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The Evolving Field Of Genetic Epidemiology: From Familial Aggregation To Genomic Sequencing.

Duggal P, Ladd-Acosta C, Ray D, Beaty TH.

Am J Epidemiol. 2019 Sep 11. pii: kwz193. doi: 10.1093/aje/kwz193. [Epub ahead of print]


Personal Genetic Information about HIV: Research Participants' Views of Ethical, Social, and Behavioral Implications.

Boyce A, Walker A, Duggal P, Thio CL, Geller G.

Public Health Genomics. 2019;22(1-2):36-45. doi: 10.1159/000501672. Epub 2019 Aug 28.


Heritability analysis of nontraditional glycemic biomarkers in the Atherosclerosis Risk in Communities Study.

Loomis SJ, Tin A, Coresh J, Boerwinkle E, Pankow JS, Köttgen A, Selvin E, Duggal P.

Genet Epidemiol. 2019 Oct;43(7):776-785. doi: 10.1002/gepi.22243. Epub 2019 Jun 19.


Analysis of Heritability and Genetic Architecture of Pancreatic Cancer: A PanC4 Study.

Chen F, Childs EJ, Mocci E, Bracci P, Gallinger S, Li D, Neale RE, Olson SH, Scelo G, Bamlet WR, Blackford AL, Borges M, Brennan P, Chaffee KG, Duggal P, Hassan MJ, Holly EA, Hung RJ, Goggins MG, Kurtz RC, Oberg AL, Orlow I, Yu H, Petersen GM, Risch HA, Klein AP.

Cancer Epidemiol Biomarkers Prev. 2019 Jul;28(7):1238-1245. doi: 10.1158/1055-9965.EPI-18-1235. Epub 2019 Apr 23.


Rare variants in SLC5A10 are associated with serum 1,5-anhydroglucitol (1,5-AG) in the Atherosclerosis Risk in Communities (ARIC) Study.

Loomis SJ, Köttgen A, Li M, Tin A, Coresh J, Boerwinkle E, Gibbs R, Muzny D, Pankow J, Selvin E, Duggal P.

Sci Rep. 2019 Apr 11;9(1):5941. doi: 10.1038/s41598-019-42202-0.


Association of FMO3 Variants with Blood Pressure in the Atherosclerosis Risk in Communities Study.

Bryant TS, Duggal P, Yu B, Morrison AC, Shafi T, Ehret G, Franceschini N, Boerwinkle E, Coresh J, Tin A.

Int J Hypertens. 2019 Feb 18;2019:2137629. doi: 10.1155/2019/2137629. eCollection 2019.


Multi-Ancestry Genome-Wide Association Study of Spontaneous Clearance of Hepatitis C Virus.

Vergara C, Thio CL, Johnson E, Kral AH, O'Brien TR, Goedert JJ, Mangia A, Piazzolla V, Mehta SH, Kirk GD, Kim AY, Lauer GM, Chung RT, Cox AL, Peters MG, Khakoo SI, Alric L, Cramp ME, Donfield SM, Edlin BR, Busch MP, Alexander G, Rosen HR, Murphy EL, Latanich R, Wojcik GL, Taub MA, Valencia A, Thomas DL, Duggal P.

Gastroenterology. 2019 Apr;156(5):1496-1507.e7. doi: 10.1053/j.gastro.2018.12.014. Epub 2018 Dec 26.


Epidemiology at a time for unity.

Lau B, Duggal P, Ehrhardt S.

Int J Epidemiol. 2019 Feb 1;48(1):321. doi: 10.1093/ije/dyy282. No abstract available.


Clinical Subpopulations in a Sample of North American Children Diagnosed With Acute Flaccid Myelitis, 2012-2016.

Elrick MJ, Gordon-Lipkin E, Crawford TO, Van Haren K, Messacar K, Thornton N, Dee E, Voskertchian A, Nance JR, Muñoz LS, Gorman MP, Benson LA, Thomas DL, Pardo CA, Milstone AM, Duggal P.

JAMA Pediatr. 2019 Feb 1;173(2):134-139. doi: 10.1001/jamapediatrics.2018.4890.


Effect of pH on solubility of white Mineral Trioxide Aggregate and Biodentine: An in vitro study.

