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Items: 1 to 50 of 193

1.

Computationally efficient joint species distribution modeling of big spatial data.

Tikhonov G, Duan L, Abrego N, Newell G, White M, Dunson D, Ovaskainen O.

Ecology. 2019 Nov 14:e02929. doi: 10.1002/ecy.2929. [Epub ahead of print]

PMID:
31725922
2.

The whole-genome landscape of Burkitt lymphoma subtypes.

Panea RI, Love CL, Shingleton JR, Reddy A, Bailey JA, Moormann AM, Otieno JA, Ong'echa JM, Oduor CI, Schroeder KMS, Masalu N, Chao NJ, Agajanian M, Major MB, Fedoriw Y, Richards KL, Rymkiewicz G, Miles RR, Alobeid B, Bhagat G, Flowers CR, Ondrejka SL, Hsi ED, Choi WWL, Au-Yeung RKH, Hartmann W, Lenz G, Meyerson H, Lin YY, Zhuang Y, Luftig MA, Waldrop A, Dave T, Thakkar D, Sahay H, Li G, Palus BC, Seshadri V, Kim SY, Gascoyne RD, Levy S, Mukhopadyay M, Dunson DB, Dave SS.

Blood. 2019 Nov 7;134(19):1598-1607. doi: 10.1182/blood.2019001880.

PMID:
31558468
3.

Tensor network factorizations: Relationships between brain structural connectomes and traits.

Zhang Z, Allen GI, Zhu H, Dunson D.

Neuroimage. 2019 Aug 15;197:330-343. doi: 10.1016/j.neuroimage.2019.04.027. Epub 2019 Apr 25.

4.

Bayesian Multi-Plate High-Throughput Screening of Compounds.

Shterev ID, Dunson DB, Chan C, Sempowski GD.

Sci Rep. 2018 Jun 22;8(1):9551. doi: 10.1038/s41598-018-27531-w.

5.

Convex mixture regression for quantitative risk assessment.

Canale A, Durante D, Dunson DB.

Biometrics. 2018 Dec;74(4):1331-1340. doi: 10.1111/biom.12917. Epub 2018 Jun 12.

6.

Theoretical limits of microclustering for record linkage.

Johndrow JE, Lum K, Dunson DB.

Biometrika. 2018 Jun;105(2):431-446. doi: 10.1093/biomet/asy003. Epub 2018 Mar 19.

7.

Active learning of cortical connectivity from two-photon imaging data.

Bertrán MA, Martínez NL, Wang Y, Dunson D, Sapiro G, Ringach D.

PLoS One. 2018 May 2;13(5):e0196527. doi: 10.1371/journal.pone.0196527. eCollection 2018.

8.

Extrema-weighted feature extraction for functional data.

van den Boom W, Mao C, Schroeder RA, Dunson DB.

Bioinformatics. 2018 Jul 15;34(14):2457-2464. doi: 10.1093/bioinformatics/bty120.

PMID:
29506206
9.

Effect of A1C and Glucose on Postoperative Mortality in Noncardiac and Cardiac Surgeries.

van den Boom W, Schroeder RA, Manning MW, Setji TL, Fiestan GO, Dunson DB.

Diabetes Care. 2018 Apr;41(4):782-788. doi: 10.2337/dc17-2232. Epub 2018 Feb 13.

PMID:
29440113
10.

Expandable factor analysis.

Srivastava S, Engelhardt BE, Dunson DB.

Biometrika. 2017 Sep;104(3):649-663. doi: 10.1093/biomet/asx030. Epub 2017 Jun 16.

11.

Bayesian Local Extremum Splines.

Wheeler MW, Dunson DB, Herring AH.

Biometrika. 2017 Dec;104(4):939-952.

12.

Mapping population-based structural connectomes.

Zhang Z, Descoteaux M, Zhang J, Girard G, Chamberland M, Dunson D, Srivastava A, Zhu H.

Neuroimage. 2018 May 15;172:130-145. doi: 10.1016/j.neuroimage.2017.12.064. Epub 2018 Feb 3.

13.

TENSOR DECOMPOSITIONS AND SPARSE LOG-LINEAR MODELS.

Johndrow JE, Bhattacharya A, Dunson DB.

