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An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in Bradyrhizobium diazoefficiens.

Fernández N, Cabrera JJ, Varadarajan AR, Lutz S, Ledermann R, Roschitzki B, Eberl L, Bedmar EJ, Fischer HM, Pessi G, Ahrens CH, Mesa S.

Front Microbiol. 2019 May 7;10:924. doi: 10.3389/fmicb.2019.00924. eCollection 2019.


The Compound 2-Hexyl, 5-Propyl Resorcinol Has a Key Role in Biofilm Formation by the Biocontrol Rhizobacterium Pseudomonas chlororaphis PCL1606.

Calderón CE, Tienda S, Heredia-Ponce Z, Arrebola E, Cárcamo-Oyarce G, Eberl L, Cazorla FM.

Front Microbiol. 2019 Feb 28;10:396. doi: 10.3389/fmicb.2019.00396. eCollection 2019.


Bacterial Adhesion on Soft Materials: Passive Physicochemical Interactions or Active Bacterial Mechanosensing?

Straub H, Bigger CM, Valentin J, Abt D, Qin XH, Eberl L, Maniura-Weber K, Ren Q.

Adv Healthc Mater. 2019 Apr;8(8):e1801323. doi: 10.1002/adhm.201801323. Epub 2019 Feb 18.


Key Players and Individualists of Cyclic-di-GMP Signaling in Burkholderia cenocepacia.

Richter AM, Fazli M, Schmid N, Shilling R, Suppiger A, Givskov M, Eberl L, Tolker-Nielsen T.

Front Microbiol. 2019 Jan 10;9:3286. doi: 10.3389/fmicb.2018.03286. eCollection 2018.


Burkholderia cenocepacia utilizes a type VI secretion system for bacterial competition.

Spiewak HL, Shastri S, Zhang L, Schwager S, Eberl L, Vergunst AC, Thomas MS.

Microbiologyopen. 2019 Jan 9:e774. doi: 10.1002/mbo3.774. [Epub ahead of print]


Synthesis and Biological Evaluation of the Novel Growth Inhibitor Streptol Glucoside, Isolated from an Obligate Plant Symbiont.

Hsiao CC, Sieber S, Georgiou A, Bailly A, Emmanouilidou D, Carlier A, Eberl L, Gademann K.

Chemistry. 2019 Feb 1;25(7):1722-1726. doi: 10.1002/chem.201805693. Epub 2019 Jan 9.


The afc antifungal activity cluster, which is under tight regulatory control of ShvR, is essential for transition from intracellular persistence of Burkholderia cenocepacia to acute pro-inflammatory infection.

Gomes MC, Tasrini Y, Subramoni S, Agnoli K, Feliciano JR, Eberl L, Sokol P, O'Callaghan D, Vergunst AC.

PLoS Pathog. 2018 Dec 4;14(12):e1007473. doi: 10.1371/journal.ppat.1007473. eCollection 2018 Dec.


Antibiotics Stimulate Formation of Vesicles in Staphylococcus aureus in both Phage-Dependent and -Independent Fashions and via Different Routes.

Andreoni F, Toyofuku M, Menzi C, Kalawong R, Mairpady Shambat S, François P, Zinkernagel AS, Eberl L.

Antimicrob Agents Chemother. 2019 Jan 29;63(2). pii: e01439-18. doi: 10.1128/AAC.01439-18. Print 2019 Feb.


Thanatin targets the intermembrane protein complex required for lipopolysaccharide transport in Escherichia coli.

Vetterli SU, Zerbe K, Müller M, Urfer M, Mondal M, Wang SY, Moehle K, Zerbe O, Vitale A, Pessi G, Eberl L, Wollscheid B, Robinson JA.

Sci Adv. 2018 Nov 14;4(11):eaau2634. doi: 10.1126/sciadv.aau2634. eCollection 2018 Nov.


Types and origins of bacterial membrane vesicles.

Toyofuku M, Nomura N, Eberl L.

Nat Rev Microbiol. 2019 Jan;17(1):13-24. doi: 10.1038/s41579-018-0112-2. Review.


Involvement of Burkholderiaceae and sulfurous volatiles in disease-suppressive soils.

Carrión VJ, Cordovez V, Tyc O, Etalo DW, de Bruijn I, de Jager VCL, Medema MH, Eberl L, Raaijmakers JM.

ISME J. 2018 Sep;12(9):2307-2321. doi: 10.1038/s41396-018-0186-x. Epub 2018 Jun 13.


Biosynthesis of fragin is controlled by a novel quorum sensing signal.

