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Items: 1 to 50 of 82

1.

Characterizing grapevine 3D inflorescence architecture using X-ray imaging and advanced morphometrics: implications for understanding cluster density.

Li M, Klein LL, Duncan KE, Jiang N, Chitwood DH, Londo J, Miller AJ, Topp CN.

J Exp Bot. 2019 Aug 31. pii: erz394. doi: 10.1093/jxb/erz394. [Epub ahead of print]

PMID:
31504758
2.

Community succession in an anaerobic long-chain paraffin-degrading consortium and impact on chemical and electrical microbially influenced iron corrosion.

Liang R, Davidova I, Hirano SI, Duncan KE, Suflita JM.

FEMS Microbiol Ecol. 2019 Aug 1;95(8). pii: fiz111. doi: 10.1093/femsec/fiz111.

PMID:
31281924
3.

Three-Dimensional Time-Lapse Analysis Reveals Multiscale Relationships in Maize Root Systems with Contrasting Architectures.

Jiang N, Floro E, Bray AL, Laws B, Duncan KE, Topp CN.

Plant Cell. 2019 Aug;31(8):1708-1722. doi: 10.1105/tpc.19.00015. Epub 2019 May 23.

4.

Emerging Evidence of Translational Control by AU-Rich Element-Binding Proteins.

Otsuka H, Fukao A, Funakami Y, Duncan KE, Fujiwara T.

Front Genet. 2019 May 2;10:332. doi: 10.3389/fgene.2019.00332. eCollection 2019. Review.

5.

Intrinsic Resistance to MEK Inhibition through BET Protein-Mediated Kinome Reprogramming in NF1-Deficient Ovarian Cancer.

Kurimchak AM, Shelton C, Herrera-Montávez C, Duncan KE, Chernoff J, Duncan JS.

Mol Cancer Res. 2019 Aug;17(8):1721-1734. doi: 10.1158/1541-7786.MCR-18-1332. Epub 2019 May 1.

PMID:
31043489
6.

Bassoon proteinopathy drives neurodegeneration in multiple sclerosis.

Schattling B, Engler JB, Volkmann C, Rothammer N, Woo MS, Petersen M, Winkler I, Kaufmann M, Rosenkranz SC, Fejtova A, Thomas U, Bose A, Bauer S, Träger S, Miller KK, Brück W, Duncan KE, Salinas G, Soba P, Gundelfinger ED, Merkler D, Friese MA.

Nat Neurosci. 2019 Jun;22(6):887-896. doi: 10.1038/s41593-019-0385-4. Epub 2019 Apr 22.

PMID:
31011226
7.

Ubiquitin C-terminal hydrolase L1 (UCH-L1) loss causes neurodegeneration by altering protein turnover in the first postnatal weeks.

Reinicke AT, Laban K, Sachs M, Kraus V, Walden M, Damme M, Sachs W, Reichelt J, Schweizer M, Janiesch PC, Duncan KE, Saftig P, Rinschen MM, Morellini F, Meyer-Schwesinger C.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7963-7972. doi: 10.1073/pnas.1812413116. Epub 2019 Mar 28.

PMID:
30923110
8.

Effects of sample preservation on marine microbial diversity analysis.

Oldham AL, Sandifer V, Duncan KE.

J Microbiol Methods. 2019 Mar;158:6-13. doi: 10.1016/j.mimet.2019.01.006. Epub 2019 Jan 21.

PMID:
30677454
9.

TDP-43 enhances translation of specific mRNAs linked to neurodegenerative disease.

Neelagandan N, Gonnella G, Dang S, Janiesch PC, Miller KK, Küchler K, Marques RF, Indenbirken D, Alawi M, Grundhoff A, Kurtz S, Duncan KE.

Nucleic Acids Res. 2019 Jan 10;47(1):341-361. doi: 10.1093/nar/gky972.

10.

Translation of Hepatitis A Virus IRES Is Upregulated by a Hepatic Cell-Specific Factor.

Sadahiro A, Fukao A, Kosaka M, Funakami Y, Takizawa N, Takeuchi O, Duncan KE, Fujiwara T.

Front Genet. 2018 Aug 10;9:307. doi: 10.3389/fgene.2018.00307. eCollection 2018.

11.

A semi-continuous system for monitoring microbially influenced corrosion.

Eid MM, Duncan KE, Tanner RS.

J Microbiol Methods. 2018 Jul;150:55-60. doi: 10.1016/j.mimet.2018.05.018. Epub 2018 May 24.

