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Phasing in heterochromatin during development.

Armstrong RL, Duronio RJ.

Genes Dev. 2019 Apr 1;33(7-8):379-381. doi: 10.1101/gad.324731.119.


H3K9 Promotes Under-Replication of Pericentromeric Heterochromatin in Drosophila Salivary Gland Polytene Chromosomes.

Armstrong RL, Penke TJR, Chao SK, Gentile GM, Strahl BD, Matera AG, McKay DJ, Duronio RJ.

Genes (Basel). 2019 Jan 29;10(2). pii: E93. doi: 10.3390/genes10020093.


Lysine 27 of replication-independent histone H3.3 is required for Polycomb target gene silencing but not for gene activation.

Leatham-Jensen M, Uyehara CM, Strahl BD, Matera AG, Duronio RJ, McKay DJ.

PLoS Genet. 2019 Jan 30;15(1):e1007932. doi: 10.1371/journal.pgen.1007932. eCollection 2019 Jan.


The many fates of tissue regeneration.

Abdullah C, Duronio RJ.

PLoS Genet. 2018 Nov 21;14(11):e1007728. doi: 10.1371/journal.pgen.1007728. eCollection 2018 Nov. No abstract available.


Chromatin conformation and transcriptional activity are permissive regulators of DNA replication initiation in Drosophila.

Armstrong RL, Penke TJR, Strahl BD, Matera AG, McKay DJ, MacAlpine DM, Duronio RJ.

Genome Res. 2018 Nov;28(11):1688-1700. doi: 10.1101/gr.239913.118. Epub 2018 Oct 2.


An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters.

Meers MP, Leatham-Jensen M, Penke TJR, McKay DJ, Duronio RJ, Matera AG.

Methods Mol Biol. 2018;1832:309-325. doi: 10.1007/978-1-4939-8663-7_17.


Transcription start site profiling uncovers divergent transcription and enhancer-associated RNAs in Drosophila melanogaster.

Meers MP, Adelman K, Duronio RJ, Strahl BD, McKay DJ, Matera AG.

BMC Genomics. 2018 Feb 21;19(1):157. doi: 10.1186/s12864-018-4510-7.


Sophisticated lessons from simple organisms: appreciating the value of curiosity-driven research.

Duronio RJ, O'Farrell PH, Sluder G, Su TT.

Dis Model Mech. 2017 Dec 19;10(12):1381-1389. doi: 10.1242/dmm.031203. Review.


Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in Drosophila.

Penke TJR, McKay DJ, Strahl BD, Matera AG, Duronio RJ.

Genetics. 2018 Jan;208(1):229-244. doi: 10.1534/genetics.117.300480. Epub 2017 Nov 13.


Histone locus regulation by the Drosophila dosage compensation adaptor protein CLAMP.

Rieder LE, Koreski KP, Boltz KA, Kuzu G, Urban JA, Bowman SK, Zeidman A, Jordan WT 3rd, Tolstorukov MY, Marzluff WF, Duronio RJ, Larschan EN.

Genes Dev. 2017 Jul 15;31(14):1494-1508. doi: 10.1101/gad.300855.117. Epub 2017 Aug 24.


A population of G2-arrested cells are selected as sensory organ precursors for the interommatidial bristles of the Drosophila eye.

Meserve JH, Duronio RJ.

Dev Biol. 2017 Oct 15;430(2):374-384. doi: 10.1016/j.ydbio.2017.06.023. Epub 2017 Jun 21.


Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity.

Meers MP, Henriques T, Lavender CA, McKay DJ, Strahl BD, Duronio RJ, Adelman K, Matera AG.

Elife. 2017 Mar 27;6. pii: e23249. doi: 10.7554/eLife.23249.


Coordinating cell cycle-regulated histone gene expression through assembly and function of the Histone Locus Body.

Duronio RJ, Marzluff WF.

RNA Biol. 2017 Jun 3;14(6):726-738. doi: 10.1080/15476286.2016.1265198. Epub 2017 Jan 6. Review.


Direct interrogation of the role of H3K9 in metazoan heterochromatin function.

Penke TJ, McKay DJ, Strahl BD, Matera AG, Duronio RJ.

Genes Dev. 2016 Aug 15;30(16):1866-80. doi: 10.1101/gad.286278.116. Epub 2016 Aug 26.


Concentrating pre-mRNA processing factors in the histone locus body facilitates efficient histone mRNA biogenesis.

Tatomer DC, Terzo E, Curry KP, Salzler H, Sabath I, Zapotoczny G, McKay DJ, Dominski Z, Marzluff WF, Duronio RJ.

J Cell Biol. 2016 Jun 6;213(5):557-70. doi: 10.1083/jcb.201504043. Epub 2016 May 30.