Jenul C, Sieber S, Daeppen C, Mathew A, Lardi M, Pessi G, Hoepfner D, Neuburger M, Linden A, Gademann K, Eberl L.

Nat Commun. 2018 Mar 30;9(1):1297. doi: 10.1038/s41467-018-03690-2.


Leaf nodule symbiosis: function and transmission of obligate bacterial endophytes.

Pinto-Carbó M, Gademann K, Eberl L, Carlier A.

Curr Opin Plant Biol. 2018 Aug;44:23-31. doi: 10.1016/j.pbi.2018.01.001. Epub 2018 Feb 14. Review.


Mutations in Two Paraburkholderia phymatum Type VI Secretion Systems Cause Reduced Fitness in Interbacterial Competition.

de Campos SB, Lardi M, Gandolfi A, Eberl L, Pessi G.

Front Microbiol. 2017 Dec 12;8:2473. doi: 10.3389/fmicb.2017.02473. eCollection 2017.


Heterologous Expression, Biosynthetic Studies, and Ecological Function of the Selective Gq-Signaling Inhibitor FR900359.

Crüsemann M, Reher R, Schamari I, Brachmann AO, Ohbayashi T, Kuschak M, Malfacini D, Seidinger A, Pinto-Carbó M, Richarz R, Reuter T, Kehraus S, Hallab A, Attwood M, Schiöth HB, Mergaert P, Kikuchi Y, Schäberle TF, Kostenis E, Wenzel D, Müller CE, Piel J, Carlier A, Eberl L, König GM.

Angew Chem Int Ed Engl. 2018 Jan 15;57(3):836-840. doi: 10.1002/anie.201707996. Epub 2017 Dec 20.


Identification of AHL- and BDSF-Controlled Proteins in Burkholderia cenocepacia by Proteomics.

Liu Y, Pessi G, Riedel K, Eberl L.

Methods Mol Biol. 2018;1673:193-202. doi: 10.1007/978-1-4939-7309-5_15.


Prophage-triggered membrane vesicle formation through peptidoglycan damage in Bacillus subtilis.

Toyofuku M, Cárcamo-Oyarce G, Yamamoto T, Eisenstein F, Hsiao CC, Kurosawa M, Gademann K, Pilhofer M, Nomura N, Eberl L.

Nat Commun. 2017 Sep 7;8(1):481. doi: 10.1038/s41467-017-00492-w.


Competition Experiments for Legume Infection Identify Burkholderia phymatum as a Highly Competitive β-Rhizobium.

Lardi M, de Campos SB, Purtschert G, Eberl L, Pessi G.

Front Microbiol. 2017 Aug 15;8:1527. doi: 10.3389/fmicb.2017.01527. eCollection 2017.


The Essential Genome of Burkholderia cenocepacia H111.

Higgins S, Sanchez-Contreras M, Gualdi S, Pinto-Carbó M, Carlier A, Eberl L.

J Bacteriol. 2017 Oct 17;199(22). pii: e00260-17. doi: 10.1128/JB.00260-17. Print 2017 Nov 15.


Draft Genome Sequence of Cronobacter sakazakii GP1999, Sequence Type 145, an Epiphytic Isolate Obtained from the Tomato's Rhizoplane/Rhizosphere Continuum.

Chase HR, Eberl L, Stephan R, Jeong H, Lee C, Finkelstein S, Negrete F, Gangiredla J, Patel I, Tall BD, Gopinath GR, Lehner A.

Genome Announc. 2017 Aug 3;5(31). pii: e00723-17. doi: 10.1128/genomeA.00723-17.


NtrC-dependent control of exopolysaccharide synthesis and motility in Burkholderia cenocepacia H111.

Liu Y, Lardi M, Pedrioli A, Eberl L, Pessi G.

PLoS One. 2017 Jun 29;12(6):e0180362. doi: 10.1371/journal.pone.0180362. eCollection 2017.


High intracellular c-di-GMP levels antagonize quorum sensing and virulence gene expression in Burkholderia cenocepacia H111.

Schmid N, Suppiger A, Steiner E, Pessi G, Kaever V, Fazli M, Tolker-Nielsen T, Jenal U, Eberl L.

Microbiology. 2017 May;163(5):754-764. doi: 10.1099/mic.0.000452. Epub 2017 May 3.


Use of Synthetic Hybrid Strains To Determine the Role of Replicon 3 in Virulence of the Burkholderia cepacia Complex.

Agnoli K, Freitag R, Gomes MC, Jenul C, Suppiger A, Mannweiler O, Frauenknecht C, Janser D, Vergunst AC, Eberl L.

