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Items: 1 to 50 of 111

1.

Heart failure with preserved ejection fraction in the elderly: pathophysiology, diagnostic and therapeutic approach.

Duque ER, Briasoulis A, Alvarez PA.

J Geriatr Cardiol. 2019 May;16(5):421-428. doi: 10.11909/j.issn.1671-5411.2019.05.009. Review.

2.

Twenty-first-century chemical odyssey: fuels versus commodities and cell factories versus chemical plants.

Ramos JL, Duque E.

Microb Biotechnol. 2019 Mar;12(2):200-209. doi: 10.1111/1751-7915.13379. Epub 2019 Feb 22. Review.

3.

Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.

Duque E, Daddaoua A, Cordero BF, Udaondo Z, Molina-Santiago C, Roca A, Solano J, Molina-Alcaide E, Segura A, Ramos JL.

Microb Biotechnol. 2018 Jul;11(4):781-787. doi: 10.1111/1751-7915.13269. Epub 2018 Apr 17.

4.

Numerical realization of the variational method for generating self-trapped beams.

Duque EI, Lopez-Aguayo S, Malomed BA.

Opt Express. 2018 Mar 19;26(6):7451-7459. doi: 10.1364/OE.26.007451.

PMID:
29609299
5.

Identification and elucidation of in vivo function of two alanine racemases from Pseudomonas putida KT2440.

Duque E, Daddaoua A, Cordero BF, De la Torre J, Antonia Molina-Henares M, Ramos JL.

Environ Microbiol Rep. 2017 Oct;9(5):581-588. doi: 10.1111/1758-2229.12576. Epub 2017 Sep 21.

PMID:
28799718
6.

Green biofuels and bioproducts: bases for sustainability analysis.

Ramos JL, García-Lorente F, Valdivia M, Duque E.

Microb Biotechnol. 2017 Sep;10(5):1111-1113. doi: 10.1111/1751-7915.12768. Epub 2017 Jul 17. Review. No abstract available.

7.

The pangenome of the genus Clostridium.

Udaondo Z, Duque E, Ramos JL.

Environ Microbiol. 2017 Jul;19(7):2588-2603. doi: 10.1111/1462-2920.13732. Epub 2017 May 29.

PMID:
28321969
8.

Pseudomonas putida as a platform for the synthesis of aromatic compounds.

Molina-Santiago C, Cordero BF, Daddaoua A, Udaondo Z, Manzano J, Valdivia M, Segura A, Ramos JL, Duque E.

Microbiology. 2016 Sep;162(9):1535-1543. doi: 10.1099/mic.0.000333. Epub 2016 Jul 14.

PMID:
27417954
9.

Genetic and functional characterization of a novel meta-pathway for degradation of naringenin in Herbaspirillum seropedicae SmR1.

Maria Marin A, de la Torre J, Ricardo Marques Oliveira A, Barison A, Satie Chubatsu L, Adele Monteiro R, de Oliveira Pedrosa F, Maltempi de Souza E, Wassem R, Duque E, Ramos JL.

Environ Microbiol. 2016 Dec;18(12):4653-4661. doi: 10.1111/1462-2920.13313. Epub 2016 Apr 30.

PMID:
27059806
10.

Understanding butanol tolerance and assimilation in Pseudomonas putida BIRD-1: an integrated omics approach.

Cuenca Mdel S, Roca A, Molina-Santiago C, Duque E, Armengaud J, Gómez-Garcia MR, Ramos JL.

Microb Biotechnol. 2016 Jan;9(1):100-15. doi: 10.1111/1751-7915.12328.

11.

Specific Gene Loci of Clinical Pseudomonas putida Isolates.

Molina L, Udaondo Z, Duque E, Fernández M, Bernal P, Roca A, de la Torre J, Ramos JL.

PLoS One. 2016 Jan 28;11(1):e0147478. doi: 10.1371/journal.pone.0147478. eCollection 2016.

12.

First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.

Ramos JL, Udaondo Z, Fernández B, Molina C, Daddaoua A, Segura A, Duque E.

Microb Biotechnol. 2016 Jan;9(1):8-10. doi: 10.1111/1751-7915.12333. Epub 2015 Dec 7. No abstract available.

13.

Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains.

Fernández M, Porcel M, de la Torre J, Molina-Henares MA, Daddaoua A, Llamas MA, Roca A, Carriel V, Garzón I, Ramos JL, Alaminos M, Duque E.

Front Microbiol. 2015 Aug 25;6:871. doi: 10.3389/fmicb.2015.00871. eCollection 2015.

