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Items: 1 to 50 of 287

1.

Chlorinated Electron Acceptor Abundance Drives Selection of Dehalococcoides mccartyi (D. mccartyi) Strains in Dechlorinating Enrichment Cultures and Groundwater Environments.

Pérez-de-Mora A, Lacourt A, McMaster ML, Liang X, Dworatzek SM, Edwards EA.

Front Microbiol. 2018 May 17;9:812. doi: 10.3389/fmicb.2018.00812. eCollection 2018.

2.

Biosynthesis and Activity of Prenylated FMN Cofactors.

Wang PH, Khusnutdinova AN, Luo F, Xiao J, Nemr K, Flick R, Brown G, Mahadevan R, Edwards EA, Yakunin AF.

Cell Chem Biol. 2018 May 17;25(5):560-570.e6. doi: 10.1016/j.chembiol.2018.02.007. Epub 2018 Mar 15.

PMID:
29551348
3.

Evaluating the effect of enzymatic pretreatment on the anaerobic digestibility of pulp and paper biosludge.

Bonilla S, Choolaei Z, Meyer T, Edwards EA, Yakunin AF, Allen DG.

Biotechnol Rep (Amst). 2018 Jan 5;17:77-85. doi: 10.1016/j.btre.2017.12.009. eCollection 2018 Mar.

4.

Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment.

Wong MT, Wang W, Couturier M, Razeq FM, Lombard V, Lapebie P, Edwards EA, Terrapon N, Henrissat B, Master ER.

Front Microbiol. 2017 Dec 20;8:2504. doi: 10.3389/fmicb.2017.02504. eCollection 2017.

5.

Natural Attenuation and Anaerobic Benzene Detoxification Processes at a Chlorobenzene-Contaminated Industrial Site Inferred from Field Investigations and Microcosm Studies.

Qiao W, Luo F, Lomheim L, Mack EE, Ye S, Wu J, Edwards EA.

Environ Sci Technol. 2018 Jan 2;52(1):22-31. doi: 10.1021/acs.est.7b04145. Epub 2017 Dec 14.

PMID:
29178800
6.

Purinyl-cobamide is a native prosthetic group of reductive dehalogenases.

Yan J, Bi M, Bourdon AK, Farmer AT, Wang PH, Molenda O, Quaile AT, Jiang N, Yang Y, Yin Y, Şimşir B, Campagna SR, Edwards EA, Löffler FE.

Nat Chem Biol. 2018 Jan;14(1):8-14. doi: 10.1038/nchembio.2512. Epub 2017 Nov 6.

PMID:
29106396
8.

Intussusception: past, present and future.

Edwards EA, Pigg N, Courtier J, Zapala MA, MacKenzie JD, Phelps AS.

Pediatr Radiol. 2017 Aug;47(9):1101-1108. doi: 10.1007/s00247-017-3878-x. Epub 2017 Aug 4. Review.

PMID:
28779197
9.

Incidental Findings on Pediatric Abdominal Magnetic Resonance Angiography.

Leelakanok N, Zapala MA, Edwards EA, Phelps AS, Mackenzie JD, Courtier J.

Acad Radiol. 2017 Sep;24(9):1107-1113. doi: 10.1016/j.acra.2017.01.019. Epub 2017 Mar 9.

PMID:
28285838
10.

Arsenic Methylation and its Relationship to Abundance and Diversity of arsM Genes in Composting Manure.

Zhai W, Wong MT, Luo F, Hashmi MZ, Liu X, Edwards EA, Tang X, Xu J.

Sci Rep. 2017 Mar 7;7:42198. doi: 10.1038/srep42198.

11.

Complete Genome Sequence of Dehalococcoides mccartyi Strain WBC-2, Capable of Anaerobic Reductive Dechlorination of Vinyl Chloride.

Molenda O, Tang S, Edwards EA.

Genome Announc. 2016 Dec 22;4(6). pii: e01375-16. doi: 10.1128/genomeA.01375-16.

12.

Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates.

Wang PH, Tang S, Nemr K, Flick R, Yan J, Mahadevan R, Yakunin AF, Löffler FE, Edwards EA.

ISME J. 2017 Mar;11(3):626-640. doi: 10.1038/ismej.2016.158. Epub 2016 Nov 29.