PMID:
29803719
12.

Changes in Metabolites Present in Lung-Lining Fluid Following Exposure of Humans to Ozone.

Cheng W, Duncan KE, Ghio AJ, Ward-Caviness C, Karoly ED, Diaz-Sanchez D, Conolly RB, Devlin RB.

Toxicol Sci. 2018 Jun 1;163(2):430-439. doi: 10.1093/toxsci/kfy043.

13.

Anaerobic biodegradation of biofuels and their impact on the corrosion of a Cu-Ni alloy in marine environments.

Liang R, Aydin E, Le Borgne S, Sunner J, Duncan KE, Suflita JM.

Chemosphere. 2018 Mar;195:427-436. doi: 10.1016/j.chemosphere.2017.12.082. Epub 2017 Dec 13.

PMID:
29274988
14.

Design features of offshore oil production platforms influence their susceptibility to biocorrosion.

Duncan KE, Davidova IA, Nunn HS, Stamps BW, Stevenson BS, Souquet PJ, Suflita JM.

Appl Microbiol Biotechnol. 2017 Aug;101(16):6517-6529. doi: 10.1007/s00253-017-8356-8. Epub 2017 Jun 8.

PMID:
28597336
15.

Classroom sound can be used to classify teaching practices in college science courses.

Owens MT, Seidel SB, Wong M, Bejines TE, Lietz S, Perez JR, Sit S, Subedar ZS, Acker GN, Akana SF, Balukjian B, Benton HP, Blair JR, Boaz SM, Boyer KE, Bram JB, Burrus LW, Byrd DT, Caporale N, Carpenter EJ, Chan YM, Chen L, Chovnick A, Chu DS, Clarkson BK, Cooper SE, Creech C, Crow KD, de la Torre JR, Denetclaw WF, Duncan KE, Edwards AS, Erickson KL, Fuse M, Gorga JJ, Govindan B, Green LJ, Hankamp PZ, Harris HE, He ZH, Ingalls S, Ingmire PD, Jacobs JR, Kamakea M, Kimpo RR, Knight JD, Krause SK, Krueger LE, Light TL, Lund L, Márquez-Magaña LM, McCarthy BK, McPheron LJ, Miller-Sims VC, Moffatt CA, Muick PC, Nagami PH, Nusse GL, Okimura KM, Pasion SG, Patterson R, Pennings PS, Riggs B, Romeo J, Roy SW, Russo-Tait T, Schultheis LM, Sengupta L, Small R, Spicer GS, Stillman JH, Swei A, Wade JM, Waters SB, Weinstein SL, Willsie JK, Wright DW, Harrison CD, Kelley LA, Trujillo G, Domingo CR, Schinske JN, Tanner KD.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3085-3090. doi: 10.1073/pnas.1618693114. Epub 2017 Mar 6.

16.

Microbial activities in hydrocarbon-laden wastewaters: Impact on diesel fuel stability and the biocorrosion of carbon steel.

Liang R, Duncan KE, Le Borgne S, Davidova I, Yakimov MM, Suflita JM.

J Biotechnol. 2017 Aug 20;256:68-75. doi: 10.1016/j.jbiotec.2017.02.021. Epub 2017 Feb 21.

PMID:
28235610
17.

Metabolomic and Metagenomic Analysis of Two Crude Oil Production Pipelines Experiencing Differential Rates of Corrosion.

Bonifay V, Wawrik B, Sunner J, Snodgrass EC, Aydin E, Duncan KE, Callaghan AV, Oldham A, Liengen T, Beech I.

Front Microbiol. 2017 Jan 31;8:99. doi: 10.3389/fmicb.2017.00099. eCollection 2017.

18.

Molecular methods resolve the bacterial composition of natural marine biofilms on galvanically coupled stainless steel cathodes.

Oldham AL, Steinberg MK, Duncan KE, Makama Z, Beech I.

J Ind Microbiol Biotechnol. 2017 Feb;44(2):167-180. doi: 10.1007/s10295-016-1887-7. Epub 2016 Dec 24.

PMID:
28013395
19.

Impaired Amino Acid Transport at the Blood Brain Barrier Is a Cause of Autism Spectrum Disorder.

Tărlungeanu DC, Deliu E, Dotter CP, Kara M, Janiesch PC, Scalise M, Galluccio M, Tesulov M, Morelli E, Sonmez FM, Bilguvar K, Ohgaki R, Kanai Y, Johansen A, Esharif S, Ben-Omran T, Topcu M, Schlessinger A, Indiveri C, Duncan KE, Caglayan AO, Gunel M, Gleeson JG, Novarino G.

