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Items: 1 to 50 of 663

1.

Real-time characterization of spectral instabilities in a mode-locked fibre laser exhibiting soliton-similariton dynamics.

Lapre C, Billet C, Meng F, Ryczkowski P, Sylvestre T, Finot C, Genty G, Dudley JM.

Sci Rep. 2019 Sep 27;9(1):13950. doi: 10.1038/s41598-019-50022-5.

2.

Accuracy of Autism Screening in a Large Pediatric Network.

Guthrie W, Wallis K, Bennett A, Brooks E, Dudley J, Gerdes M, Pandey J, Levy SE, Schultz RT, Miller JS.

Pediatrics. 2019 Oct;144(4). pii: e20183963. doi: 10.1542/peds.2018-3963.

PMID:
31562252
3.

Self-valuation: Attending to the Most Important Instrument in the Practice of Medicine.

Trockel MT, Hamidi MS, Menon NK, Rowe SG, Dudley JC, Stewart MT, Geisler CZ, Bohman BD, Shanafelt TD.

Mayo Clin Proc. 2019 Oct;94(10):2022-2031. doi: 10.1016/j.mayocp.2019.04.040. Epub 2019 Sep 19.

PMID:
31543254
4.

Ghost optical coherence tomography.

Amiot CG, Ryczkowski P, Friberg AT, Dudley JM, Genty G.

Opt Express. 2019 Aug 19;27(17):24114-24122. doi: 10.1364/OE.27.024114.

PMID:
31510305
5.

Integrative transcriptome imputation reveals tissue-specific and shared biological mechanisms mediating susceptibility to complex traits.

Zhang W, Voloudakis G, Rajagopal VM, Readhead B, Dudley JT, Schadt EE, Björkegren JLM, Kim Y, Fullard JF, Hoffman GE, Roussos P.

Nat Commun. 2019 Aug 23;10(1):3834. doi: 10.1038/s41467-019-11874-7.

6.

Electrical stimulation mapping of language with stereo-EEG.

Arya R, Ervin B, Dudley J, Buroker J, Rozhkov L, Scholle C, Horn PS, Vannest J, Byars AW, Leach JL, Mangano FT, Greiner HM, Holland KD, Glauser TA.

Epilepsy Behav. 2019 Aug 15;99:106395. doi: 10.1016/j.yebeh.2019.06.038. [Epub ahead of print]

PMID:
31422309
7.

Individual short-acting opioids and the risk of opioid-related adverse events in adolescents.

Chung CP, Callahan ST, Cooper WO, Dupont WD, Murray KT, Franklin AD, Hall K, Dudley JA, Stein CM, Ray WA.

Pharmacoepidemiol Drug Saf. 2019 Aug 16. doi: 10.1002/pds.4872. [Epub ahead of print]

PMID:
31418512
8.

Privacy-Preserving Methods for Feature Engineering Using Blockchain: Review, Evaluation, and Proof of Concept.

Jones M, Johnson M, Shervey M, Dudley JT, Zimmerman N.

J Med Internet Res. 2019 Aug 14;21(8):e13600. doi: 10.2196/13600.

9.

A Protein Antagonist of Activation-Induced Cytidine Deaminase Encoded by a Complex Mouse Retrovirus.

Singh GB, Byun H, Ali AF, Medina F, Wylie D, Shivram H, Nash AK, Lozano MM, Dudley JP.

MBio. 2019 Aug 13;10(4). pii: e01678-19. doi: 10.1128/mBio.01678-19.

10.

Alterations in knee sensorimotor brain functional connectivity contributes to ACL injury in male high-school football players: a prospective neuroimaging analysis.

Diekfuss JA, Grooms DR, Nissen KS, Schneider DK, Foss KDB, Thomas S, Bonnette S, Dudley JA, Yuan W, Reddington DL, Ellis JD, Leach J, Gordon M, Lindsey C, Rushford K, Shafer C, Myer GD.

Braz J Phys Ther. 2019 Jul 17. pii: S1413-3555(18)31043-8. doi: 10.1016/j.bjpt.2019.07.004. [Epub ahead of print]

PMID:
31377125
11.

Integrative analysis of loss-of-function variants in clinical and genomic data reveals novel genes associated with cardiovascular traits.