13.

1,2-Dichloroethane Exposure Alters the Population Structure, Metabolism, and Kinetics of a Trichloroethene-Dechlorinating Dehalococcoides mccartyi Consortium.

Mayer-Blackwell K, Fincker M, Molenda O, Callahan B, Sewell H, Holmes S, Edwards EA, Spormann AM.

Environ Sci Technol. 2016 Nov 15;50(22):12187-12196. Epub 2016 Nov 3.

PMID:
27809491
14.

Gamification for health promotion: systematic review of behaviour change techniques in smartphone apps.

Edwards EA, Lumsden J, Rivas C, Steed L, Edwards LA, Thiyagarajan A, Sohanpal R, Caton H, Griffiths CJ, Munafò MR, Taylor S, Walton RT.

BMJ Open. 2016 Oct 4;6(10):e012447. doi: 10.1136/bmjopen-2016-012447. Review.

15.

Substrate-Driven Convergence of the Microbial Community in Lignocellulose-Amended Enrichments of Gut Microflora from the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus).

Wong MT, Wang W, Lacourt M, Couturier M, Edwards EA, Master ER.

Front Microbiol. 2016 Jun 21;7:961. doi: 10.3389/fmicb.2016.00961. eCollection 2016.

16.

Gamification of Cognitive Assessment and Cognitive Training: A Systematic Review of Applications and Efficacy.

Lumsden J, Edwards EA, Lawrence NS, Coyle D, Munafò MR.

JMIR Serious Games. 2016 Jul 15;4(2):e11. doi: 10.2196/games.5888.

17.

Long-Term Field Study of Microbial Community and Dechlorinating Activity Following Carboxymethyl Cellulose-Stabilized Nanoscale Zero-Valent Iron Injection.

Kocur CM, Lomheim L, Molenda O, Weber KP, Austrins LM, Sleep BE, Boparai HK, Edwards EA, O'Carroll DM.

Environ Sci Technol. 2016 Jul 19;50(14):7658-70. doi: 10.1021/acs.est.6b01745. Epub 2016 Jun 30.

PMID:
27305345
18.

Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases.

Hajighasemi M, Nocek BP, Tchigvintsev A, Brown G, Flick R, Xu X, Cui H, Hai T, Joachimiak A, Golyshin PN, Savchenko A, Edwards EA, Yakunin AF.

Biomacromolecules. 2016 Jun 13;17(6):2027-39. doi: 10.1021/acs.biomac.6b00223. Epub 2016 May 2.

PMID:
27087107
19.

Sister Dehalobacter Genomes Reveal Specialization in Organohalide Respiration and Recent Strain Differentiation Likely Driven by Chlorinated Substrates.

Tang S, Wang PH, Higgins SA, Löffler FE, Edwards EA.

Front Microbiol. 2016 Feb 12;7:100. doi: 10.3389/fmicb.2016.00100. eCollection 2016.

20.

Cultivating microbial dark matter in benzene-degrading methanogenic consortia.

Luo F, Devine CE, Edwards EA.

Environ Microbiol. 2016 Sep;18(9):2923-36. doi: 10.1111/1462-2920.13121. Epub 2015 Dec 21.

PMID:
26549712
21.

Dehalogenimonas sp. Strain WBC-2 Genome and Identification of Its trans-Dichloroethene Reductive Dehalogenase, TdrA.

Molenda O, Quaile AT, Edwards EA.

Appl Environ Microbiol. 2015 Oct 9;82(1):40-50. doi: 10.1128/AEM.02017-15. Print 2016 Jan 1.

22.

Experimental validation of in silico model-predicted isocitrate dehydrogenase and phosphomannose isomerase from Dehalococcoides mccartyi.

Islam MA, Tchigvintsev A, Yim V, Savchenko A, Yakunin AF, Mahadevan R, Edwards EA.

Microb Biotechnol. 2016 Jan;9(1):47-60. doi: 10.1111/1751-7915.12315. Epub 2015 Sep 16.

23.

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Löffler FE, Yan J, Ritalahti KM, Adrian L, Edwards EA, Konstantinidis KT, Müller JA, Fullerton H, Zinder SH, Spormann AM.

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):2015. doi: 10.1099/ijs.0.000308. No abstract available.

PMID:
26184667
24.