Cell. 2016 Dec 1;167(6):1481-1494.e18. doi: 10.1016/j.cell.2016.11.013.

20.

Ozone-derived Oxysterols Affect Liver X Receptor (LXR) Signaling: A POTENTIAL ROLE FOR LIPID-PROTEIN ADDUCTS.

Speen AM, Kim HH, Bauer RN, Meyer M, Gowdy KM, Fessler MB, Duncan KE, Liu W, Porter NA, Jaspers I.

J Biol Chem. 2016 Nov 25;291(48):25192-25206. Epub 2016 Oct 4.

21.

Ophthalmic presentation of giant cell arteritis in African-Americans.

Garrity ST, Pistilli M, Vaphiades MS, Richards NQ, Subramanian PS, Rosa PR, Lam BL, Osborne BJ, Liu GT, Duncan KE, Shin RK, Volpe NJ, Shindler KS, Lee MS, Moster ML, Tracey EH, Cuprill-Nilson SE, Tamhankar MA.

Eye (Lond). 2017 Jan;31(1):113-118. doi: 10.1038/eye.2016.199. Epub 2016 Sep 16.

22.

Discovery of midgut genes for the RNA interference control of corn rootworm.

Hu X, Richtman NM, Zhao JZ, Duncan KE, Niu X, Procyk LA, Oneal MA, Kernodle BM, Steimel JP, Crane VC, Sandahl G, Ritland JL, Howard RJ, Presnail JK, Lu AL, Wu G.

Sci Rep. 2016 Jul 28;6:30542. doi: 10.1038/srep30542.

23.

Resistance to BET Bromodomain Inhibitors Is Mediated by Kinome Reprogramming in Ovarian Cancer.

Kurimchak AM, Shelton C, Duncan KE, Johnson KJ, Brown J, O'Brien S, Gabbasov R, Fink LS, Li Y, Lounsbury N, Abou-Gharbia M, Childers WE, Connolly DC, Chernoff J, Peterson JR, Duncan JS.

Cell Rep. 2016 Aug 2;16(5):1273-1286. doi: 10.1016/j.celrep.2016.06.091. Epub 2016 Jul 21.

24.

Metabolic Capability of a Predominant Halanaerobium sp. in Hydraulically Fractured Gas Wells and Its Implication in Pipeline Corrosion.

Liang R, Davidova IA, Marks CR, Stamps BW, Harriman BH, Stevenson BS, Duncan KE, Suflita JM.

Front Microbiol. 2016 Jun 22;7:988. doi: 10.3389/fmicb.2016.00988. eCollection 2016.

25.

A Novel HSP90 Inhibitor-Drug Conjugate to SN38 Is Highly Effective in Small Cell Lung Cancer.

Gaponova AV, Nikonova AS, Deneka A, Kopp MC, Kudinov AE, Skobeleva N, Khazak V, Ogawa LS, Cai KQ, Duncan KE, Duncan JS, Egleston BL, Proia DA, Boumber Y, Golemis EA.

Clin Cancer Res. 2016 Oct 15;22(20):5120-5129. doi: 10.1158/1078-0432.CCR-15-3068. Epub 2016 Jun 7.

26.

De Novo Mutations in DENR Disrupt Neuronal Development and Link Congenital Neurological Disorders to Faulty mRNA Translation Re-initiation.

Haas MA, Ngo L, Li SS, Schleich S, Qu Z, Vanyai HK, Cullen HD, Cardona-Alberich A, Gladwyn-Ng IE, Pagnamenta AT, Taylor JC, Stewart H, Kini U, Duncan KE, Teleman AA, Keays DA, Heng JI.

Cell Rep. 2016 Jun 7;15(10):2251-2265. doi: 10.1016/j.celrep.2016.04.090. Epub 2016 May 26.

27.

Methanogenic paraffin degradation proceeds via alkane addition to fumarate by 'Smithella' spp. mediated by a syntrophic coupling with hydrogenotrophic methanogens.

Wawrik B, Marks CR, Davidova IA, McInerney MJ, Pruitt S, Duncan KE, Suflita JM, Callaghan AV.

Environ Microbiol. 2016 Sep;18(8):2604-19. doi: 10.1111/1462-2920.13374. Epub 2016 Jun 27.

PMID:
27198766
28.