Glicksberg BS, Amadori L, Akers NK, Sukhavasi K, Franzén O, Li L, Belbin GM, Akers KL, Shameer K, Badgeley MA, Johnson KW, Readhead B, Darrow BJ, Kenny EE, Betsholtz C, Ermel R, Skogsberg J, Ruusalepp A, Schadt EE, Dudley JT, Ren H, Kovacic JC, Giannarelli C, Li SD, Björkegren JLM, Chen R.

BMC Med Genomics. 2019 Jul 25;12(Suppl 6):108. doi: 10.1186/s12920-019-0542-3.

12.

Deep learning predicts hip fracture using confounding patient and healthcare variables.

Badgeley MA, Zech JR, Oakden-Rayner L, Glicksberg BS, Liu M, Gale W, McConnell MV, Percha B, Snyder TM, Dudley JT.

NPJ Digit Med. 2019 Apr 30;2:31. doi: 10.1038/s41746-019-0105-1. eCollection 2019.

13.

Reflecting health: smart mirrors for personalized medicine.

Miotto R, Danieletto M, Scelza JR, Kidd BA, Dudley JT.

NPJ Digit Med. 2018 Nov 8;1:62. doi: 10.1038/s41746-018-0068-7. eCollection 2018. Review.

14.

A Novel Approach to Evaluate Brain Activation for Lower Extremity Motor Control.

Grooms DR, Diekfuss JA, Ellis JD, Yuan W, Dudley J, Foss KDB, Thomas S, Altaye M, Haas L, Williams B, Lanier JM, Bridgewater K, Myer GD.

J Neuroimaging. 2019 Sep;29(5):580-588. doi: 10.1111/jon.12645. Epub 2019 Jul 3.

PMID:
31270890
15.

Genome-wide analysis indicates association between heterozygote advantage and healthy aging in humans.

Xu K, Kosoy R, Shameer K, Kumar S, Liu L, Readhead B, Belbin GM, Lee HC, Chen R, Dudley JT.

BMC Genet. 2019 Jul 2;20(1):52. doi: 10.1186/s12863-019-0758-4.

16.

Increased Severity of Neonatal Abstinence Syndrome Associated With Concomitant Antenatal Opioid and Benzodiazepine Exposure.

Sanlorenzo LA, Cooper WO, Dudley JA, Stratton S, Maalouf FI, Patrick SW.

Hosp Pediatr. 2019 Aug;9(8):569-575. doi: 10.1542/hpeds.2018-0227. Epub 2019 Jul 1.

PMID:
31262946
17.

Transcriptomic Network Interactions in Human Skin Treated with Topical Glucocorticoid Clobetasol Propionate.

Lili LN, Klopot A, Readhead B, Baida G, Dudley JT, Budunova I.

J Invest Dermatol. 2019 Jun 25. pii: S0022-202X(19)31629-X. doi: 10.1016/j.jid.2019.04.021. [Epub ahead of print]

PMID:
31247200
18.

PatientExploreR: an extensible application for dynamic visualization of patient clinical history from Electronic Health Records in the OMOP Common Data Model Title.

Glicksberg BS, Oskotsky B, Thangaraj PM, Giangreco N, Badgeley MA, Johnson KW, Datta D, Rudrapatna V, Rappoport N, Shervey MM, Miotto R, Goldstein TC, Rutenberg E, Frazier R, Lee N, Israni S, Larsen R, Percha B, Li L, Dudley JT, Tatonetti NP, Butte AJ.

Bioinformatics. 2019 Jun 19. pii: btz409. doi: 10.1093/bioinformatics/btz409. [Epub ahead of print]

PMID:
31214700
19.

Sepsis in the era of data-driven medicine: personalizing risks, diagnoses, treatments and prognoses.

Liu AC, Patel K, Vunikili RD, Johnson KW, Abdu F, Belman SK, Glicksberg BS, Tandale P, Fontanez R, Mathew OK, Kasarskis A, Mukherjee P, Subramanian L, Dudley JT, Shameer K.

Brief Bioinform. 2019 Jun 11. pii: bbz059. doi: 10.1093/bib/bbz059. [Epub ahead of print]

PMID:
31190075
20.

Functional Connectivity of Attention, Visual, and Language Networks During Audio, Illustrated, and Animated Stories in Preschool-Age Children.

