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Items: 1 to 50 of 70

1.

Reefs need richness.

Duffy JE.

Nat Ecol Evol. 2019 Feb;3(2):149-150. doi: 10.1038/s41559-018-0784-z. No abstract available.

PMID:
30664697
2.

Global carbon intensity of crude oil production.

Masnadi MS, El-Houjeiri HM, Schunack D, Li Y, Englander JG, Badahdah A, Monfort JC, Anderson JE, Wallington TJ, Bergerson JA, Gordon D, Koomey J, Przesmitzki S, Azevedo IL, Bi XT, Duffy JE, Heath GA, Keoleian GA, McGlade C, Meehan DN, Yeh S, You F, Wang M, Brandt AR.

Science. 2018 Aug 31;361(6405):851-853. doi: 10.1126/science.aar6859. No abstract available.

PMID:
30166477
3.

BioTIME: A database of biodiversity time series for the Anthropocene.

Dornelas M, Antão LH, Moyes F, Bates AE, Magurran AE, Adam D, Akhmetzhanova AA, Appeltans W, Arcos JM, Arnold H, Ayyappan N, Badihi G, Baird AH, Barbosa M, Barreto TE, Bässler C, Bellgrove A, Belmaker J, Benedetti-Cecchi L, Bett BJ, Bjorkman AD, Błażewicz M, Blowes SA, Bloch CP, Bonebrake TC, Boyd S, Bradford M, Brooks AJ, Brown JH, Bruelheide H, Budy P, Carvalho F, Castañeda-Moya E, Chen CA, Chamblee JF, Chase TJ, Siegwart Collier L, Collinge SK, Condit R, Cooper EJ, Cornelissen JHC, Cotano U, Kyle Crow S, Damasceno G, Davies CH, Davis RA, Day FP, Degraer S, Doherty TS, Dunn TE, Durigan G, Duffy JE, Edelist D, Edgar GJ, Elahi R, Elmendorf SC, Enemar A, Ernest SKM, Escribano R, Estiarte M, Evans BS, Fan TY, Turini Farah F, Loureiro Fernandes L, Farneda FZ, Fidelis A, Fitt R, Fosaa AM, Daher Correa Franco GA, Frank GE, Fraser WR, García H, Cazzolla Gatti R, Givan O, Gorgone-Barbosa E, Gould WA, Gries C, Grossman GD, Gutierréz JR, Hale S, Harmon ME, Harte J, Haskins G, Henshaw DL, Hermanutz L, Hidalgo P, Higuchi P, Hoey A, Van Hoey G, Hofgaard A, Holeck K, Hollister RD, Holmes R, Hoogenboom M, Hsieh CH, Hubbell SP, Huettmann F, Huffard CL, Hurlbert AH, Macedo Ivanauskas N, Janík D, Jandt U, Jażdżewska A, Johannessen T, Johnstone J, Jones J, Jones FAM, Kang J, Kartawijaya T, Keeley EC, Kelt DA, Kinnear R, Klanderud K, Knutsen H, Koenig CC, Kortz AR, Král K, Kuhnz LA, Kuo CY, Kushner DJ, Laguionie-Marchais C, Lancaster LT, Min Lee C, Lefcheck JS, Lévesque E, Lightfoot D, Lloret F, Lloyd JD, López-Baucells A, Louzao M, Madin JS, Magnússon B, Malamud S, Matthews I, McFarland KP, McGill B, McKnight D, McLarney WO, Meador J, Meserve PL, Metcalfe DJ, Meyer CFJ, Michelsen A, Milchakova N, Moens T, Moland E, Moore J, Mathias Moreira C, Müller J, Murphy G, Myers-Smith IH, Myster RW, Naumov A, Neat F, Nelson JA, Paul Nelson M, Newton SF, Norden N, Oliver JC, Olsen EM, Onipchenko VG, Pabis K, Pabst RJ, Paquette A, Pardede S, Paterson DM, Pélissier R, Peñuelas J, Pérez-Matus A, Pizarro O, Pomati F, Post E, Prins HHT, Priscu JC, Provoost P, Prudic KL, Pulliainen E, Ramesh BR, Mendivil Ramos O, Rassweiler A, Rebelo JE, Reed DC, Reich PB, Remillard SM, Richardson AJ, Richardson JP, van Rijn I, Rocha R, Rivera-Monroy VH, Rixen C, Robinson KP, Ribeiro Rodrigues R, de Cerqueira Rossa-Feres D, Rudstam L, Ruhl H, Ruz CS, Sampaio EM, Rybicki N, Rypel A, Sal S, Salgado B, Santos FAM, Savassi-Coutinho AP, Scanga S, Schmidt J, Schooley R, Setiawan F, Shao KT, Shaver GR, Sherman S, Sherry TW, Siciński J, Sievers C, da Silva AC, Rodrigues da Silva F, Silveira FL, Slingsby J, Smart T, Snell SJ, Soudzilovskaia NA, Souza GBG, Maluf Souza F, Castro Souza V, Stallings CD, Stanforth R, Stanley EH, Mauro Sterza J, Stevens M, Stuart-Smith R, Rondon Suarez Y, Supp S, Yoshio Tamashiro J, Tarigan S, Thiede GP, Thorn S, Tolvanen A, Teresa Zugliani Toniato M, Totland Ø, Twilley RR, Vaitkus G, Valdivia N, Vallejo MI, Valone TJ, Van Colen C, Vanaverbeke J, Venturoli F, Verheye HM, Vianna M, Vieira RP, Vrška T, Quang Vu C, Van Vu L, Waide RB, Waldock C, Watts D, Webb S, Wesołowski T, White EP, Widdicombe CE, Wilgers D, Williams R, Williams SB, Williamson M, Willig MR, Willis TJ, Wipf S, Woods KD, Woehler EJ, Zawada K, Zettler ML, Hickler T.