Methylation of histone H4 lysine 20 by PR-Set7 ensures the integrity of late replicating sequence domains in Drosophila.

Li Y, Armstrong RL, Duronio RJ, MacAlpine DM.

Nucleic Acids Res. 2016 Sep 6;44(15):7204-18. doi: 10.1093/nar/gkw333. Epub 2016 Apr 29.


Expression of an S phase-stabilized version of the CDK inhibitor Dacapo can alter endoreplication.

Swanson CI, Meserve JH, McCarter PC, Thieme A, Mathew T, Elston TC, Duronio RJ.

Development. 2015 Dec 15;142(24):4288-98. doi: 10.1242/dev.115006. Epub 2015 Oct 22.


Scalloped and Yorkie are required for cell cycle re-entry of quiescent cells after tissue damage.

Meserve JH, Duronio RJ.

Development. 2015 Aug 15;142(16):2740-51. doi: 10.1242/dev.119339. Epub 2015 Jul 9.


EnD-Seq and AppEnD: sequencing 3' ends to identify nontemplated tails and degradation intermediates.

Welch JD, Slevin MK, Tatomer DC, Duronio RJ, Prins JF, Marzluff WF.

RNA. 2015 Jul;21(7):1375-89. doi: 10.1261/rna.048785.114. Epub 2015 May 26.


Distinct self-interaction domains promote Multi Sex Combs accumulation in and formation of the Drosophila histone locus body.

Terzo EA, Lyons SM, Poulton JS, Temple BR, Marzluff WF, Duronio RJ.

Mol Biol Cell. 2015 Apr 15;26(8):1559-74. doi: 10.1091/mbc.E14-10-1445. Epub 2015 Feb 18. Erratum in: Mol Biol Cell. 2015 Jul 1;26(13):2574.


Interrogating the function of metazoan histones using engineered gene clusters.

McKay DJ, Klusza S, Penke TJ, Meers MP, Curry KP, McDaniel SL, Malek PY, Cooper SW, Tatomer DC, Lieb JD, Strahl BD, Duronio RJ, Matera AG.

Dev Cell. 2015 Feb 9;32(3):373-86. doi: 10.1016/j.devcel.2014.12.025.


Drosophila Symplekin localizes dynamically to the histone locus body and tricellular junctions.

Tatomer DC, Rizzardi LF, Curry KP, Witkowski AM, Marzluff WF, Duronio RJ.

Nucleus. 2014;5(6):613-25. doi: 10.4161/19491034.2014.990860.


Genome stress response in early development.

Marzluff WF, Duronio RJ.

Dev Cell. 2014 May 27;29(4):375-6. doi: 10.1016/j.devcel.2014.05.010.


A sequence in the Drosophila H3-H4 Promoter triggers histone locus body assembly and biosynthesis of replication-coupled histone mRNAs.

Salzler HR, Tatomer DC, Malek PY, McDaniel SL, Orlando AN, Marzluff WF, Duronio RJ.

Dev Cell. 2013 Mar 25;24(6):623-34. doi: 10.1016/j.devcel.2013.02.014.


Signaling pathways that control cell proliferation.

Duronio RJ, Xiong Y.

Cold Spring Harb Perspect Biol. 2013 Mar 1;5(3):a008904. doi: 10.1101/cshperspect.a008904. Review.


Endoreplication and polyploidy: insights into development and disease.

Fox DT, Duronio RJ.

Development. 2013 Jan 1;140(1):3-12. doi: 10.1242/dev.080531. Review.


Atypical E2Fs drive atypical cell cycles.

Meserve JH, Duronio RJ.

Nat Cell Biol. 2012 Nov;14(11):1124-5. doi: 10.1038/ncb2609.


S phase-coupled E2f1 destruction ensures homeostasis in proliferating tissues.

Davidson JM, Duronio RJ.

PLoS Genet. 2012;8(8):e1002831. doi: 10.1371/journal.pgen.1002831. Epub 2012 Aug 16.


Characterization of null and hypomorphic alleles of the Drosophila l(2)dtl/cdt2 gene: Larval lethality and male fertility.

Sloan RS, Swanson CI, Gavilano L, Smith KN, Malek PY, Snow-Smith M, Duronio RJ, Key SC.

Fly (Austin). 2012 Jul-Sep;6(3):173-83. doi: 10.4161/fly.20247. Epub 2012 Jun 22.


Developing S-phase control.

Duronio RJ.

Genes Dev. 2012 Apr 15;26(8):746-50. doi: 10.1101/gad.191171.112.


Control of Drosophila endocycles by E2F and CRL4(CDT2).

Zielke N, Kim KJ, Tran V, Shibutani ST, Bravo MJ, Nagarajan S, van Straaten M, Woods B, von Dassow G, Rottig C, Lehner CF, Grewal SS, Duronio RJ, Edgar BA.