14.

Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.

Pascual J, Udaondo Z, Molina L, Segura A, Esteve-Núñez A, Caballero A, Duque E, Ramos JL, van Dillewijn P.

Genome Announc. 2015 Sep 3;3(5). pii: e00904-15. doi: 10.1128/genomeA.00904-15.

15.

Analysis of the core genome and pangenome of Pseudomonas putida.

Udaondo Z, Molina L, Segura A, Duque E, Ramos JL.

Environ Microbiol. 2016 Oct;18(10):3268-3283. doi: 10.1111/1462-2920.13015. Epub 2015 Sep 16.

PMID:
26261031
16.

Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.

Ramos JL, Sol Cuenca M, Molina-Santiago C, Segura A, Duque E, Gómez-García MR, Udaondo Z, Roca A.

FEMS Microbiol Rev. 2015 Jul;39(4):555-66. doi: 10.1093/femsre/fuv006. Epub 2015 Apr 30. Review.

PMID:
25934123
17.

Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.

Fernández M, Udaondo Z, Niqui JL, Duque E, Ramos JL.

Environ Microbiol Rep. 2014 Oct;6(5):483-9.

PMID:
25646541
18.

Contribution of arbuscular mycorrhizal fungi and/or bacteria to enhancing plant drought tolerance under natural soil conditions: effectiveness of autochthonous or allochthonous strains.

Ortiz N, Armada E, Duque E, Roldán A, Azcón R.

J Plant Physiol. 2015 Feb 1;174:87-96. doi: 10.1016/j.jplph.2014.08.019. Epub 2014 Oct 20.

PMID:
25462971
19.

Restoration of a Mediterranean forest after a fire: bioremediation and rhizoremediation field-scale trial.

Pizarro-Tobías P, Fernández M, Niqui JL, Solano J, Duque E, Ramos JL, Roca A.

Microb Biotechnol. 2015 Jan;8(1):77-92. doi: 10.1111/1751-7915.12138. Epub 2014 Jul 31.

20.

Comparative study of open abdomen treatment: ABThera™ vs. abdominal dressing™.

Olona C, Caro A, Duque E, Moreno F, Vadillo J, Rueda JC, Vicente V.

Hernia. 2015 Apr;19(2):323-8. doi: 10.1007/s10029-014-1253-5. Epub 2014 Apr 23.

PMID:
24756917
21.

Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.

Molina L, Udaondo Z, Duque E, Fernández M, Molina-Santiago C, Roca A, Porcel M, de la Torre J, Segura A, Plesiat P, Jeannot K, Ramos JL.

PLoS One. 2014 Jan 17;9(1):e81604. doi: 10.1371/journal.pone.0081604. eCollection 2014.

22.

Negative-pressure therapy in the postoperative treatment of incisional hernioplasty wounds: a pilot study.

Olona C, Duque E, Caro A, Jiménez A, Moreno F, Coronas JM, Vicente V.

Adv Skin Wound Care. 2014 Feb;27(2):77-80. doi: 10.1097/01.ASW.0000442873.48590.b5.

PMID:
24440865
23.

Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance.

Molina-Santiago C, Daddaoua A, Fillet S, Duque E, Ramos JL.

Environ Microbiol. 2014 May;16(5):1267-81. doi: 10.1111/1462-2920.12368. Epub 2014 Jan 23.

PMID:
24373097
24.

[Preoperative blood ordering in elective colon surgery: requirement or routine?].

Feliu F, Rueda JC, Ramiro L, Olona M, Escuder J, Gris F, Jiménez A, Duque E, Vicente V.

Cir Esp. 2014 Jan;92(1):44-51. doi: 10.1016/j.ciresp.2013.05.011. Epub 2013 Dec 4. Spanish.

PMID:
24314610
25.

Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor.

Molina-Santiago C, Daddaoua A, Fillet S, Krell T, Morel B, Duque E, Ramos JL.

J Bacteriol. 2014 Feb;196(3):588-94. doi: 10.1128/JB.00589-13. Epub 2013 Nov 15.

26.

Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.

Udaondo Z, Molina L, Daniels C, Gómez MJ, Molina-Henares MA, Matilla MA, Roca A, Fernández M, Duque E, Segura A, Ramos JL.

Microb Biotechnol. 2013 Sep;6(5):598-611. doi: 10.1111/1751-7915.12061. Epub 2013 Jul 1.

27.

The Pseudomonas putida HskA hybrid sensor kinase controls the composition of the electron transport chain.