Hutton JS, Dudley J, Horowitz-Kraus T, DeWitt T, Holland SK.

Brain Connect. 2019 Sep;9(7):580-592. doi: 10.1089/brain.2019.0679. Epub 2019 Jul 1.

PMID:
31144523
21.

Comparison of whole brain segmentation and volume estimation in children and young adults using SPM and SyMRI.

Serai SD, Dudley J, Leach JL.

Clin Imaging. 2019 Sep - Oct;57:77-82. doi: 10.1016/j.clinimag.2019.05.008. Epub 2019 May 21.

PMID:
31136882
22.

A transcriptomic model to predict increase in fibrous cap thickness in response to high-dose statin treatment: Validation by serial intracoronary OCT imaging.

Johnson KW, Glicksberg BS, Shameer K, Vengrenyuk Y, Krittanawong C, Russak AJ, Sharma SK, Narula JN, Dudley JT, Kini AS.

EBioMedicine. 2019 Jun;44:41-49. doi: 10.1016/j.ebiom.2019.05.007. Epub 2019 May 22.

23.

Machine Learning Prediction of Liver Stiffness Using Clinical and T2-Weighted MRI Radiomic Data.

He L, Li H, Dudley JA, Maloney TC, Brady SL, Somasundaram E, Trout AT, Dillman JR.

AJR Am J Roentgenol. 2019 Sep;213(3):592-601. doi: 10.2214/AJR.19.21082. Epub 2019 May 23.

PMID:
31120779
24.

International consensus statement on the diagnosis and management of autosomal dominant polycystic kidney disease in children and young people.

Gimpel C, Bergmann C, Bockenhauer D, Breysem L, Cadnapaphornchai MA, Cetiner M, Dudley J, Emma F, Konrad M, Harris T, Harris PC, König J, Liebau MC, Marlais M, Mekahli D, Metcalfe AM, Oh J, Perrone RD, Sinha MD, Titieni A, Torra R, Weber S, Winyard PJD, Schaefer F.

Nat Rev Nephrol. 2019 May 22. doi: 10.1038/s41581-019-0155-2. [Epub ahead of print] Review.

PMID:
31118499
25.

Changes in Spinal Height After Manual Axial Traction or Side Lying: A Clinical Measure of Intervertebral Disc Hydration Using Stadiometry.

Rubinic DM, Koo V, Dudley J, Owens SC.

J Manipulative Physiol Ther. 2019 Mar - Apr;42(3):187-194. doi: 10.1016/j.jmpt.2019.03.005. Epub 2019 May 9. Spanish.

PMID:
31078315
26.

Natural Language Processing of Clinical Notes on Chronic Diseases: Systematic Review.

Sheikhalishahi S, Miotto R, Dudley JT, Lavelli A, Rinaldi F, Osmani V.

JMIR Med Inform. 2019 Apr 27;7(2):e12239. doi: 10.2196/12239. Review.

27.

Diffusion Tensor Imaging in Athletes Sustaining Repetitive Head Impacts: A Systematic Review of Prospective Studies.

Schneider DK, Galloway R, Bazarian JJ, Diekfuss JA, Dudley J, Leach JL, Mannix R, Talavage TM, Yuan W, Myer GD.

J Neurotrauma. 2019 Oct 15;36(20):2831-2849. doi: 10.1089/neu.2019.6398. Epub 2019 Jun 27.

PMID:
31062655
28.

Systems Pharmacology Identifies an Arterial Wall Regulatory Gene Network Mediating Coronary Artery Disease Side Effects of Antiretroviral Therapy.

Frades I, Readhead B, Amadori L, Koplev S, Talukdar HA, Crane HM, Crane PK, Kovacic JC, Dudley JT, Giannarelli C, Björkegren JLM, Peter I.

Circ Genom Precis Med. 2019 Jun;12(6):e002390. doi: 10.1161/CIRCGEN.118.002390. Epub 2019 May 6.

PMID:
31059280
29.

Clinical practice guideline monitoring children and young people with, or at risk of developing autosomal dominant polycystic kidney disease (ADPKD).

Dudley J, Winyard P, Marlais M, Cuthell O, Harris T, Chong J, Sayer J, Gale DP, Moore L, Turner K, Burrows S, Sandford R.

BMC Nephrol. 2019 Apr 30;20(1):148. doi: 10.1186/s12882-019-1285-2.