Ann Stat. 2017;45(1):1-38. doi: 10.1214/15-AOS1414. Epub 2017 Feb 21.

14.

Extrinsic local regression on manifold-valued data.

Lin L, St Thomas B, Zhu H, Dunson DB.

J Am Stat Assoc. 2017;112(519):1261-1273. doi: 10.1080/01621459.2016.1208615. Epub 2016 Jul 20.

15.

Genetic and Functional Drivers of Diffuse Large B Cell Lymphoma.

Reddy A, Zhang J, Davis NS, Moffitt AB, Love CL, Waldrop A, Leppa S, Pasanen A, Meriranta L, Karjalainen-Lindsberg ML, Nørgaard P, Pedersen M, Gang AO, Høgdall E, Heavican TB, Lone W, Iqbal J, Qin Q, Li G, Kim SY, Healy J, Richards KL, Fedoriw Y, Bernal-Mizrachi L, Koff JL, Staton AD, Flowers CR, Paltiel O, Goldschmidt N, Calaminici M, Clear A, Gribben J, Nguyen E, Czader MB, Ondrejka SL, Collie A, Hsi ED, Tse E, Au-Yeung RKH, Kwong YL, Srivastava G, Choi WWL, Evens AM, Pilichowska M, Sengar M, Reddy N, Li S, Chadburn A, Gordon LI, Jaffe ES, Levy S, Rempel R, Tzeng T, Happ LE, Dave T, Rajagopalan D, Datta J, Dunson DB, Dave SS.

Cell. 2017 Oct 5;171(2):481-494.e15. doi: 10.1016/j.cell.2017.09.027.

16.

Rat intersubjective decisions are encoded by frequency-specific oscillatory contexts.

Schaich Borg J, Srivastava S, Lin L, Heffner J, Dunson D, Dzirasa K, de Lecea L.

Brain Behav. 2017 May 5;7(6):e00710. doi: 10.1002/brb3.710. eCollection 2017 Jun.

17.

How are species interactions structured in species-rich communities? A new method for analysing time-series data.

Ovaskainen O, Tikhonov G, Dunson D, Grøtan V, Engen S, Sæther BE, Abrego N.

Proc Biol Sci. 2017 May 31;284(1855). pii: 20170768. doi: 10.1098/rspb.2017.0768.

18.

Enteropathy-associated T cell lymphoma subtypes are characterized by loss of function of SETD2.

Moffitt AB, Ondrejka SL, McKinney M, Rempel RE, Goodlad JR, Teh CH, Leppa S, Mannisto S, Kovanen PE, Tse E, Au-Yeung RKH, Kwong YL, Srivastava G, Iqbal J, Yu J, Naresh K, Villa D, Gascoyne RD, Said J, Czader MB, Chadburn A, Richards KL, Rajagopalan D, Davis NS, Smith EC, Palus BC, Tzeng TJ, Healy JA, Lugar PL, Datta J, Love C, Levy S, Dunson DB, Zhuang Y, Hsi ED, Dave SS.

J Exp Med. 2017 May 1;214(5):1371-1386. doi: 10.1084/jem.20160894. Epub 2017 Apr 19.

19.

How to make more out of community data? A conceptual framework and its implementation as models and software.

Ovaskainen O, Tikhonov G, Norberg A, Guillaume Blanchet F, Duan L, Dunson D, Roslin T, Abrego N.

Ecol Lett. 2017 May;20(5):561-576. doi: 10.1111/ele.12757. Epub 2017 Mar 20.

PMID:
28317296
20.

Bayesian network-response regression.

Wang L, Durante D, Jung RE, Dunson DB.

Bioinformatics. 2017 Jun 15;33(12):1859-1866. doi: 10.1093/bioinformatics/btx050.

PMID:
28165112
21.

The Genetic Basis of Hepatosplenic T-cell Lymphoma.