Backscattered electron SEM imaging of resin sections from plant specimens: observation of histological to subcellular structure and CLEM.

Rizzo NW, Duncan KE, Bourett TM, Howard RJ.

J Microsc. 2016 Aug;263(2):142-7. doi: 10.1111/jmi.12373. Epub 2015 Dec 28.

29.

Metabolomic and high-throughput sequencing analysis-modern approach for the assessment of biodeterioration of materials from historic buildings.

Gutarowska B, Celikkol-Aydin S, Bonifay V, Otlewska A, Aydin E, Oldham AL, Brauer JI, Duncan KE, Adamiak J, Sunner JA, Beech IB.

Front Microbiol. 2015 Sep 29;6:979. doi: 10.3389/fmicb.2015.00979. eCollection 2015.

30.

The SLC36 transporter Pathetic is required for extreme dendrite growth in Drosophila sensory neurons.

Lin WY, Williams C, Yan C, Koledachkina T, Luedke K, Dalton J, Bloomsburg S, Morrison N, Duncan KE, Kim CC, Parrish JZ.

Genes Dev. 2015 Jun 1;29(11):1120-35. doi: 10.1101/gad.259119.115.

31.

MEK inhibitors: a new class of chemotherapeutic agents with ocular toxicity.

Duncan KE, Chang LY, Patronas M.

Eye (Lond). 2015 Aug;29(8):1003-12. doi: 10.1038/eye.2015.82. Epub 2015 Jun 5. Review.

32.

Metalation kinetics of the human α-metallothionein 1a fragment is dependent on the fluxional structure of the apo-protein.

Irvine GW, Duncan KE, Gullons M, Stillman MJ.

Chemistry. 2015 Jan 12;21(3):1269-79. doi: 10.1002/chem.201404283. Epub 2014 Nov 17.

PMID:
25403957
33.

Identification and characterization of microbial biofilm communities associated with corroded oil pipeline surfaces.

Lenhart TR, Duncan KE, Beech IB, Sunner JA, Smith W, Bonifay V, Biri B, Suflita JM.

Biofouling. 2014;30(7):823-35. doi: 10.1080/08927014.2014.931379.

PMID:
25115517
34.

Interaction with epithelial cells modifies airway macrophage response to ozone.

Bauer RN, Müller L, Brighton LE, Duncan KE, Jaspers I.

Am J Respir Cell Mol Biol. 2015 Mar;52(3):285-94. doi: 10.1165/rcmb.2014-0035OC.

35.

DENR-MCT-1 promotes translation re-initiation downstream of uORFs to control tissue growth.

Schleich S, Strassburger K, Janiesch PC, Koledachkina T, Miller KK, Haneke K, Cheng YS, Kuechler K, Stoecklin G, Duncan KE, Teleman AA.

Nature. 2014 Aug 14;512(7513):208-212. doi: 10.1038/nature13401. Epub 2014 Jul 6.

36.

Progress in assessing air pollutant risks from in vitro exposures: matching ozone dose and effect in human airway cells.

Hatch GE, Duncan KE, Diaz-Sanchez D, Schmitt MT, Ghio AJ, Carraway MS, McKee J, Dailey LA, Berntsen J, Devlin RB.

Toxicol Sci. 2014 Sep;141(1):198-205. doi: 10.1093/toxsci/kfu115. Epub 2014 Jun 13.

37.

Iron decreases biological effects of ozone exposure.

Ghio AJ, Soukup JM, Dailey LA, Richards JH, Duncan KE, Lehmann J.

Inhal Toxicol. 2014 Jun;26(7):391-9. doi: 10.3109/08958378.2014.908330.

PMID:
24862973
38.

A novel mouse model for inhibition of DOHH-mediated hypusine modification reveals a crucial function in embryonic development, proliferation and oncogenic transformation.

Sievert H, Pällmann N, Miller KK, Hermans-Borgmeyer I, Venz S, Sendoel A, Preukschas M, Schweizer M, Boettcher S, Janiesch PC, Streichert T, Walther R, Hengartner MO, Manz MG, Brümmendorf TH, Bokemeyer C, Braig M, Hauber J, Duncan KE, Balabanov S.

Dis Model Mech. 2014 Aug;7(8):963-76. doi: 10.1242/dmm.014449. Epub 2014 May 15.

39.

Ozone induces a proinflammatory response in primary human bronchial epithelial cells through mitogen-activated protein kinase activation without nuclear factor-κB activation.