Glob Ecol Biogeogr. 2018 Jul;27(7):760-786. doi: 10.1111/geb.12729. Epub 2018 Jul 24.

4.

Essential ocean variables for global sustained observations of biodiversity and ecosystem changes.

Miloslavich P, Bax NJ, Simmons SE, Klein E, Appeltans W, Aburto-Oropeza O, Andersen Garcia M, Batten SD, Benedetti-Cecchi L, Checkley DM Jr, Chiba S, Duffy JE, Dunn DC, Fischer A, Gunn J, Kudela R, Marsac F, Muller-Karger FE, Obura D, Shin YJ.

Glob Chang Biol. 2018 Apr 5. doi: 10.1111/gcb.14108. [Epub ahead of print]

PMID:
29623683
5.

Corrigendum: Assessing National Biodiversity Trends for Rocky and Coral Reefs through the Integration of Citizen Science and Scientific Monitoring Programs.

Stuart-Smith RD, Edgar GJ, Barrett NS, Bates AE, Baker SC, Bax NJ, Becerro MA, Berkhout J, Blanchard JL, Brock DJ, Clark GF, Cooper AT, Davis TR, Day PB, Duffy JE, Holmes TH, Howe SA, Jordan A, Kininmonth S, Knott NA, Lefcheck JS, Ling SD, Parr A, Strain E, Sweatman H, Thomson R.

Bioscience. 2017 Aug 1;67(8):774. doi: 10.1093/biosci/bix070. Epub 2017 Jul 13.

6.

Allometry of individual reproduction and defense in eusocial colonies: A comparative approach to trade-offs in social sponge-dwelling Synalpheus shrimps.

Bornbusch SL, Lefcheck JS, Duffy JE.

PLoS One. 2018 Mar 14;13(3):e0193305. doi: 10.1371/journal.pone.0193305. eCollection 2018.

7.

Latitude, temperature, and habitat complexity predict predation pressure in eelgrass beds across the Northern Hemisphere.

