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Items: 1 to 50 of 596

1.

A cis-acting Element Downstream of the Mouse Mammary Tumor Virus Major Splice Donor Critical for RNA Elongation and Stability.

Akhlaq S, Philip PS, Ali LM, Dudley JP, Rizvi TA, Mustafa F.

J Mol Biol. 2018 Sep 1. pii: S0022-2836(18)30735-6. doi: 10.1016/j.jmb.2018.08.025. [Epub ahead of print]

2.

The Impact of Low-level Blast Exposure on Brain Function after a One-day Tactile Training and the Ameliorating Effect of a Jugular Vein Compression Neck Collar Device.

Yuan W, Barber-Foss K, Dudley J, Thomas S, Galloway RT, DiCesare C, Leach J, Scheifel P, Fariana M, Valencia G, Smith D, Altaye M, Rhra CK, Talavage TM, Myer GD.

J Neurotrauma. 2018 Aug 23. doi: 10.1089/neu.2018.5737. [Epub ahead of print]

PMID:
30136637
3.

MetaCyto: A Tool for Automated Meta-analysis of Mass and Flow Cytometry Data.

Hu Z, Jujjavarapu C, Hughey JJ, Andorf S, Lee HC, Gherardini PF, Spitzer MH, Thomas CG, Campbell J, Dunn P, Wiser J, Kidd BA, Dudley JT, Nolan GP, Bhattacharya S, Butte AJ.

Cell Rep. 2018 Jul 31;24(5):1377-1388. doi: 10.1016/j.celrep.2018.07.003.

4.

Does brain functional connectivity contribute to musculoskeletal injury? A preliminary prospective analysis of a neural biomarker of ACL injury risk.

Diekfuss JA, Grooms DR, Yuan W, Dudley J, Barber Foss KD, Thomas S, Ellis JD, Schneider DK, Leach J, Bonnette S, Myer GD.

J Sci Med Sport. 2018 Jul 10. pii: S1440-2440(18)30355-4. doi: 10.1016/j.jsams.2018.07.004. [Epub ahead of print]

PMID:
30017465
5.

Outpatient Opioid Prescriptions for Children and Opioid-Related Adverse Events.

Chung CP, Callahan ST, Cooper WO, Dupont WD, Murray KT, Franklin AD, Hall K, Dudley JA, Stein CM, Ray WA.

Pediatrics. 2018 Aug;142(2). pii: e20172156. doi: 10.1542/peds.2017-2156. Epub 2018 Jul 16.

PMID:
30012559
6.

Abutment screw loosening in angulation-correcting implants: An in vitro study.

Hotinski E, Dudley J.

J Prosthet Dent. 2018 Jul 10. pii: S0022-3913(18)30233-6. doi: 10.1016/j.prosdent.2018.03.005. [Epub ahead of print]

PMID:
30006224
7.

A jugular vein compression collar prevents alterations of endogenous electrocortical dynamics following blast exposure during special weapons and tactical (SWAT) breacher training.

Bonnette S, Diekfuss JA, Kiefer AW, Riley MA, Barber Foss KD, Thomas S, DiCesare CA, Yuan W, Dudley J, Reches A, Myer GD.

Exp Brain Res. 2018 Jul 10. doi: 10.1007/s00221-018-5328-x. [Epub ahead of print]

PMID:
29987537
8.

Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci.

Fullard JF, Giambartolomei C, Hauberg ME, Xu K, Voloudakis G, Shao Z, Bare C, Dudley JT, Mattheisen M, Robakis NK, Haroutunian V, Roussos P.

Hum Mol Genet. 2018 Jun 29. doi: 10.1093/hmg/ddy229. [Epub ahead of print] No abstract available.

PMID:
29982455
9.

The whole is greater than the sum of its parts: combining classical statistical and machine intelligence methods in medicine.

Shameer K, Johnson KW, Glicksberg BS, Dudley JT, Sengupta PP.