McKinney M, Moffitt AB, Gaulard P, Travert M, De Leval L, Nicolae A, Raffeld M, Jaffe ES, Pittaluga S, Xi L, Heavican T, Iqbal J, Belhadj K, Delfau-Larue MH, Fataccioli V, Czader MB, Lossos IS, Chapman-Fredricks JR, Richards KL, Fedoriw Y, Ondrejka SL, Hsi ED, Low L, Weisenburger D, Chan WC, Mehta-Shah N, Horwitz S, Bernal-Mizrachi L, Flowers CR, Beaven AW, Parihar M, Baseggio L, Parrens M, Moreau A, Sujobert P, Pilichowska M, Evens AM, Chadburn A, Au-Yeung RK, Srivastava G, Choi WW, Goodlad JR, Aurer I, Basic-Kinda S, Gascoyne RD, Davis NS, Li G, Zhang J, Rajagopalan D, Reddy A, Love C, Levy S, Zhuang Y, Datta J, Dunson DB, Davé SS.

Cancer Discov. 2017 Apr;7(4):369-379. doi: 10.1158/2159-8290.CD-16-0330. Epub 2017 Jan 25.

22.

Bayesian genome- and epigenome-wide association studies with gene level dependence.

Lock EF, Dunson DB.

Biometrics. 2017 Sep;73(3):1018-1028. doi: 10.1111/biom.12649. Epub 2017 Jan 12.

23.

Bayesian inference on quasi-sparse count data.

Datta J, Dunson DB.

Biometrika. 2016 Dec;103(4):971-983. doi: 10.1093/biomet/asw053. Epub 2016 Dec 8.

24.

A Foxp2 Mutation Implicated in Human Speech Deficits Alters Sequencing of Ultrasonic Vocalizations in Adult Male Mice.

Chabout J, Sarkar A, Patel SR, Radden T, Dunson DB, Fisher SE, Jarvis ED.

Front Behav Neurosci. 2016 Oct 20;10:197. eCollection 2016.

25.

Dysregulation of Prefrontal Cortex-Mediated Slow-Evolving Limbic Dynamics Drives Stress-Induced Emotional Pathology.

Hultman R, Mague SD, Li Q, Katz BM, Michel N, Lin L, Wang J, David LK, Blount C, Chandy R, Carlson D, Ulrich K, Carin L, Dunson D, Kumar S, Deisseroth K, Moore SD, Dzirasa K.

Neuron. 2016 Jul 20;91(2):439-52. doi: 10.1016/j.neuron.2016.05.038. Epub 2016 Jun 23.

26.

Personalised estimation of a woman's most fertile days.

Li D, Heyer L, Jennings VH, Smith CA, Dunson DB.

Eur J Contracept Reprod Health Care. 2016 Aug;21(4):323-8. doi: 10.1080/13625187.2016.1196485. Epub 2016 Jun 14. Erratum in: Eur J Contracept Reprod Health Care. 2017 Oct;22(5):400.

PMID:
27297611
27.

Data augmentation for models based on rejection sampling.

Rao V, Lin L, Dunson DB.

Biometrika. 2016 Jun;103(2):319-335. Epub 2016 May 6.

28.

Nonparametric Bayes modeling with sample survey weights.

Kunihama T, Herring AH, Halpern CT, Dunson DB.

Stat Probab Lett. 2016 Jun;113:41-48. doi: 10.1016/j.spl.2016.02.009. Epub 2016 Mar 4.

29.

Shared kernel Bayesian screening.

Lock EF, Dunson DB.

Biometrika. 2015 Dec;102(4):829-842. Epub 2015 Jul 28.

30.

Dirichlet-Laplace priors for optimal shrinkage.

Bhattacharya A, Pati D, Pillai NS, Dunson DB.

J Am Stat Assoc. 2015 Dec 1;110(512):1479-1490. Epub 2014 Sep 25.

31.

Subspace segmentation by dense block and sparse representation.

Tang K, Dunson DB, Su Z, Liu R, Zhang J, Dong J.

Neural Netw. 2016 Mar;75:66-76. doi: 10.1016/j.neunet.2015.11.011. Epub 2015 Dec 7.

PMID:
26720247
32.

Nonparametric Bayes modeling for case control studies with many predictors.

Zhou J, Herring AH, Bhattacharya A, Olshan AF, Dunson DB; National Birth Defects Prevention Study.

Biometrics. 2016 Mar;72(1):184-92. doi: 10.1111/biom.12411. Epub 2015 Sep 22.

33.

A hybrid bayesian approach for genome-wide association studies on related individuals.

Yazdani A, Dunson DB.

Bioinformatics. 2015 Dec 15;31(24):3890-6. doi: 10.1093/bioinformatics/btv496. Epub 2015 Aug 30.