Sevilla E, Silva-Jiménez H, Duque E, Krell T, Rojo F.

Environ Microbiol Rep. 2013 Apr;5(2):291-300. doi: 10.1111/1758-2229.12017. Epub 2012 Dec 6.

PMID:
23584971
28.

In vivo gene expression of Pseudomonas putida KT2440 in the rhizosphere of different plants.

Fernández M, Conde S, Duque E, Ramos JL.

Microb Biotechnol. 2013 May;6(3):307-13. doi: 10.1111/1751-7915.12037. Epub 2013 Feb 25.

29.

Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.

Roca A, Pizarro-Tobías P, Udaondo Z, Fernández M, Matilla MA, Molina-Henares MA, Molina L, Segura A, Duque E, Ramos JL.

Environ Microbiol. 2013 Mar;15(3):780-94. doi: 10.1111/1462-2920.12037. Epub 2012 Dec 4.

PMID:
23206161
30.

Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil.

García-Salamanca A, Molina-Henares MA, van Dillewijn P, Solano J, Pizarro-Tobías P, Roca A, Duque E, Ramos JL.

Microb Biotechnol. 2013 Jan;6(1):36-44. doi: 10.1111/j.1751-7915.2012.00358.x. Epub 2012 Aug 6.

31.

Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.

Udaondo Z, Duque E, Fernández M, Molina L, de la Torre J, Bernal P, Niqui JL, Pini C, Roca A, Matilla MA, Molina-Henares MA, Silva-Jiménez H, Navarro-Avilés G, Busch A, Lacal J, Krell T, Segura A, Ramos JL.

FEBS Lett. 2012 Aug 31;586(18):2932-8. doi: 10.1016/j.febslet.2012.07.031. Epub 2012 Jul 20. Review.

32.

Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid.

Fernández M, Niqui-Arroyo JL, Conde S, Ramos JL, Duque E.

Appl Environ Microbiol. 2012 Aug;78(15):5104-10. doi: 10.1128/AEM.00619-12. Epub 2012 May 11.

33.

Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas.

Fillet S, Daniels C, Pini C, Krell T, Duque E, Bernal P, Segura A, Lu D, Zhang X, Ramos JL.

Environ Microbiol Rep. 2012 Apr;4(2):158-67. doi: 10.1111/j.1758-2229.2011.00255.x. Epub 2011 Apr 20.

PMID:
23757269
34.

Identification of reciprocal adhesion genes in pathogenic and non-pathogenic Pseudomonas.

Duque E, de la Torre J, Bernal P, Molina-Henares MA, Alaminos M, Espinosa-Urgel M, Roca A, Fernández M, de Bentzmann S, Ramos JL.

Environ Microbiol. 2013 Jan;15(1):36-48. doi: 10.1111/j.1462-2920.2012.02732.x. Epub 2012 Mar 28.

PMID:
22458445
35.

Responses of Pseudomonas putida to toxic aromatic carbon sources.

Krell T, Lacal J, Guazzaroni ME, Busch A, Silva-Jiménez H, Fillet S, Reyes-Darías JA, Muñoz-Martínez F, Rico-Jiménez M, García-Fontana C, Duque E, Segura A, Ramos JL.

J Biotechnol. 2012 Jul 31;160(1-2):25-32. doi: 10.1016/j.jbiotec.2012.01.026. Epub 2012 Feb 1.

PMID:
22321573
36.

Mapping of alpha-neo-endorphin- and neurokinin B-immunoreactivity in the human brainstem.

Duque E, Mangas A, Salinas P, Díaz-Cabiale Z, Narváez JA, Coveñas R.

Brain Struct Funct. 2013 Jan;218(1):131-49. doi: 10.1007/s00429-012-0388-3. Epub 2012 Feb 9.

PMID:
22318412
37.

Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.

Fernández M, Conde S, de la Torre J, Molina-Santiago C, Ramos JL, Duque E.

Antimicrob Agents Chemother. 2012 Feb;56(2):1001-9. doi: 10.1128/AAC.05398-11. Epub 2011 Dec 5.

38.

Laboratory research aimed at closing the gaps in microbial bioremediation.

Ramos JL, Marqués S, van Dillewijn P, Espinosa-Urgel M, Segura A, Duque E, Krell T, Ramos-González MI, Bursakov S, Roca A, Solano J, Fernádez M, Niqui JL, Pizarro-Tobias P, Wittich RM.

Trends Biotechnol. 2011 Dec;29(12):641-7. doi: 10.1016/j.tibtech.2011.06.007. Epub 2011 Jul 18. Review.