Heart. 2018 Jul;104(14):1228. doi: 10.1136/heartjnl-2018-313377. No abstract available.

PMID:
29945951
10.

Multiscale Analysis of Independent Alzheimer's Cohorts Finds Disruption of Molecular, Genetic, and Clinical Networks by Human Herpesvirus.

Readhead B, Haure-Mirande JV, Funk CC, Richards MA, Shannon P, Haroutunian V, Sano M, Liang WS, Beckmann ND, Price ND, Reiman EM, Schadt EE, Ehrlich ME, Gandy S, Dudley JT.

Neuron. 2018 Jul 11;99(1):64-82.e7. doi: 10.1016/j.neuron.2018.05.023. Epub 2018 Jun 21.

PMID:
29937276
11.
12.

A Network-Biology Informed Computational Drug Repositioning Strategy to Target Disease Risk Trajectories and Comorbidities of Peripheral Artery Disease.

Shameer K, Dow G, Glicksberg BS, Johnson KW, Ze Y, Tomlinson MS, Readhead B, Dudley JT, Kullo IJ.

AMIA Jt Summits Transl Sci Proc. 2018 May 18;2017:108-117. eCollection 2018.

13.

Artificial Intelligence in Cardiology.

Johnson KW, Torres Soto J, Glicksberg BS, Shameer K, Miotto R, Ali M, Ashley E, Dudley JT.

J Am Coll Cardiol. 2018 Jun 12;71(23):2668-2679. doi: 10.1016/j.jacc.2018.03.521. Review.

14.

The Rapid Prediction of Carbapenem Resistance in Patients With Klebsiella pneumoniae Bacteremia Using Electronic Medical Record Data.

Sullivan T, Ichikawa O, Dudley J, Li L, Aberg J.

Open Forum Infect Dis. 2018 Apr 28;5(5):ofy091. doi: 10.1093/ofid/ofy091. eCollection 2018 May.

15.

Adaptive Landscape of Protein Variation in Human Exomes.

Patel R, Scheinfeldt LB, Sanderford MD, Lanham TR, Tamura K, Platt A, Glicksberg BS, Xu K, Dudley JT, Kumar S.

Mol Biol Evol. 2018 Aug 1;35(8):2015-2025. doi: 10.1093/molbev/msy107.

16.

Disease Heritability Inferred from Familial Relationships Reported in Medical Records.

Polubriaginof FCG, Vanguri R, Quinnies K, Belbin GM, Yahi A, Salmasian H, Lorberbaum T, Nwankwo V, Li L, Shervey MM, Glowe P, Ionita-Laza I, Simmerling M, Hripcsak G, Bakken S, Goldstein D, Kiryluk K, Kenny EE, Dudley J, Vawdrey DK, Tatonetti NP.

Cell. 2018 Jun 14;173(7):1692-1704.e11. doi: 10.1016/j.cell.2018.04.032. Epub 2018 May 17.

PMID:
29779949
17.

Outpatient Pharmacotherapy for Neonatal Abstinence Syndrome.

Maalouf FI, Cooper WO, Slaughter JC, Dudley J, Patrick SW.

J Pediatr. 2018 Aug;199:151-157.e1. doi: 10.1016/j.jpeds.2018.03.048. Epub 2018 May 10.

PMID:
29754866
18.

Accuracy of Milled Titanium Frameworks Constructed with Direct Scanning and Splinted Impression Techniques.

Badwal AS, Dudley J.

Int J Prosthodont. 2018 May/Jun;31(3):236-238. doi: 10.11607/ijp.5493.

PMID:
29723317
19.

The next generation of precision medicine: observational studies, electronic health records, biobanks and continuous monitoring.

Glicksberg BS, Johnson KW, Dudley JT.

Hum Mol Genet. 2018 May 1;27(R1):R56-R62. doi: 10.1093/hmg/ddy114.

PMID:
29659828
20.