30.

Detection of Solid Tumor Molecular Residual Disease (MRD) Using Circulating Tumor DNA (ctDNA).

Chin RI, Chen K, Usmani A, Chua C, Harris PK, Binkley MS, Azad TD, Dudley JC, Chaudhuri AA.

Mol Diagn Ther. 2019 Jun;23(3):311-331. doi: 10.1007/s40291-019-00390-5. Review.

31.

Designing Robust N-of-1 Studies for Precision Medicine: Simulation Study and Design Recommendations.

Percha B, Baskerville EB, Johnson M, Dudley JT, Zimmerman N.

J Med Internet Res. 2019 Apr 1;21(4):e12641. doi: 10.2196/12641.

32.

A Man With Headache, Fever, and Neck Stiffness.

Cooper R, Dudley J, Farmakiotis D.

JAMA. 2019 Apr 23;321(16):1624-1625. doi: 10.1001/jama.2019.1772. No abstract available.

PMID:
30924841
33.

The influence of different cement spaces on the marginal gap of CAD/CAM all-ceramic crowns.

Zhang Y, Dudley J.

Aust Dent J. 2019 Jun;64(2):167-174. doi: 10.1111/adj.12688. Epub 2019 Apr 3.

PMID:
30883797
34.

Lyme Disease Patient Trajectories Learned from Electronic Medical Data for Stratification of Disease Risk and Therapeutic Response.

Ichikawa O, Glicksberg BS, Genes N, Kidd BA, Li L, Dudley JT.

Sci Rep. 2019 Mar 14;9(1):4460. doi: 10.1038/s41598-019-41128-x.

35.

Evaluation of patient re-identification using laboratory test orders and mitigation via latent space variables.

Johnson KW, De Freitas JK, Glicksberg BS, Bobe JR, Dudley JT.

Pac Symp Biocomput. 2019;24:415-426.

36.

Predicting Future Cardiovascular Events in Patients With Peripheral Artery Disease Using Electronic Health Record Data.

Ross EG, Jung K, Dudley JT, Li L, Leeper NJ, Shah NH.

Circ Cardiovasc Qual Outcomes. 2019 Mar;12(3):e004741. doi: 10.1161/CIRCOUTCOMES.118.004741.

PMID:
30857412
37.

Leveraging Big Data to Transform Drug Discovery.

Glicksberg BS, Li L, Chen R, Dudley J, Chen B.

Methods Mol Biol. 2019;1939:91-118. doi: 10.1007/978-1-4939-9089-4_6.

PMID:
30848458
38.

NAA10 polyadenylation signal variants cause syndromic microphthalmia.

Johnston JJ, Williamson KA, Chou CM, Sapp JC, Ansari M, Chapman HM, Cooper DN, Dabir T, Dudley JN, Holt RJ, Ragge NK, Schäffer AA, Sen SK, Slavotinek AM, FitzPatrick DR, Glaser TM, Stewart F, Black GC, Biesecker LG.

J Med Genet. 2019 Jul;56(7):444-452. doi: 10.1136/jmedgenet-2018-105836. Epub 2019 Mar 6.

39.

Phase evolution of Peregrine-like breathers in optics and hydrodynamics.

Xu G, Hammani K, Chabchoub A, Dudley JM, Kibler B, Finot C.

Phys Rev E. 2019 Jan;99(1-1):012207. doi: 10.1103/PhysRevE.99.012207.

PMID:
30780298
40.

PI3K inhibitors protect against glucocorticoid-induced skin atrophy.

Agarwal S, Mirzoeva S, Readhead B, Dudley JT, Budunova I.

EBioMedicine. 2019 Mar;41:526-537. doi: 10.1016/j.ebiom.2019.01.055. Epub 2019 Feb 5.

41.

Precision Medicine for Relapsed Multiple Myeloma on the Basis of an Integrative Multiomics Approach.

Laganà A, Beno I, Melnekoff D, Leshchenko V, Madduri D, Ramdas D, Sanchez L, Niglio S, Perumal D, Kidd BA, Miotto R, Shaknovich R, Chari A, Cho HJ, Barlogie B, Jagannath S, Dudley JT, Parekh S.

JCO Precis Oncol. 2018;2018. doi: 10.1200/PO.18.00019. Epub 2018 Aug 8.