PMID:
21763021
39.

Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas.

Lacal J, Muñoz-Martínez F, Reyes-Darías JA, Duque E, Matilla M, Segura A, Calvo JJ, Jímenez-Sánchez C, Krell T, Ramos JL.

Environ Microbiol. 2011 Jul;13(7):1733-44. doi: 10.1111/j.1462-2920.2011.02493.x. Epub 2011 May 23.

PMID:
21605304
40.

The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment.

Molina L, Duque E, Gómez MJ, Krell T, Lacal J, García-Puente A, García V, Matilla MA, Ramos JL, Segura A.

Environ Microbiol. 2011 Aug;13(8):2315-27. doi: 10.1111/j.1462-2920.2011.02492.x. Epub 2011 May 23.

PMID:
21605303
41.

Characterization of the RND family of multidrug efflux pumps: in silico to in vivo confirmation of four functionally distinct subgroups.

Godoy P, Molina-Henares AJ, de la Torre J, Duque E, Ramos JL.

Microb Biotechnol. 2010 Nov;3(6):691-700. doi: 10.1111/j.1751-7915.2010.00189.x.

42.

Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1.

Matilla MA, Pizarro-Tobias P, Roca A, Fernández M, Duque E, Molina L, Wu X, van der Lelie D, Gómez MJ, Segura A, Ramos JL.

J Bacteriol. 2011 Mar;193(5):1290. doi: 10.1128/JB.01281-10. Epub 2010 Dec 23.

43.

Reduction of the complication rate in Liechtenstein hernia repair.

Just E, Botet X, Martínez S, Escolà D, Moreno I, Duque E.

Int J Surg. 2010;8(6):462-5. doi: 10.1016/j.ijsu.2010.06.006. Epub 2010 Jun 22.

44.

Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440.

Rodríguez-Herva JJ, Duque E, Molina-Henares MA, Navarro-Avilés G, Van Dillewijn P, De La Torre J, Molina-Henares AJ, La Campa AS, Ran FA, Segura A, Shingler V, Ramos JL.

Environ Microbiol Rep. 2010 Jun;2(3):373-80. doi: 10.1111/j.1758-2229.2009.00084.x. Epub 2009 Oct 7.

PMID:
23766109
45.

Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: differential chemotactic response towards receptor ligands.

Lacal J, Alfonso C, Liu X, Parales RE, Morel B, Conejero-Lara F, Rivas G, Duque E, Ramos JL, Krell T.

J Biol Chem. 2010 Jul 23;285(30):23126-36. doi: 10.1074/jbc.M110.110403. Epub 2010 May 24.

46.

Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library.

Molina-Henares MA, de la Torre J, García-Salamanca A, Molina-Henares AJ, Herrera MC, Ramos JL, Duque E.

Environ Microbiol. 2010 Jun;12(6):1468-85. doi: 10.1111/j.1462-2920.2010.02166.x. Epub 2010 Feb 11.

PMID:
20158506
47.

Global regulation of food supply by Pseudomonas putida DOT-T1E.

Daniels C, Godoy P, Duque E, Molina-Henares MA, de la Torre J, Del Arco JM, Herrera C, Segura A, Guazzaroni ME, Ferrer M, Ramos JL.

J Bacteriol. 2010 Apr;192(8):2169-81. doi: 10.1128/JB.01129-09. Epub 2010 Feb 5.

48.

Identification and characterization of the PhhR regulon in Pseudomonas putida.

Herrera MC, Duque E, Rodríguez-Herva JJ, Fernández-Escamilla AM, Ramos JL.

Environ Microbiol. 2010 Jun;12(6):1427-38. doi: 10.1111/j.1462-2920.2009.02124.x. Epub 2009 Dec 27.

PMID:
20050871
49.

A general profile for the MerR family of transcriptional regulators constructed using the semi-automated Provalidator tool.

Molina-Henares AJ, Godoy P, Duque E, Ramos JL.

Environ Microbiol Rep. 2009 Dec;1(6):518-23. doi: 10.1111/j.1758-2229.2009.00067.x. Epub 2009 Aug 19.

PMID:
23765930
50.

Exploiting environmental niches and the potential of environmental microbes.

Ramos JL, Duque E, Daniels C, Molina L, Segura A.

Environ Microbiol Rep. 2009 Oct;1(5):275-8. doi: 10.1111/j.1758-2229.2009.00072.x. Epub 2009 Sep 1. No abstract available.

PMID:
23765879

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