Contributions of Abiotic and Biotic Dechlorination Following Carboxymethyl Cellulose Stabilized Nanoscale Zero Valent Iron Injection.

Kocur CM, Lomheim L, Boparai HK, Chowdhury AI, Weber KP, Austrins LM, Edwards EA, Sleep BE, O'Carroll DM.

Environ Sci Technol. 2015 Jul 21;49(14):8648-56. doi: 10.1021/acs.est.5b00719. Epub 2015 Jul 6.

PMID:
26090687
25.

Investigating Moorella thermoacetica metabolism with a genome-scale constraint-based metabolic model.

Islam MA, Zengler K, Edwards EA, Mahadevan R, Stephanopoulos G.

Integr Biol (Camb). 2015 Aug;7(8):869-82. doi: 10.1039/c5ib00095e.

PMID:
25994252
26.

Identity and Substrate Specificity of Reductive Dehalogenases Expressed in Dehalococcoides-Containing Enrichment Cultures Maintained on Different Chlorinated Ethenes.

Liang X, Molenda O, Tang S, Edwards EA.

Appl Environ Microbiol. 2015 Jul;81(14):4626-33. doi: 10.1128/AEM.00536-15. Epub 2015 May 1.

27.
28.

Corrigendum to "Anaerobic digestion of pulp and paper mill wastewater and sludge" [Water Res. 65 (2014) 321-349].

Meyer T, Edwards EA.

Water Res. 2015 Jan 1;68:849. doi: 10.1016/j.watres.2014.10.059. Epub 2014 Nov 12. No abstract available.

PMID:
25652395
29.

Microbiology. Breathing the unbreathable.

Edwards EA.

Science. 2014 Oct 24;346(6208):424-5. doi: 10.1126/science.1261194. No abstract available.

PMID:
25342788
30.

Anaerobic digestion of pulp and paper mill wastewater and sludge.

Meyer T, Edwards EA.

Water Res. 2014 Nov 15;65:321-49. doi: 10.1016/j.watres.2014.07.022. Epub 2014 Jul 24. Review. Erratum in: Water Res. 2015 Jan 1;68:849.

PMID:
25150519
31.

Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation.

Luo F, Gitiafroz R, Devine CE, Gong Y, Hug LA, Raskin L, Edwards EA.

Appl Environ Microbiol. 2014 Jul;80(14):4095-107. doi: 10.1128/AEM.00717-14. Epub 2014 May 2.

32.

New insights into Dehalococcoides mccartyi metabolism from a reconstructed metabolic network-based systems-level analysis of D. mccartyi transcriptomes.

Islam MA, Waller AS, Hug LA, Provart NJ, Edwards EA, Mahadevan R.

PLoS One. 2014 Apr 14;9(4):e94808. doi: 10.1371/journal.pone.0094808. eCollection 2014.

33.

Bioremediation of chlorinated ethenes in fractured bedrock and associated changes in dechlorinating and nondechlorinating microbial populations.

Pérez-de-Mora A, Zila A, McMaster ML, Edwards EA.

Environ Sci Technol. 2014 May 20;48(10):5770-9. doi: 10.1021/es404122y. Epub 2014 May 7.

PMID:
24724903
34.

Bioaugmentation with distinct Dehalobacter strains achieves chloroform detoxification in microcosms.

Justicia-Leon SD, Higgins S, Mack EE, Griffiths DR, Tang S, Edwards EA, Löffler FE.

Environ Sci Technol. 2014;48(3):1851-8. doi: 10.1021/es403582f. Epub 2014 Jan 15.

PMID:
24392834
35.

Complete Genome Sequence of Bacteroidales Strain CF from a Chloroform-Dechlorinating Enrichment Culture.

Tang S, Edwards EA.

Genome Announc. 2013 Dec 19;1(6). pii: e01066-13. doi: 10.1128/genomeA.01066-13.

36.

Diversity of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer PCR screens.

Hug LA, Edwards EA.

Front Microbiol. 2013 Nov 19;4:341. doi: 10.3389/fmicb.2013.00341. eCollection 2013. Erratum in: Front Microbiol. 2015;6:30.

37.

Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, st. Jacobs, ontario, Canada.

Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, Simonet P, Sjöling S, Smalla K, Streit WR, Tedman-Jones J, Valla S, Wellington EM, Wu CC, Liles MR, Neufeld JD, Sessitsch A, Charles TC.

Stand Genomic Sci. 2013 Apr 15;8(1):106-11. doi: 10.4056/sigs.3406845. eCollection 2013 Apr 15.

38.

Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases.

Hug LA, Maphosa F, Leys D, Löffler FE, Smidt H, Edwards EA, Adrian L.

Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120322. doi: 10.1098/rstb.2012.0322. Print 2013 Apr 19. Review.

39.

Identification of Dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane.

Tang S, Edwards EA.

Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120318. doi: 10.1098/rstb.2012.0318. Print 2013 Apr 19.

40.

Anaerobic conversion of chlorobenzene and benzene to CH4 and CO2 in bioaugmented microcosms.

Liang X, Devine CE, Nelson J, Sherwood Lollar B, Zinder S, Edwards EA.

Environ Sci Technol. 2013 Mar 5;47(5):2378-85. doi: 10.1021/es3043092. Epub 2013 Feb 14.

PMID:
23360185
41.

Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic data.

Tang S, Gong Y, Edwards EA.

PLoS One. 2012;7(12):e52038. doi: 10.1371/journal.pone.0052038. Epub 2012 Dec 21.

42.

Paediatric home ventilatory support: changing milieu, proactive solutions.

Edwards EA, Nixon GM; Australasian Paediatric Respiratory Group Working Party on Home Ventilation.

J Paediatr Child Health. 2013 Jan;49(1):13-8. doi: 10.1111/jpc.12040. Epub 2012 Dec 18. No abstract available.

PMID:
23252372
43.

Functional characterization of reductive dehalogenases by using blue native polyacrylamide gel electrophoresis.

Tang S, Chan WW, Fletcher KE, Seifert J, Liang X, Löffler FE, Edwards EA, Adrian L.

Appl Environ Microbiol. 2013 Feb;79(3):974-81. doi: 10.1128/AEM.01873-12. Epub 2012 Nov 30.

44.

Large carbon isotope fractionation during biodegradation of chloroform by Dehalobacter cultures.

Chan CC, Mundle SO, Eckert T, Liang X, Tang S, Lacrampe-Couloume G, Edwards EA, Lollar BS.

Environ Sci Technol. 2012 Sep 18;46(18):10154-60. doi: 10.1021/es3010317. Epub 2012 Aug 27.

PMID:
22900494
45.

Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating community.

Hug LA, Beiko RG, Rowe AR, Richardson RE, Edwards EA.

BMC Genomics. 2012 Jul 23;13:327. doi: 10.1186/1471-2164-13-327.

46.

Discovery of a trans-dichloroethene-respiring Dehalogenimonas species in the 1,1,2,2-tetrachloroethane-dechlorinating WBC-2 consortium.

Manchester MJ, Hug LA, Zarek M, Zila A, Edwards EA.

Appl Environ Microbiol. 2012 Aug;78(15):5280-7. doi: 10.1128/AEM.00384-12. Epub 2012 May 25.

47.

Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae.

Wagner DD, Hug LA, Hatt JK, Spitzmiller MR, Padilla-Crespo E, Ritalahti KM, Edwards EA, Konstantinidis KT, Löffler FE.

BMC Genomics. 2012 May 22;13:200. doi: 10.1186/1471-2164-13-200.

48.
49.

Application of time-of-flight-secondary ion mass spectrometry for the detection of enzyme activity on solid wood substrates.

Goacher RE, Edwards EA, Yakunin AF, Mims CA, Master ER.

Anal Chem. 2012 May 15;84(10):4443-51. doi: 10.1021/ac3005346. Epub 2012 Apr 26.

PMID:
22507179
50.

Monitoring biodegradation of ethene and bioremediation of chlorinated ethenes at a contaminated site using compound-specific isotope analysis (CSIA).

Mundle SO, Johnson T, Lacrampe-Couloume G, Pérez-de-Mora A, Duhamel M, Edwards EA, McMaster ML, Cox E, Révész K, Sherwood Lollar B.

Environ Sci Technol. 2012 Feb 7;46(3):1731-8. doi: 10.1021/es202792x. Epub 2012 Jan 19.

PMID:
22201221

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