Pushpa S, Maheshwari C, Maheshwari G, Sridevi N, Duggal P, Ahuja P.

J Dent Res Dent Clin Dent Prospects. 2018 Summer;12(3):201-207. doi: 10.15171/joddd.2018.031. Epub 2018 Sep 18.


A high-throughput sequencing assay to comprehensively detect and characterize unicellular eukaryotes and helminths from biological and environmental samples.

Cannon MV, Bogale H, Rutt L, Humphrys M, Korpe P, Duggal P, Ravel J, Serre D.

Microbiome. 2018 Oct 29;6(1):195. doi: 10.1186/s40168-018-0581-6.


Genome-Wide Association Study Reveals Genetic Link between Diarrhea-Associated Entamoeba histolytica Infection and Inflammatory Bowel Disease.

Wojcik GL, Marie C, Abhyankar MM, Yoshida N, Watanabe K, Mentzer AJ, Carstensen T, Mychaleckyj J, Kirkpatrick BD, Rich SS, Concannon P, Haque R, Tsokos GC, Petri WA Jr, Duggal P.

MBio. 2018 Sep 18;9(5). pii: e01668-18. doi: 10.1128/mBio.01668-18.


Refraction and Change in Refraction Over a 20-Year Period in the Beaver Dam Eye Study.

Bomotti S, Lau B, Klein BEK, Lee KE, Klein R, Duggal P, Klein AP.

Invest Ophthalmol Vis Sci. 2018 Sep 4;59(11):4518-4524. doi: 10.1167/iovs.18-23914.


Case-Control Study of Cryptosporidium Transmission in Bangladeshi Households.

Korpe PS, Gilchrist C, Burkey C, Taniuchi M, Ahmed E, Madan V, Castillo R, Ahmed S, Arju T, Alam M, Kabir M, Ahmed T, Petri WA, Haque R, Faruque ASG, Duggal P.

Clin Infect Dis. 2019 Mar 19;68(7):1073-1079. doi: 10.1093/cid/ciy593.


Epidemiology at a time for unity.

Lau B, Duggal P, Ehrhardt S.

Int J Epidemiol. 2018 Oct 1;47(5):1366-1371. doi: 10.1093/ije/dyy179. No abstract available. Erratum in: Int J Epidemiol. 2019 Feb 1;48(1):321.


Association analysis of exome variants and refraction, axial length, and corneal curvature in a European-American population.

Vergara C, Bomotti SM, Valencia C, Klein BEK, Lee KE, Klein R, Klein AP, Duggal P.

Hum Mutat. 2018 Dec;39(12):1973-1979. doi: 10.1002/humu.23628. Epub 2018 Sep 11.


Does Malnutrition Have a Genetic Component?

Duggal P, Petri WA Jr.

Annu Rev Genomics Hum Genet. 2018 Aug 31;19:247-262. doi: 10.1146/annurev-genom-083117-021340. Epub 2018 Jun 6. Review.


Genome-Wide Association Study of Serum Fructosamine and Glycated Albumin in Adults Without Diagnosed Diabetes: Results From the Atherosclerosis Risk in Communities Study.

Loomis SJ, Li M, Maruthur NM, Baldridge AS, North KE, Mei H, Morrison A, Carson AP, Pankow JS, Boerwinkle E, Scharpf R, Rasmussen-Torvik LJ, Coresh J, Duggal P, Köttgen A, Selvin E.

Diabetes. 2018 Aug;67(8):1684-1696. doi: 10.2337/db17-1362. Epub 2018 May 29.


Epidemiology and Risk Factors for Cryptosporidiosis in Children From 8 Low-income Sites: Results From the MAL-ED Study.

Korpe PS, Valencia C, Haque R, Mahfuz M, McGrath M, Houpt E, Kosek M, McCormick BJJ, Penataro Yori P, Babji S, Kang G, Lang D, Gottlieb M, Samie A, Bessong P, Faruque ASG, Mduma E, Nshama R, Havt A, Lima IFN, Lima AAM, Bodhidatta L, Shreshtha A, Petri WA Jr, Ahmed T, Duggal P.

Clin Infect Dis. 2018 Nov 13;67(11):1660-1669. doi: 10.1093/cid/ciy355.


Genotype imputation performance of three reference panels using African ancestry individuals.