Rapamycin Modulates Glucocorticoid Receptor Function, Blocks Atrophogene REDD1, and Protects Skin from Steroid Atrophy.

Lesovaya E, Agarwal S, Readhead B, Vinokour E, Baida G, Bhalla P, Kirsanov K, Yakubovskaya M, Platanias LC, Dudley JT, Budunova I.

J Invest Dermatol. 2018 Sep;138(9):1935-1944. doi: 10.1016/j.jid.2018.02.045. Epub 2018 Mar 27.

21.

Isolation and Identification of the Follicular Microbiome: Implications for Acne Research.

Hall JB, Cong Z, Imamura-Kawasawa Y, Kidd BA, Dudley JT, Thiboutot DM, Nelson AM.

J Invest Dermatol. 2018 Sep;138(9):2033-2040. doi: 10.1016/j.jid.2018.02.038. Epub 2018 Mar 13.

PMID:
29548797
22.

Comparison of Coronal Tooth Reductions Resulting from Different Crown Preparations.

Dudley J.

Int J Prosthodont. 2018 Feb 15. doi: 10.11607/ijp.5569. [Epub ahead of print]

PMID:
29448263
23.

Twenty-year analysis of implant treatment in an Australian public dental clinic.

Duong A, Dudley J.

Aust Dent J. 2018 Jun;63(2):177-186. doi: 10.1111/adj.12598. Epub 2018 Mar 26.

PMID:
29396995
24.

Machine learning in cardiovascular medicine: are we there yet?

Shameer K, Johnson KW, Glicksberg BS, Dudley JT, Sengupta PP.

Heart. 2018 Jul;104(14):1156-1164. doi: 10.1136/heartjnl-2017-311198. Epub 2018 Jan 19. Review.

PMID:
29352006
25.

Impact of graft loss among kidney diseases with a high risk of post-transplant recurrence in the paediatric population.

Van Stralen KJ, Verrina E, Belingheri M, Dudley J, Dušek J, Grenda R, Macher MA, Puretic Z, Rubic J, Rudaitis S, Rudin C, Schaefer F, Jager KJ; ESPN/ERA-EDTA Registry.

Nephrol Dial Transplant. 2018 Mar 1;33(3):542. doi: 10.1093/ndt/gfx372. No abstract available.

PMID:
29340701
26.

Mild Jugular Compression Collar Ameliorated Changes in Brain Activation of Working Memory after One Soccer Season in Female High School Athletes.

Yuan W, Dudley J, Barber Foss KD, Ellis JD, Thomas S, Galloway RT, DiCesare CA, Leach JL, Adams J, Maloney T, Gadd B, Smith D, Epstein JN, Grooms DR, Logan K, Howell DR, Altaye M, Myer GD.

J Neurotrauma. 2018 Jun 1;35(11):1248-1259. doi: 10.1089/neu.2017.5262. Epub 2018 Mar 27.

PMID:
29334834
27.

Causal inference on electronic health records to assess blood pressure treatment targets: an application of the parametric g formula.

Johnson KW, Glicksberg BS, Hodos RA, Shameer K, Dudley JT.

Pac Symp Biocomput. 2018;23:180-191.

28.

Automated disease cohort selection using word embeddings from Electronic Health Records.

Glicksberg BS, Miotto R, Johnson KW, Shameer K, Li L, Chen R, Dudley JT.

Pac Symp Biocomput. 2018;23:145-156.

29.

Loss-of-function of neuroplasticity-related genes confers risk for human neurodevelopmental disorders.

Smith MR, Glicksberg BS, Li L, Chen R, Morishita H, Dudley JT.

Pac Symp Biocomput. 2018;23:68-79.

30.

Cell-specific prediction and application of drug-induced gene expression profiles.

Hodos R, Zhang P, Lee HC, Duan Q, Wang Z, Clark NR, Ma'ayan A, Wang F, Kidd B, Hu J, Sontag D, Dudley J.