Reynolds PL, Stachowicz JJ, Hovel K, Boström C, Boyer K, Cusson M, Eklöf JS, Engel FG, Engelen AH, Eriksson BK, Fodrie FJ, Griffin JN, Hereu CM, Hori M, Hanley TC, Ivanov M, Jorgensen P, Kruschel C, Lee KS, McGlathery K, Moksnes PO, Nakaoka M, O'Connor MI, O'Connor NE, Orth RJ, Rossi F, Ruesink J, Sotka EE, Thormar J, Tomas F, Unsworth RKF, Whalen MA, Duffy JE.

Ecology. 2018 Jan;99(1):29-35. doi: 10.1002/ecy.2064.

8.

Abundance and local-scale processes contribute to multi-phyla gradients in global marine diversity.

Edgar GJ, Alexander TJ, Lefcheck JS, Bates AE, Kininmonth SJ, Thomson RJ, Duffy JE, Costello MJ, Stuart-Smith RD.

Sci Adv. 2017 Oct 18;3(10):e1700419. doi: 10.1126/sciadv.1700419. eCollection 2017 Oct.

9.

Ecological generalism facilitates the evolution of sociality in snapping shrimps.

Brooks KC, Maia R, Duffy JE, Hultgren KM, Rubenstein DR.

Ecol Lett. 2017 Dec;20(12):1516-1525. doi: 10.1111/ele.12857. Epub 2017 Oct 4.

PMID:
28980422
10.

Marine dock pilings foster diverse, native cryptobenthic fish assemblages across bioregions.

Brandl SJ, Casey JM, Knowlton N, Duffy JE.

Ecol Evol. 2017 Jul 31;7(17):7069-7079. doi: 10.1002/ece3.3288. eCollection 2017 Sep.

11.

Biodiversity effects in the wild are common and as strong as key drivers of productivity.

Duffy JE, Godwin CM, Cardinale BJ.

Nature. 2017 Sep 14;549(7671):261-264. doi: 10.1038/nature23886. Epub 2017 Sep 6.

PMID:
28869964
12.

Evolutionary transitions towards eusociality in snapping shrimps.

Chak STC, Duffy JE, Hultgren KM, Rubenstein DR.

Nat Ecol Evol. 2017 Mar 20;1(4):96. doi: 10.1038/s41559-017-0096.

PMID:
28812668
13.

Development of genome- and transcriptome-derived microsatellites in related species of snapping shrimps with highly duplicated genomes.

Gaynor KM, Solomon JW, Siller S, Jessell L, Duffy JE, Rubenstein DR.

Mol Ecol Resour. 2017 Nov;17(6):e160-e173. doi: 10.1111/1755-0998.12705. Epub 2017 Sep 5.

PMID:
28776934
14.

Assessing National Biodiversity Trends for Rocky and Coral Reefs through the Integration of Citizen Science and Scientific Monitoring Programs.

Stuart-Smith RD, Edgar GJ, Barrett NS, Bates AE, Baker SC, Bax NJ, Becerro MA, Berkhout J, Blanchard JL, Brock DJ, Clark GF, Cooper AT, Davis TR, Day PB, Duffy JE, Holmes TH, Howe SA, Jordan A, Kininmonth S, Knott NA, Lefcheck JS, Ling SD, Parr A, Strain E, Sweatman H, Thomson R.

Bioscience. 2017 Feb 1;67(2):134-146. doi: 10.1093/biosci/biw180. Erratum in: Bioscience. 2017 Aug 1;67(8):774.

15.

Linking the influence and dependence of people on biodiversity across scales.

Isbell F, Gonzalez A, Loreau M, Cowles J, Díaz S, Hector A, Mace GM, Wardle DA, O'Connor MI, Duffy JE, Turnbull LA, Thompson PL, Larigauderie A.

Nature. 2017 May 31;546(7656):65-72. doi: 10.1038/nature22899. Review.