Vergara C, Parker MM, Franco L, Cho MH, Valencia-Duarte AV, Beaty TH, Duggal P.

Hum Genet. 2018 Apr;137(4):281-292. doi: 10.1007/s00439-018-1881-4. Epub 2018 Apr 10.


Multifaceted remodeling by vitamin C boosts sensitivity of Mycobacterium tuberculosis subpopulations to combination treatment by anti-tubercular drugs.

Sikri K, Duggal P, Kumar C, Batra SD, Vashist A, Bhaskar A, Tripathi K, Sethi T, Singh A, Tyagi JS.

Redox Biol. 2018 May;15:452-466. doi: 10.1016/j.redox.2017.12.020. Epub 2018 Jan 3.


Efficacy of Multimodal Therapy in the Survival Outcomes of Advanced-Stage (Stage III-Stage IV) Oral Carcinoma Patients: An Institutional Experience in Asian Indian Population.

Dhawan A, Duggal P, Bhullar RS, Kaur T, Sandhu A, Kaur K.

J Maxillofac Oral Surg. 2018 Mar;17(1):89-94. doi: 10.1007/s12663-017-1011-1. Epub 2017 Apr 7.


Exome Array Analysis of Nuclear Lens Opacity.

Loomis SJ, Klein AP, Lee KE, Chen F, Bomotti S, Truitt B, Iyengar SK, Klein R, Klein BEK, Duggal P.

Ophthalmic Epidemiol. 2018 Jun;25(3):215-219. doi: 10.1080/09286586.2017.1406122. Epub 2017 Nov 28.


Fine-mapping of genetic loci driving spontaneous clearance of hepatitis C virus infection.

Huang H, Duggal P, Thio CL, Latanich R, Goedert JJ, Mangia A, Cox AL, Kirk GD, Mehta S, Aneja J, Alric L, Donfield SM, Cramp ME, Khakoo SI, Tobler LH, Busch M, Alexander GJ, Rosen HR, Edlin BR, Segal FP, Lauer GM, Thomas DL, Daly MJ, Chung RT, Kim AY.

Sci Rep. 2017 Nov 20;7(1):15843. doi: 10.1038/s41598-017-16011-2.


Whole-Exome Sequencing Identifies the 6q12-q16 Linkage Region and a Candidate Gene, TTK, for Pulmonary Nontuberculous Mycobacterial Disease.

Chen F, Szymanski EP, Olivier KN, Liu X, Tettelin H, Holland SM, Duggal P.

Am J Respir Crit Care Med. 2017 Dec 15;196(12):1599-1604. doi: 10.1164/rccm.201612-2479OC.


Genetic basis for variation in plasma IL-18 levels in persons with chronic hepatitis C virus and human immunodeficiency virus-1 infections.

Vergara C, Thio C, Latanich R, Cox AL, Kirk GD, Mehta SH, Busch M, Murphy EL, Villacres MC, Peters MG, French AL, Golub E, Eron J, Lahiri CD, Shrestha S, Gustafson D, Young M, Anastos K, Aouizerat B, Kim AY, Lauer G, Thomas DL, Duggal P.

Genes Immun. 2017 Mar;18(2):82-87. doi: 10.1038/gene.2017.2. Epub 2017 Mar 16.


Comprehensive candidate gene analysis for symptomatic or asymptomatic outcomes of Leishmania infantum infection in Brazil.

Weirather JL, Duggal P, Nascimento EL, Monteiro GR, Martins DR, Lacerda HG, Fakiola M, Blackwell JM, Jeronimo SM, Wilson ME.

Ann Hum Genet. 2017 Jan;81(1):41-48. doi: 10.1111/ahg.12180. Epub 2017 Jan 4.


Role of nucleotide-binding oligomerization domain 1 (NOD1) and its variants in human cytomegalovirus control in vitro and in vivo.

Fan YH, Roy S, Mukhopadhyay R, Kapoor A, Duggal P, Wojcik GL, Pass RF, Arav-Boger R.

Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7818-E7827. Epub 2016 Nov 16.


MicroRNA-related polymorphisms and non-Hodgkin lymphoma susceptibility in the Multicenter AIDS Cohort Study.