Pac Symp Biocomput. 2018;23:32-43.

31.

Shared Reading Quality and Brain Activation during Story Listening in Preschool-Age Children.

Hutton JS, Phelan K, Horowitz-Kraus T, Dudley J, Altaye M, DeWitt T, Holland SK.

J Pediatr. 2017 Dec;191:204-211.e1. doi: 10.1016/j.jpeds.2017.08.037.

PMID:
29173308
32.

A Comparison of Marginal Gaps of All-Ceramic Crowns Constructed from Scanned Impressions and Models.

Tabesh R, Dudley J.

Int J Prosthodont. 2018 January/February;31(1):71–73. doi: 10.11607/ijp.5490. Epub 2017 Nov 22.

PMID:
29166420
33.

Antibacterial Assessment of Heteroaryl, Vinyl, Benzyl, and Alkyl Tetrazole Compounds.

Dudley J, Feinn L, DeFrancesco H, Lindsay E, Coca A, Roberts EL.

Med Chem. 2018;14(6):550-555. doi: 10.2174/1573406413666171120162420.

PMID:
29165091
34.

Regulatory T-cell Genes Drive Altered Immune Microenvironment in Adult Solid Cancers and Allow for Immune Contextual Patient Subtyping.

Brouwer-Visser J, Cheng WY, Bauer-Mehren A, Maisel D, Lechner K, Andersson E, Dudley JT, Milletti F.

Cancer Epidemiol Biomarkers Prev. 2018 Jan;27(1):103-112. doi: 10.1158/1055-9965.EPI-17-0461. Epub 2017 Nov 13.

PMID:
29133367
35.

Predicting age by mining electronic medical records with deep learning characterizes differences between chronological and physiological age.

Wang Z, Li L, Glicksberg BS, Israel A, Dudley JT, Ma'ayan A.

J Biomed Inform. 2017 Dec;76:59-68. doi: 10.1016/j.jbi.2017.11.003. Epub 2017 Nov 4.

PMID:
29113935
36.

MMTV does not encode viral microRNAs but alters the levels of cancer-associated host microRNAs.

Kincaid RP, Panicker NG, Lozano MM, Sullivan CS, Dudley JP, Mustafa F.

Virology. 2018 Jan 1;513:180-187. doi: 10.1016/j.virol.2017.09.030. Epub 2017 Nov 5.

37.

Single-shot ultrafast laser processing of high-aspect-ratio nanochannels using elliptical Bessel beams.

Meyer R, Jacquot M, Giust R, Safioui J, Rapp L, Furfaro L, Lacourt PA, Dudley JM, Courvoisier F.

Opt Lett. 2017 Nov 1;42(21):4307-4310. doi: 10.1364/OL.42.004307.

PMID:
29088150
38.

White matter alterations over the course of two consecutive high-school football seasons and the effect of a jugular compression collar: A preliminary longitudinal diffusion tensor imaging study.

Yuan W, Barber Foss KD, Thomas S, DiCesare CA, Dudley JA, Kitchen K, Gadd B, Leach JL, Smith D, Altaye M, Gubanich P, Galloway RT, McCrory P, Bailes JE, Mannix R, Meehan WP 3rd, Myer GD.

Hum Brain Mapp. 2018 Jan;39(1):491-508. doi: 10.1002/hbm.23859. Epub 2017 Oct 28.

PMID:
29080230
39.

Deactivated CRISPR Associated Protein 9 for Minor-Allele Enrichment in Cell-Free DNA.

Aalipour A, Dudley JC, Park SM, Murty S, Chabon JJ, Boyle EA, Diehn M, Gambhir SS.

Clin Chem. 2018 Feb;64(2):307-316. doi: 10.1373/clinchem.2017.278911. Epub 2017 Oct 16.

PMID:
29038154
40.

Uncovering exposures responsible for birth season - disease effects: a global study.