Appl Environ Microbiol. 2017 Jun 16;83(13). pii: e00461-17. doi: 10.1128/AEM.00461-17. Print 2017 Jul 1.


Regulation of Burkholderia cenocepacia biofilm formation by RpoN and the c-di-GMP effector BerB.

Fazli M, Rybtke M, Steiner E, Weidel E, Berthelsen J, Groizeleau J, Bin W, Zhi BZ, Yaming Z, Kaever V, Givskov M, Hartmann RW, Eberl L, Tolker-Nielsen T.

Microbiologyopen. 2017 Aug;6(4). doi: 10.1002/mbo3.480. Epub 2017 Apr 16.


Membrane vesicle-mediated bacterial communication.

Toyofuku M, Morinaga K, Hashimoto Y, Uhl J, Shimamura H, Inaba H, Schmitt-Kopplin P, Eberl L, Nomura N.

ISME J. 2017 Jun;11(6):1504-1509. doi: 10.1038/ismej.2017.13. Epub 2017 Mar 10.


Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis.

Carlier A, Cnockaert M, Fehr L, Vandamme P, Eberl L.

Syst Appl Microbiol. 2017 Jan;40(1):11-21. doi: 10.1016/j.syapm.2016.10.002. Epub 2016 Nov 24.


Functional Silver-Silicone-Nanofilament-Composite Material for Water Disinfection.

Meier M, Suppiger A, Eberl L, Seeger S.

Small. 2017 Jan;13(4). doi: 10.1002/smll.201601072. Epub 2016 Sep 13.


Members of the genus Burkholderia: good and bad guys.

Eberl L, Vandamme P.

F1000Res. 2016 May 26;5. pii: F1000 Faculty Rev-1007. doi: 10.12688/f1000research.8221.1. eCollection 2016. Review.


Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms.

Turnbull L, Toyofuku M, Hynen AL, Kurosawa M, Pessi G, Petty NK, Osvath SR, Cárcamo-Oyarce G, Gloag ES, Shimoni R, Omasits U, Ito S, Yap X, Monahan LG, Cavaliere R, Ahrens CH, Charles IG, Nomura N, Eberl L, Whitchurch CB.

Nat Commun. 2016 Apr 14;7:11220. doi: 10.1038/ncomms11220.


Evidence of horizontal gene transfer between obligate leaf nodule symbionts.

Pinto-Carbó M, Sieber S, Dessein S, Wicker T, Verstraete B, Gademann K, Eberl L, Carlier A.

ISME J. 2016 Sep;10(9):2092-105. doi: 10.1038/ismej.2016.27. Epub 2016 Mar 15.


The DSF type quorum sensing signalling system RpfF/R regulates diverse phenotypes in the opportunistic pathogen Cronobacter.

Suppiger A, Eshwar AK, Stephan R, Kaever V, Eberl L, Lehner A.

Sci Rep. 2016 Jan 4;6:18753. doi: 10.1038/srep18753.


The genome analysis of Candidatus Burkholderia crenata reveals that secondary metabolism may be a key function of the Ardisia crenata leaf nodule symbiosis.

Carlier A, Fehr L, Pinto-Carbó M, Schäberle T, Reher R, Dessein S, König G, Eberl L.

Environ Microbiol. 2016 Sep;18(8):2507-22. doi: 10.1111/1462-2920.13184. Epub 2016 Jan 21.


A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli.

Urfer M, Bogdanovic J, Lo Monte F, Moehle K, Zerbe K, Omasits U, Ahrens CH, Pessi G, Eberl L, Robinson JA.

J Biol Chem. 2016 Jan 22;291(4):1921-32. doi: 10.1074/jbc.M115.691725. Epub 2015 Dec 1.


The role of siderophores in metal homeostasis of members of the genus Burkholderia.

Mathew A, Jenul C, Carlier AL, Eberl L.

Environ Microbiol Rep. 2016 Feb;8(1):103-9. doi: 10.1111/1758-2229.12357. Epub 2016 Jan 22.


Evidence for the widespread production of DSF family signal molecules by members of the genus Burkholderia by the aid of novel biosensors.

Suppiger A, Aguilar C, Eberl L.

Environ Microbiol Rep. 2016 Feb;8(1):38-44. doi: 10.1111/1758-2229.12348. Epub 2016 Jan 7.


Isolation and Total Synthesis of Kirkamide, an Aminocyclitol from an Obligate Leaf Nodule Symbiont.

Sieber S, Carlier A, Neuburger M, Grabenweger G, Eberl L, Gademann K.