McCullough SD, Duncan KE, Swanton SM, Dailey LA, Diaz-Sanchez D, Devlin RB.

Am J Respir Cell Mol Biol. 2014 Sep;51(3):426-35. doi: 10.1165/rcmb.2013-0515OC.

PMID:
24693990
40.

Roles of thermophilic thiosulfate-reducing bacteria and methanogenic archaea in the biocorrosion of oil pipelines.

Liang R, Grizzle RS, Duncan KE, McInerney MJ, Suflita JM.

Front Microbiol. 2014 Mar 6;5:89. doi: 10.3389/fmicb.2014.00089. eCollection 2014.

41.

Issues for storing plant-based alternative fuels in marine environments.

Lee JS, Ray RI, Little BJ, Duncan KE, Aktas DF, Oldham AL, Davidova IA, Suflita JM.

Bioelectrochemistry. 2014 Jun;97:145-53. doi: 10.1016/j.bioelechem.2013.12.003. Epub 2013 Dec 24.

PMID:
24411308
42.

In vitro determinants of asbestos fiber toxicity: effect on the relative toxicity of Libby amphibole in primary human airway epithelial cells.

Duncan KE, Cook PM, Gavett SH, Dailey LA, Mahoney RK, Ghio AJ, Roggli VL, Devlin RB.

Part Fibre Toxicol. 2014 Jan 8;11:2. doi: 10.1186/1743-8977-11-2.

43.

Maize ARGOS1 (ZAR1) transgenic alleles increase hybrid maize yield.

Guo M, Rupe MA, Wei J, Winkler C, Goncalves-Butruille M, Weers BP, Cerwick SF, Dieter JA, Duncan KE, Howard RJ, Hou Z, Löffler CM, Cooper M, Simmons CR.

J Exp Bot. 2014 Jan;65(1):249-60. doi: 10.1093/jxb/ert370. Epub 2013 Nov 11.

44.

The effect of corrosion inhibitors on microbial communities associated with corrosion in a model flow cell system.

Duncan KE, Perez-Ibarra BM, Jenneman G, Harris JB, Webb R, Sublette K.

Appl Microbiol Biotechnol. 2014 Jan;98(2):907-18. doi: 10.1007/s00253-013-4906-x. Epub 2013 May 1.

PMID:
23636692
45.

Impact of organosulfur content on diesel fuel stability and implications for carbon steel corrosion.

Lyles CN, Aktas DF, Duncan KE, Callaghan AV, Stevenson BS, Suflita JM.

Environ Sci Technol. 2013 Jun 4;47(11):6052-62. doi: 10.1021/es4006702. Epub 2013 May 21.

PMID:
23614475
46.

Similar gene estimates from circular and linear standards in quantitative PCR analyses using the prokaryotic 16S rRNA gene as a model.

Oldham AL, Duncan KE.

PLoS One. 2012;7(12):e51931. doi: 10.1371/journal.pone.0051931. Epub 2012 Dec 19.

47.

Automated DNA extraction platforms offer solutions to challenges of assessing microbial biofouling in oil production facilities.

Oldham AL, Drilling HS, Stamps BW, Stevenson BS, Duncan KE.

AMB Express. 2012 Nov 20;2(1):60. doi: 10.1186/2191-0855-2-60.

48.

Automated high-throughput RNAi screening in human cells combined with reporter mRNA transfection to identify novel regulators of translation.

Casanova CM, Sehr P, Putzker K, Hentze MW, Neumann B, Duncan KE, Thoma C.

PLoS One. 2012;7(9):e45943. doi: 10.1371/journal.pone.0045943. Epub 2012 Sep 27.

49.

Protein-protein-interaction network organization of the hypusine modification system.

Sievert H, Venz S, Platas-Barradas O, Dhople VM, Schaletzky M, Nagel CH, Braig M, Preukschas M, Pällmann N, Bokemeyer C, Brümmendorf TH, Pörtner R, Walther R, Duncan KE, Hauber J, Balabanov S.

Mol Cell Proteomics. 2012 Nov;11(11):1289-305. doi: 10.1074/mcp.M112.019059. Epub 2012 Aug 10.

50.

Controlled exposure of healthy young volunteers to ozone causes cardiovascular effects.

Devlin RB, Duncan KE, Jardim M, Schmitt MT, Rappold AG, Diaz-Sanchez D.

Circulation. 2012 Jul 3;126(1):104-11. doi: 10.1161/CIRCULATIONAHA.112.094359. Epub 2012 Jun 25.

PMID:
22732313

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