones EM, Sawaya MR, Furukawa H, Luo F, Ivanova M, Sievers SA, Wang W, Yaghi OM, Liu C, Eisenberg DS.

J Am Chem Soc. 2014 Dec 31;136(52):18044-51. doi: 10.1021/ja509648u. Epub 2014 Dec 19.

PMID:
25474758
44.

Formation of amyloid fibers by monomeric light chain variable domains.

Brumshtein B, Esswein SR, Landau M, Ryan CM, Whitelegge JP, Phillips ML, Cascio D, Sawaya MR, Eisenberg DS.

J Biol Chem. 2014 Oct 3;289(40):27513-25. doi: 10.1074/jbc.M114.585638. Epub 2014 Aug 19.

45.

Protein crystal structure obtained at 2.9 Å resolution from injecting bacterial cells into an X-ray free-electron laser beam.

Sawaya MR, Cascio D, Gingery M, Rodriguez J, Goldschmidt L, Colletier JP, Messerschmidt MM, Boutet S, Koglin JE, Williams GJ, Brewster AS, Nass K, Hattne J, Botha S, Doak RB, Shoeman RL, DePonte DP, Park HW, Federici BA, Sauter NK, Schlichting I, Eisenberg DS.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12769-74. doi: 10.1073/pnas.1413456111. Epub 2014 Aug 18.

46.

Factors that drive peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.

Do TD, LaPointe NE, Sangwan S, Teplow DB, Feinstein SC, Sawaya MR, Eisenberg DS, Bowers MT.

J Phys Chem B. 2014 Jul 3;118(26):7247-56. doi: 10.1021/jp502473s. Epub 2014 Jun 18.

47.

The structured core domain of αB-crystallin can prevent amyloid fibrillation and associated toxicity.

Hochberg GK, Ecroyd H, Liu C, Cox D, Cascio D, Sawaya MR, Collier MP, Stroud J, Carver JA, Baldwin AJ, Robinson CV, Eisenberg DS, Benesch JL, Laganowsky A.

Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):E1562-70. doi: 10.1073/pnas.1322673111. Epub 2014 Apr 7.

48.

Designed amyloid fibers as materials for selective carbon dioxide capture.

Li D, Furukawa H, Deng H, Liu C, Yaghi OM, Eisenberg DS.

Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):191-6. doi: 10.1073/pnas.1321797111. Epub 2013 Dec 23.

49.

Aggregation-triggering segments of SOD1 fibril formation support a common pathway for familial and sporadic ALS.

Ivanova MI, Sievers SA, Guenther EL, Johnson LM, Winkler DD, Galaleldeen A, Sawaya MR, Hart PJ, Eisenberg DS.

Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):197-201. doi: 10.1073/pnas.1320786110. Epub 2013 Dec 16.

50.

Structure-based discovery of fiber-binding compounds that reduce the cytotoxicity of amyloid beta.

Jiang L, Liu C, Leibly D, Landau M, Zhao M, Hughes MP, Eisenberg DS.

Elife. 2013 Jul 16;2:e00857. doi: 10.7554/eLife.00857. Erratum in: Elife. 2013;2:e01252.

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