16.

Biodiversity and human well-being: an essential link for sustainable development.

Naeem S, Chazdon R, Duffy JE, Prager C, Worm B.

Proc Biol Sci. 2016 Dec 14;283(1844). pii: 20162091. Review.

17.

Biodiversity enhances reef fish biomass and resistance to climate change.

Duffy JE, Lefcheck JS, Stuart-Smith RD, Navarrete SA, Edgar GJ.

Proc Natl Acad Sci U S A. 2016 May 31;113(22):6230-5. doi: 10.1073/pnas.1524465113. Epub 2016 May 16.

18.
19.

Social Control of Reproduction and Breeding Monopolization in the Eusocial Snapping Shrimp Synalpheus elizabethae.

Chak ST, Rubenstein DR, Duffy JE.

Am Nat. 2015 Nov;186(5):660-8. doi: 10.1086/683132. Epub 2015 Sep 15.

PMID:
26655778
20.

Squidpops: A Simple Tool to Crowdsource a Global Map of Marine Predation Intensity.

Duffy JE, Ziegler SL, Campbell JE, Bippus PM, Lefcheck JS.

PLoS One. 2015 Nov 24;10(11):e0142994. doi: 10.1371/journal.pone.0142994. eCollection 2015.

21.

Reproductive skew drives patterns of sexual dimorphism in sponge-dwelling snapping shrimps.

Chak ST, Duffy JE, Rubenstein DR.

Proc Biol Sci. 2015 Jun 22;282(1809):20150342. doi: 10.1098/rspb.2015.0342.

22.

Biodiversity mediates top-down control in eelgrass ecosystems: a global comparative-experimental approach.

Duffy JE, Reynolds PL, Boström C, Coyer JA, Cusson M, Donadi S, Douglass JG, Eklöf JS, Engelen AH, Eriksson BK, Fredriksen S, Gamfeldt L, Gustafsson C, Hoarau G, Hori M, Hovel K, Iken K, Lefcheck JS, Moksnes PO, Nakaoka M, O'Connor MI, Olsen JL, Richardson JP, Ruesink JL, Sotka EE, Thormar J, Whalen MA, Stachowicz JJ.

Ecol Lett. 2015 Jul;18(7):696-705. doi: 10.1111/ele.12448. Epub 2015 May 17.

PMID:
25983129
23.

Biodiversity enhances ecosystem multifunctionality across trophic levels and habitats.

Lefcheck JS, Byrnes JEK, Isbell F, Gamfeldt L, Griffin JN, Eisenhauer N, Hensel MJS, Hector A, Cardinale BJ, Duffy JE.

Nat Commun. 2015 Apr 24;6:6936. doi: 10.1038/ncomms7936.

24.

Integrating abundance and functional traits reveals new global hotspots of fish diversity.

Stuart-Smith RD, Bates AE, Lefcheck JS, Duffy JE, Baker SC, Thomson RJ, Stuart-Smith JF, Hill NA, Kininmonth SJ, Airoldi L, Becerro MA, Campbell SJ, Dawson TP, Navarrete SA, Soler GA, Strain EM, Willis TJ, Edgar GJ.

Nature. 2013 Sep 26;501(7468):539-42. doi: 10.1038/nature12529.

PMID:
24067714
25.

Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem.

Whalen MA, Duffy JE, Grace JB.

Ecology. 2013 Feb;94(2):510-20.

PMID:
23691669
26.

Physiological effects of diet mixing on consumer fitness: a meta-analysis.

Lefcheck JS, Whalen MA, Davenport TM, Stone JP, Duffy JE.

Ecology. 2013 Mar;94(3):565-72.

PMID:
23687882
27.

Open-source LCA tool for estimating greenhouse gas emissions from crude oil production using field characteristics.

El-Houjeiri HM, Brandt AR, Duffy JE.