PMID:
26323717
34.

Semiparametric Bayes local additive models for longitudinal data.

Hua Z, Zhu H, Dunson DB.

Stat Biosci. 2015 May 1;7(1):90-107.

35.

Male mice song syntax depends on social contexts and influences female preferences.

Chabout J, Sarkar A, Dunson DB, Jarvis ED.

Front Behav Neurosci. 2015 Apr 1;9:76. doi: 10.3389/fnbeh.2015.00076. eCollection 2015.

36.

Marginally specified priors for non-parametric Bayesian estimation.

Kessler DC, Hoff PD, Dunson DB.

J R Stat Soc Series B Stat Methodol. 2015 Jan 1;77(1):35-58.

37.

Joint eQTL assessment of whole blood and dura mater tissue from individuals with Chiari type I malformation.

Lock EF, Soldano KL, Garrett ME, Cope H, Markunas CA, Fuchs H, Grant G, Dunson DB, Gregory SG, Ashley-Koch AE.

BMC Genomics. 2015 Jan 22;16:11. doi: 10.1186/s12864-014-1211-8.

38.

Benchmark pregnancy rates and the assessment of post-coital contraceptives: an update.

Li D, Wilcox AJ, Dunson DB.

Contraception. 2015 Apr;91(4):344-9. doi: 10.1016/j.contraception.2015.01.002. Epub 2015 Jan 12.

39.

Bayesian factorizations of big sparse tensors.

Zhou J, Bhattacharya A, Herring A, Dunson D.

J Am Stat Assoc. 2015;110(512):1562-1576. doi: 10.1080/01621459.2014.983233. Epub 2016 Jan 15.

40.

Bayesian Multiscale Modeling of Closed Curves in Point Clouds.

Gu K, Pati D, Dunson DB.

J Am Stat Assoc. 2014 Oct;109(508):1481-1494.

41.

Mechanistic Hierarchical Gaussian Processes.

Wheeler MW, Dunson DB, Pandalai SP, Baker BA, Herring AH.

J Am Stat Assoc. 2014 Jul;109(507):894-904.

42.

ANISOTROPIC FUNCTION ESTIMATION USING MULTI-BANDWIDTH GAUSSIAN PROCESSES.

Bhattacharya A, Pati D, Dunson D.

Ann Stat. 2014 Feb 1;42(1):352-381.

43.

Bayes variable selection in semiparametric linear models.

Kundu S, Dunson DB.

J Am Stat Assoc. 2014 Mar 1;109(505):437-447.

44.

Enriched Stick Breaking Processes for Functional Data.

Scarpa B, Dunson DB.

J Am Stat Assoc. 2014;109(506):647-660.

45.

Generalized Dynamic Factor Models for Mixed-Measurement Time Series.

Cui K, Dunson DB.

J Comput Graph Stat. 2014 Feb 12;23(1):169-191.

46.

The genomic landscape of mantle cell lymphoma is related to the epigenetically determined chromatin state of normal B cells.

Zhang J, Jima D, Moffitt AB, Liu Q, Czader M, Hsi ED, Fedoriw Y, Dunphy CH, Richards KL, Gill JI, Sun Z, Love C, Scotland P, Lock E, Levy S, Hsu DS, Dunson D, Dave SS.

Blood. 2014 May 8;123(19):2988-96. doi: 10.1182/blood-2013-07-517177. Epub 2014 Mar 28.

47.

Learning phenotype densities conditional on many interacting predictors.

Kessler DC, Taylor JA, Dunson DB.

Bioinformatics. 2014 Jun 1;30(11):1562-8. doi: 10.1093/bioinformatics/btu040. Epub 2014 Feb 5.

48.

Bayesian modeling of temporal dependence in large sparse contingency tables.

Kunihama T, Dunson DB.

J Am Stat Assoc. 2013 Jan 1;108(504):1324-1338.

49.

GENERALIZED DOUBLE PARETO SHRINKAGE.

Armagan A, Dunson DB, Lee J.

Stat Sin. 2013 Jan 1;23(1):119-143.

50.

Bayesian nonparametric regression with varying residual density.

Pati D, Dunson DB.

Ann Inst Stat Math. 2014 Feb;66(1):1-31.

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