Peckham-Gregory EC, Thapa DR, Martinson J, Duggal P, Penugonda S, Bream JH, Chang PY, Dandekar S, Chang SC, Detels R, Martínez-Maza O, Zhang ZF, Hussain SK.

Cancer Epidemiol. 2016 Dec;45:47-57. doi: 10.1016/j.canep.2016.09.007. Epub 2016 Oct 1.


Variation in PTCHD2, CRISP3, NAP1L4, FSCB, and AP3B2 associated with spherical equivalent.

Chen F, Duggal P, Klein BE, Lee KE, Truitt B, Klein R, Iyengar SK, Klein AP.

Mol Vis. 2016 Jul 14;22:783-96. eCollection 2016.


Fine mapping under linkage peaks for symptomatic or asymptomatic outcomes of Leishmania infantum infection in Brazil.

Weirather JL, Duggal P, Nascimento EL, Monteiro GR, Martins DR, Lacerda HG, Fakiola M, Blackwell JM, Jeronimo SM, Wilson ME.

Infect Genet Evol. 2016 Sep;43:1-5. doi: 10.1016/j.meegid.2016.05.005. Epub 2016 May 4.


Natural History of Cryptosporidiosis in a Longitudinal Study of Slum-Dwelling Bangladeshi Children: Association with Severe Malnutrition.

Korpe PS, Haque R, Gilchrist C, Valencia C, Niu F, Lu M, Ma JZ, Petri SE, Reichman D, Kabir M, Duggal P, Petri WA Jr.

PLoS Negl Trop Dis. 2016 May 4;10(5):e0004564. doi: 10.1371/journal.pntd.0004564. eCollection 2016 May.


Genetic Epidemiology and Public Health: The Evolution From Theory to Technology.

Fallin MD, Duggal P, Beaty TH.

Am J Epidemiol. 2016 Mar 1;183(5):387-93. doi: 10.1093/aje/kww001. Epub 2016 Feb 22.


Lipid levels in HIV-positive men receiving anti-retroviral therapy are not associated with copy number variation of reverse cholesterol transport pathway genes.

Marino RB, Kingsley LA, Hussain SK, Bream JH, Penogonda S, Duggal P, Martinson JJ.

BMC Res Notes. 2015 Nov 21;8:697. doi: 10.1186/s13104-015-1665-z.


Polymorphisms in melanoma differentiation-associated gene 5 are not associated with clearance of hepatitis C virus in a European American population.

Vergara C, Thio CL, Thomas D, Duggal P.

Hepatology. 2016 Mar;63(3):1061-2. doi: 10.1002/hep.27954. Epub 2015 Jul 28. No abstract available.


Pulmonary Nontuberculous Mycobacterial Infection. A Multisystem, Multigenic Disease.

Szymanski EP, Leung JM, Fowler CJ, Haney C, Hsu AP, Chen F, Duggal P, Oler AJ, McCormack R, Podack E, Drummond RA, Lionakis MS, Browne SK, Prevots DR, Knowles M, Cutting G, Liu X, Devine SE, Fraser CM, Tettelin H, Olivier KN, Holland SM.

Am J Respir Crit Care Med. 2015 Sep 1;192(5):618-28. doi: 10.1164/rccm.201502-0387OC.


Relative performance of gene- and pathway-level methods as secondary analyses for genome-wide association studies.

Wojcik GL, Kao WH, Duggal P.

BMC Genet. 2015 Apr 8;16:34. doi: 10.1186/s12863-015-0191-2.


Gene-Gene Interaction Among WNT Genes for Oral Cleft in Trios.

Li Q, Kim Y, Suktitipat B, Hetmanski JB, Marazita ML, Duggal P, Beaty TH, Bailey-Wilson JE.

Genet Epidemiol. 2015 Jul;39(5):385-94. doi: 10.1002/gepi.21888. Epub 2015 Feb 6.


Genomics and infectious disease: a call to identify the ethical, legal and social implications for public health and clinical practice.

Geller G, Dvoskin R, Thio CL, Duggal P, Lewis MH, Bailey TC, Sutherland A, Salmon DA, Kahn JP.

Genome Med. 2014 Nov 18;6(11):106. doi: 10.1186/s13073-014-0106-2. eCollection 2014.


Exome array analysis identifies CAV1/CAV2 as a susceptibility locus for intraocular pressure.