Environ Sci Technol. 2013 Jun 4;47(11):5998-6006. doi: 10.1021/es304570m. Epub 2013 May 14.

PMID:
23634761
28.

Decline and local extinction of Caribbean eusocial shrimp.

Duffy JE, Macdonald KS 3rd, Hultgren KM, Chak TC, Rubenstein DR.

PLoS One. 2013;8(2):e54637. doi: 10.1371/journal.pone.0054637. Epub 2013 Feb 13.

29.

Discovery of selective and potent inhibitors of gram-positive bacterial thymidylate kinase (TMK).

Martínez-Botella G, Breen JN, Duffy JE, Dumas J, Geng B, Gowers IK, Green OM, Guler S, Hentemann MF, Hernandez-Juan FA, Joseph-McCarthy D, Kawatkar S, Larsen NA, Lazari O, Loch JT, Macritchie JA, McKenzie AR, Newman JV, Olivier NB, Otterson LG, Owens AP, Read J, Sheppard DW, Keating TA.

J Med Chem. 2012 Nov 26;55(22):10010-21. doi: 10.1021/jm3011806. Epub 2012 Oct 24.

PMID:
23043329
30.

The functions of biological diversity in an age of extinction.

Naeem S, Duffy JE, Zavaleta E.

Science. 2012 Jun 15;336(6087):1401-6. doi: 10.1126/science.1215855. Review.

PMID:
22700920
31.

A global synthesis reveals biodiversity loss as a major driver of ecosystem change.

Hooper DU, Adair EC, Cardinale BJ, Byrnes JE, Hungate BA, Matulich KL, Gonzalez A, Duffy JE, Gamfeldt L, O'Connor MI.

Nature. 2012 May 2;486(7401):105-8. doi: 10.1038/nature11118.

PMID:
22678289
32.

Biodiversity loss and its impact on humanity.

Cardinale BJ, Duffy JE, Gonzalez A, Hooper DU, Perrings C, Venail P, Narwani A, Mace GM, Tilman D, Wardle DA, Kinzig AP, Daily GC, Loreau M, Grace JB, Larigauderie A, Srivastava DS, Naeem S.

Nature. 2012 Jun 6;486(7401):59-67. doi: 10.1038/nature11148. Review. Erratum in: Nature. 2012 Sep 13;489(7415):326.

PMID:
22678280
33.

Global patterns in the impact of marine herbivores on benthic primary producers.

Poore AG, Campbell AH, Coleman RA, Edgar GJ, Jormalainen V, Reynolds PL, Sotka EE, Stachowicz JJ, Taylor RB, Vanderklift MA, Duffy JE.

Ecol Lett. 2012 Aug;15(8):912-22. doi: 10.1111/j.1461-0248.2012.01804.x. Epub 2012 May 29.

PMID:
22639820
34.

Phylogenetic community ecology and the role of social dominance in sponge-dwelling shrimp.

Hultgren KM, Duffy JE.

Ecol Lett. 2012 Jul;15(7):704-13. doi: 10.1111/j.1461-0248.2012.01788.x. Epub 2012 May 2.

PMID:
22548770
35.

Climate change impacts on marine ecosystems.

Doney SC, Ruckelshaus M, Duffy JE, Barry JP, Chan F, English CA, Galindo HM, Grebmeier JM, Hollowed AB, Knowlton N, Polovina J, Rabalais NN, Sydeman WJ, Talley LD.

Ann Rev Mar Sci. 2012;4:11-37. Review.

PMID:
22457967
36.

Food chain length and omnivory determine the stability of a marine subtidal food web.

Long ZT, Bruno JF, Duffy JE.

J Anim Ecol. 2011 May;80(3):586-94. doi: 10.1111/j.1365-2656.2010.01800.x. Epub 2011 Jan 20.

PMID:
21250990
37.

Biofuels: algae.

Duffy JE, Canuel EA, Adey W, Swaddle JP.