42.

Association Among County-Level Economic Factors, Clinician Supply, Metropolitan or Rural Location, and Neonatal Abstinence Syndrome.

Patrick SW, Faherty LJ, Dick AW, Scott TA, Dudley J, Stein BD.

JAMA. 2019 Jan 29;321(4):385-393. doi: 10.1001/jama.2018.20851.

43.

An Academic Medical Center-Based Incubator to Promote Clinical Innovation and Financial Value.

Rotenstein LS, Wickner P, Hauser L, Littlefield M, Abbett S, Desrosiers J, Bates DW, Dudley J, Laskowski KR.

Jt Comm J Qual Patient Saf. 2019 Apr;45(4):259-267. doi: 10.1016/j.jcjq.2018.12.004. Epub 2019 Jan 19.

PMID:
30665836
44.

Association of Hemoglobin A1c Levels With Use of Sulfonylureas, Dipeptidyl Peptidase 4 Inhibitors, and Thiazolidinediones in Patients With Type 2 Diabetes Treated With Metformin: Analysis From the Observational Health Data Sciences and Informatics Initiative.

Vashisht R, Jung K, Schuler A, Banda JM, Park RW, Jin S, Li L, Dudley JT, Johnson KW, Shervey MM, Xu H, Wu Y, Natrajan K, Hripcsak G, Jin P, Van Zandt M, Reckard A, Reich CG, Weaver J, Schuemie MJ, Ryan PB, Callahan A, Shah NH.

JAMA Netw Open. 2018 Aug 3;1(4):e181755. doi: 10.1001/jamanetworkopen.2018.1755.

45.

Detection and Surveillance of Bladder Cancer Using Urine Tumor DNA.

Dudley JC, Schroers-Martin J, Lazzareschi DV, Shi WY, Chen SB, Esfahani MS, Trivedi D, Chabon JJ, Chaudhuri AA, Stehr H, Liu CL, Lim H, Costa HA, Nabet BY, Sin MLY, Liao JC, Alizadeh AA, Diehn M.

Cancer Discov. 2019 Apr;9(4):500-509. doi: 10.1158/2159-8290.CD-18-0825. Epub 2018 Dec 21.

PMID:
30578357
46.

Methods for detecting Zika virus in feces: A case study in captive squirrel monkeys (Saimiri boliviensis boliviensis).

Milich KM, Koestler BJ, Simmons JH, Nehete PN, Di Fiore A, Williams LE, Dudley JP, Vanchiere J, Payne SM.

PLoS One. 2018 Dec 20;13(12):e0209391. doi: 10.1371/journal.pone.0209391. eCollection 2018.

47.

Maternal reading fluency is associated with functional connectivity between the child's future reading network and regions related to executive functions and language processing in preschool-age children.

Greenwood P, Hutton J, Dudley J, Horowitz-Kraus T.

Brain Cogn. 2019 Apr;131:87-93. doi: 10.1016/j.bandc.2018.11.010. Epub 2018 Dec 13.

PMID:
30553572
48.

Positive Predictive Value of Administrative Data for Neonatal Abstinence Syndrome.

Maalouf FI, Cooper WO, Stratton SM, Dudley JA, Ko J, Banerji A, Patrick SW.

Pediatrics. 2019 Jan;143(1). pii: e20174183. doi: 10.1542/peds.2017-4183. Epub 2018 Dec 4.

PMID:
30514781
49.

Machine learning analysis of extreme events in optical fibre modulation instability.

Närhi M, Salmela L, Toivonen J, Billet C, Dudley JM, Genty G.

Nat Commun. 2018 Nov 22;9(1):4923. doi: 10.1038/s41467-018-07355-y.

50.

Correction: Integrative approach to sporadic Alzheimer's disease: deficiency of TYROBP in cerebral Aβ amyloidosis mouse normalizes clinical phenotype and complement subnetwork molecular pathology without reducing Aβ burden.

Haure-Mirande JV, Wang M, Audrain M, Fanutza T, Kim SH, Heja S, Readhead B, Dudley JT, Blitzer RD, Schadt EE, Zhang B, Gandy S, Ehrlich ME.

Mol Psychiatry. 2019 Mar;24(3):472. doi: 10.1038/s41380-018-0301-4.

PMID:
30464330

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