Nature. 2011 Oct 30;480(7375):123-7. doi: 10.1038/nature10579.


Using Drosophila S2 cells to measure S phase-coupled protein destruction via flow cytometry.

Davidson JM, Duronio RJ.

Methods Mol Biol. 2011;782:205-19. doi: 10.1007/978-1-61779-273-1_15.


Drosophila histone locus bodies form by hierarchical recruitment of components.

White AE, Burch BD, Yang XC, Gasdaska PY, Dominski Z, Marzluff WF, Duronio RJ.

J Cell Biol. 2011 May 16;193(4):677-94. doi: 10.1083/jcb.201012077.


Interaction between FLASH and Lsm11 is essential for histone pre-mRNA processing in vivo in Drosophila.

Burch BD, Godfrey AC, Gasdaska PY, Salzler HR, Duronio RJ, Marzluff WF, Dominski Z.

RNA. 2011 Jun;17(6):1132-47. doi: 10.1261/rna.2566811. Epub 2011 Apr 27.


Developmental regulation of replication-coupled protein destruction.

Swanson CI, Duronio RJ.

Cell Cycle. 2011 Mar 15;10(6):859-60. Epub 2011 Mar 15. No abstract available.


Cell type-dependent requirement for PIP box-regulated Cdt1 destruction during S phase.

Lee HO, Zacharek SJ, Xiong Y, Duronio RJ.

Mol Biol Cell. 2010 Nov 1;21(21):3639-53. doi: 10.1091/mbc.E10-02-0130. Epub 2010 Sep 8.


Loss of the histone pre-mRNA processing factor stem-loop binding protein in Drosophila causes genomic instability and impaired cellular proliferation.

Salzler HR, Davidson JM, Montgomery ND, Duronio RJ.

PLoS One. 2009 Dec 4;4(12):e8168. doi: 10.1371/journal.pone.0008168.


Endoreplication: polyploidy with purpose.

Lee HO, Davidson JM, Duronio RJ.

Genes Dev. 2009 Nov 1;23(21):2461-77. doi: 10.1101/gad.1829209. Review.


The Drosophila U7 snRNP proteins Lsm10 and Lsm11 are required for histone pre-mRNA processing and play an essential role in development.

Godfrey AC, White AE, Tatomer DC, Marzluff WF, Duronio RJ.

RNA. 2009 Sep;15(9):1661-72. doi: 10.1261/rna.1518009. Epub 2009 Jul 20.


Intrinsic negative cell cycle regulation provided by PIP box- and Cul4Cdt2-mediated destruction of E2f1 during S phase.

Shibutani ST, de la Cruz AF, Tran V, Turbyfill WJ 3rd, Reis T, Edgar BA, Duronio RJ.

Dev Cell. 2008 Dec;15(6):890-900. doi: 10.1016/j.devcel.2008.10.003.


Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail.

Marzluff WF, Wagner EJ, Duronio RJ.

Nat Rev Genet. 2008 Nov;9(11):843-54. doi: 10.1038/nrg2438. Review.


Cdt1 and Cdc6 are destabilized by rereplication-induced DNA damage.

Hall JR, Lee HO, Bunker BD, Dorn ES, Rogers GC, Duronio RJ, Cook JG.

J Biol Chem. 2008 Sep 12;283(37):25356-63. doi: 10.1074/jbc.M802667200. Epub 2008 Jul 10.


WD40 protein FBW5 promotes ubiquitination of tumor suppressor TSC2 by DDB1-CUL4-ROC1 ligase.

Hu J, Zacharek S, He YJ, Lee H, Shumway S, Duronio RJ, Xiong Y.

Genes Dev. 2008 Apr 1;22(7):866-71. doi: 10.1101/gad.1624008.


A genome-wide RNA interference screen reveals that variant histones are necessary for replication-dependent histone pre-mRNA processing.

Wagner EJ, Burch BD, Godfrey AC, Salzler HR, Duronio RJ, Marzluff WF.

Mol Cell. 2007 Nov 30;28(4):692-9.


Normal regulation of Rbf1/E2f1 target genes in Drosophila type 1 protein phosphatase mutants.

Swanhart LM, Sanders AN, Duronio RJ.

Dev Dyn. 2007 Sep;236(9):2567-77.


Developmental and cell cycle regulation of the Drosophila histone locus body.

White AE, Leslie ME, Calvi BR, Marzluff WF, Duronio RJ.

Mol Biol Cell. 2007 Jul;18(7):2491-502. Epub 2007 Apr 18.


Rbf1-independent termination of E2f1-target gene expression during early Drosophila embryogenesis.

Shibutani S, Swanhart LM, Duronio RJ.

Development. 2007 Feb;134(3):467-78. Epub 2006 Dec 21.


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