Science. 2009 Dec 4;326(5958):1345; author reply 1346. doi: 10.1126/science.326.5958.1345-a. No abstract available.

PMID:
19965739
38.

Kin structure, ecology and the evolution of social organization in shrimp: a comparative analysis.

Duffy JE, Macdonald KS.

Proc Biol Sci. 2010 Feb 22;277(1681):575-84. doi: 10.1098/rspb.2009.1483. Epub 2009 Nov 4.

39.

Nutrient enrichment and food web composition affect ecosystem metabolism in an experimental seagrass habitat.

Spivak AC, Canuel EA, Duffy JE, Richardson JP.

PLoS One. 2009 Oct 15;4(10):e7473. doi: 10.1371/journal.pone.0007473.

40.

Diversity has stronger top-down than bottom-up effects on decomposition.

Srivastava DS, Cardinale BJ, Downing AL, Duffy JE, Jouseau C, Sankaran M, Wright JP.

Ecology. 2009 Apr;90(4):1073-83.

PMID:
19449701
41.

The Relationship Between Noncoplanar PCB-Induced Immunotoxicity and Hepatic CYP1A Induction in a Fish Model.

Duffy JE, Zelikoff JT.

J Immunotoxicol. 2006 Jan 1;3(1):39-47. doi: 10.1080/15476910500514230.

PMID:
18958684
42.

Relative and interactive effects of plant and grazer richness in a benthic marine community.

Bruno JF, Boyer KE, Duffy JE, Lee SC.

Ecology. 2008 Sep;89(9):2518-28.

PMID:
18831173
43.

Correction of statistical miscalculation slightly alters conclusions about diversity effects for Douglass et al. (2008).

Douglass JG, Duffy JE, Bruno JF, Gilchrist GW.

Ecol Lett. 2008 Sep;11(9):E9-10. doi: 10.1111/j.1461-0248.2008.01227.x. Epub 2008 Jul 18.

PMID:
18657171
44.

Microsatellite development suggests evidence of polyploidy in the social sponge-dwelling snapping shrimp Zuzalpheus brooksi.

Rubenstein DR, McCleery BV, Duffy JE.

Mol Ecol Resour. 2008 Jul;8(4):890-4. doi: 10.1111/j.1755-0998.2008.02100.x.

PMID:
21585921
45.

Herbivore and predator diversity interactively affect ecosystem properties in an experimental marine community.

Douglass JG, Duffy JE, Bruno JF.

Ecol Lett. 2008 Jun;11(6):598-608. doi: 10.1111/j.1461-0248.2008.01175.x. Epub 2008 Mar 26.

PMID:
18371090
46.

Biodiversity mediates productivity through different mechanisms at adjacent trophic levels.

Long ZT, Bruno JF, Duffy JE.

Ecology. 2007 Nov;88(11):2821-9.

PMID:
18051651
47.

The functional role of biodiversity in ecosystems: incorporating trophic complexity.

Duffy JE, Cardinale BJ, France KE, McIntyre PB, Thébault E, Loreau M.

Ecol Lett. 2007 Jun;10(6):522-38.

PMID:
17498151
48.

Coordinated group response to nest intruders in social shrimp.

Tóth E, Duffy JE.

Biol Lett. 2005 Mar 22;1(1):49-52.

49.

Impacts of biodiversity loss on ocean ecosystem services.

Worm B, Barbier EB, Beaumont N, Duffy JE, Folke C, Halpern BS, Jackson JB, Lotze HK, Micheli F, Palumbi SR, Sala E, Selkoe KA, Stachowicz JJ, Watson R.

Science. 2006 Nov 3;314(5800):787-90.

50.

Effects of biodiversity on the functioning of trophic groups and ecosystems.

Cardinale BJ, Srivastava DS, Duffy JE, Wright JP, Downing AL, Sankaran M, Jouseau C.

Nature. 2006 Oct 26;443(7114):989-92.

PMID:
17066035

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