Angew Chem Int Ed Engl. 2015 Jun 26;54(27):7968-70. doi: 10.1002/anie.201502696. Epub 2015 Jun 1.


Molecular mechanisms underlying the close association between soil Burkholderia and fungi.

Stopnisek N, Zühlke D, Carlier A, Barberán A, Fierer N, Becher D, Riedel K, Eberl L, Weisskopf L.

ISME J. 2016 Jan;10(1):253-64. doi: 10.1038/ismej.2015.73. Epub 2015 May 19.


Integrated whole-genome screening for Pseudomonas aeruginosa virulence genes using multiple disease models reveals that pathogenicity is host specific.

Dubern JF, Cigana C, De Simone M, Lazenby J, Juhas M, Schwager S, Bianconi I, Döring G, Eberl L, Williams P, Bragonzi A, Cámara M.

Environ Microbiol. 2015 Nov;17(11):4379-93. doi: 10.1111/1462-2920.12863. Epub 2015 May 14.


σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111.

Lardi M, Aguilar C, Pedrioli A, Omasits U, Suppiger A, Cárcamo-Oyarce G, Schmid N, Ahrens CH, Eberl L, Pessi G.

Appl Environ Microbiol. 2015 Jun 15;81(12):4077-89. doi: 10.1128/AEM.00694-15. Epub 2015 Apr 3.


Quorum sensing triggers the stochastic escape of individual cells from Pseudomonas putida biofilms.

Cárcamo-Oyarce G, Lumjiaktase P, Kümmerli R, Eberl L.

Nat Commun. 2015 Jan 16;6:5945. doi: 10.1038/ncomms6945.


The inter-kingdom volatile signal indole promotes root development by interfering with auxin signalling.

Bailly A, Groenhagen U, Schulz S, Geisler M, Eberl L, Weisskopf L.

Plant J. 2014 Dec;80(5):758-71. doi: 10.1111/tpj.12666. Epub 2014 Oct 14.


Genome Sequence of Burkholderia cenocepacia H111, a Cystic Fibrosis Airway Isolate.

Carlier A, Agnoli K, Pessi G, Suppiger A, Jenul C, Schmid N, Tümmler B, Pinto-Carbo M, Eberl L.

Genome Announc. 2014 Apr 10;2(2). pii: e00298-14. doi: 10.1128/genomeA.00298-14.


The IclR-family regulator BapR controls biofilm formation in B. cenocepacia H111.

Aguilar C, Schmid N, Lardi M, Pessi G, Eberl L.

PLoS One. 2014 Mar 21;9(3):e92920. doi: 10.1371/journal.pone.0092920. eCollection 2014.


Regulation of biofilm formation in Pseudomonas and Burkholderia species.

Fazli M, Almblad H, Rybtke ML, Givskov M, Eberl L, Tolker-Nielsen T.

Environ Microbiol. 2014 Jul;16(7):1961-81. doi: 10.1111/1462-2920.12448. Epub 2014 Mar 31. Review.


Oxalotrophy, a widespread trait of plant-associated Burkholderia species, is involved in successful root colonization of lupin and maize by Burkholderia phytofirmans.

Kost T, Stopnisek N, Agnoli K, Eberl L, Weisskopf L.

Front Microbiol. 2014 Jan 9;4:421. doi: 10.3389/fmicb.2013.00421. eCollection 2014.


A novel siderophore-independent strategy of iron uptake in the genus Burkholderia.

Mathew A, Eberl L, Carlier AL.

Mol Microbiol. 2014 Feb;91(4):805-20. doi: 10.1111/mmi.12499. Epub 2014 Jan 13.


The third replicon of members of the Burkholderia cepacia Complex, plasmid pC3, plays a role in stress tolerance.

Agnoli K, Frauenknecht C, Freitag R, Schwager S, Jenul C, Vergunst A, Carlier A, Eberl L.

Appl Environ Microbiol. 2014 Feb;80(4):1340-8. doi: 10.1128/AEM.03330-13. Epub 2013 Dec 13.


Response of Burkholderia cenocepacia H111 to micro-oxia.

Pessi G, Braunwalder R, Grunau A, Omasits U, Ahrens CH, Eberl L.

PLoS One. 2013 Sep 2;8(9):e72939. doi: 10.1371/journal.pone.0072939. eCollection 2013.


Bioinspired surfaces against bacterial infections.

Gomes J, Grunau A, Lawrence AK, Eberl L, Gademann K.

Chimia (Aarau). 2013;67(4):275-8.


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