Chen F, Klein AP, Klein BE, Lee KE, Truitt B, Klein R, Iyengar SK, Duggal P.

Invest Ophthalmol Vis Sci. 2014 Dec 18;56(1):544-51. doi: 10.1167/iovs.14-15204.


Association between ACVR2A and early-onset preeclampsia: replication study in a Northeastern Brazilian population.

Ferreira LC, Gomes CE, Araújo AC, Bezerra PF, Duggal P, Jeronimo SM.

Placenta. 2015 Feb;36(2):186-90. doi: 10.1016/j.placenta.2014.11.007. Epub 2014 Nov 21.


Genome-wide association study of hepatitis C virus- and cryoglobulin-related vasculitis.

Zignego AL, Wojcik GL, Cacoub P, Visentini M, Casato M, Mangia A, Latanich R, Charles ED, Gragnani L, Terrier B, Piazzola V, Dustin LB, Khakoo SI, Busch MP, Lauer GM, Kim AY, Alric L, Thomas DL, Duggal P.

Genes Immun. 2014 Oct;15(7):500-5. doi: 10.1038/gene.2014.41. Epub 2014 Jul 17.


Distinct assembly profiles of HLA-B molecules.

Rizvi SM, Salam N, Geng J, Qi Y, Bream JH, Duggal P, Hussain SK, Martinson J, Wolinsky SM, Carrington M, Raghavan M.

J Immunol. 2014 Jun 1;192(11):4967-76. doi: 10.4049/jimmunol.1301670. Epub 2014 Apr 30.


Admixture analysis of spontaneous hepatitis C virus clearance in individuals of African descent.

Wojcik GL, Thio CL, Kao WH, Latanich R, Goedert JJ, Mehta SH, Kirk GD, Peters MG, Cox AL, Kim AY, Chung RT, Thomas DL, Duggal P.

Genes Immun. 2014 Apr;15(4):241-6. doi: 10.1038/gene.2014.11. Epub 2014 Mar 13.


LILRB2 interaction with HLA class I correlates with control of HIV-1 infection.

Bashirova AA, Martin-Gayo E, Jones DC, Qi Y, Apps R, Gao X, Burke PS, Taylor CJ, Rogich J, Wolinsky S, Bream JH, Duggal P, Hussain S, Martinson J, Weintrob A, Kirk GD, Fellay J, Buchbinder SP, Goedert JJ, Deeks SG, Pereyra F, Trowsdale J, Lichterfeld M, Telenti A, Walker BD, Allen RL, Carrington M, Yu XG.

PLoS Genet. 2014 Mar 6;10(3):e1004196. doi: 10.1371/journal.pgen.1004196. eCollection 2014 Mar.


Role of leptin-mediated colonic inflammation in defense against Clostridium difficile colitis.

Madan R, Guo X, Naylor C, Buonomo EL, Mackay D, Noor Z, Concannon P, Scully KW, Pramoonjago P, Kolling GL, Warren CA, Duggal P, Petri WA Jr.

Infect Immun. 2014 Jan;82(1):341-9. doi: 10.1128/IAI.00972-13. Epub 2013 Oct 28.


Variants in HAVCR1 gene region contribute to hepatitis C persistence in African Americans.

Wojcik G, Latanich R, Mosbruger T, Astemborski J, Kirk GD, Mehta SH, Goedert JJ, Kim AY, Seaberg EC, Busch M, Thomas DL, Duggal P, Thio CL.

J Infect Dis. 2014 Feb 1;209(3):355-9. doi: 10.1093/infdis/jit444. Epub 2013 Aug 20.


Preeclampsia is associated with increased maternal body weight in a northeastern Brazilian population.

Dantas EM, Pereira FV, Queiroz JW, Dantas DL, Monteiro GR, Duggal P, Azevedo Mde F, Jeronimo SM, Araújo AC.

BMC Pregnancy Childbirth. 2013 Aug 8;13:159. doi: 10.1186/1471-2393-13-159.


Chapter 8: Invasive fungal rhinosinusitis.

Duggal P, Wise SK.

Am J Rhinol Allergy. 2013 May-Jun;27 Suppl 1:S28-30. doi: 10.2500/ajra.2013.27.3892. Review.


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