Boland MR, Parhi P, Li L, Miotto R, Carroll R, Iqbal U, Nguyen PA, Schuemie M, You SC, Smith D, Mooney S, Ryan P, Li YJ, Park RW, Denny J, Dudley JT, Hripcsak G, Gentine P, Tatonetti NP.

J Am Med Inform Assoc. 2017 Sep 28. doi: 10.1093/jamia/ocx105. [Epub ahead of print]

PMID:
29036387
41.

Institutional profile: translational pharmacogenomics at the Icahn School of Medicine at Mount Sinai.

Scott SA, Owusu Obeng A, Botton MR, Yang Y, Scott ER, Ellis SB, Wallsten R, Kaszemacher T, Zhou X, Chen R, Nicoletti P, Naik H, Kenny EE, Vega A, Waite E, Diaz GA, Dudley J, Halperin JL, Edelmann L, Kasarskis A, Hulot JS, Peter I, Bottinger EP, Hirschhorn K, Sklar P, Cho JH, Desnick RJ, Schadt EE.

Pharmacogenomics. 2017 Oct;18(15):1381-1386. doi: 10.2217/pgs-2017-0137. Epub 2017 Oct 6. Review.

PMID:
28982267
42.

Intensive vaginal dilation using adjuvant treatments in women with Mayer-Rokitansky-Kuster-Hauser syndrome: retrospective cohort study.

Ketheeswaran A, Morrisey J, Abbott J, Bennett M, Dudley J, Deans R.

Aust N Z J Obstet Gynaecol. 2018 Feb;58(1):108-113. doi: 10.1111/ajo.12715. Epub 2017 Sep 28.

PMID:
28960241
43.

Controlling nonlinear instabilities in Bessel beams through longitudinal intensity shaping.

Ouadghiri-Idrissi I, Dudley JM, Courvoisier F.

Opt Lett. 2017 Oct 1;42(19):3785-3788. doi: 10.1364/OL.42.003785.

PMID:
28957127
44.

Early Detection of Molecular Residual Disease in Localized Lung Cancer by Circulating Tumor DNA Profiling.

Chaudhuri AA, Chabon JJ, Lovejoy AF, Newman AM, Stehr H, Azad TD, Khodadoust MS, Esfahani MS, Liu CL, Zhou L, Scherer F, Kurtz DM, Say C, Carter JN, Merriott DJ, Dudley JC, Binkley MS, Modlin L, Padda SK, Gensheimer MF, West RB, Shrager JB, Neal JW, Wakelee HA, Loo BW Jr, Alizadeh AA, Diehn M.

Cancer Discov. 2017 Dec;7(12):1394-1403. doi: 10.1158/2159-8290.CD-17-0716. Epub 2017 Sep 24.

45.

Dysregulation of miRNA-9 in a Subset of Schizophrenia Patient-Derived Neural Progenitor Cells.

Topol A, Zhu S, Hartley BJ, English J, Hauberg ME, Tran N, Rittenhouse CA, Simone A, Ruderfer DM, Johnson J, Readhead B, Hadas Y, Gochman PA, Wang YC, Shah H, Cagney G, Rapoport J, Gage FH, Dudley JT, Sklar P, Mattheisen M, Cotter D, Fang G, Brennand KJ.

Cell Rep. 2017 Sep 5;20(10):2525. doi: 10.1016/j.celrep.2017.08.073. No abstract available.

46.

Prosthodontic management of maxillofacial cases: a case series.

Dudley J, Mughal F, Hotinski E, Mahmud M.

Aust Dent J. 2018 Mar;63(1):124-128. doi: 10.1111/adj.12563. Epub 2017 Oct 11.

PMID:
28853144
47.

Mindfulness of voices, self-compassion, and secure attachment in relation to the experience of hearing voices.

Dudley J, Eames C, Mulligan J, Fisher N.

Br J Clin Psychol. 2018 Mar;57(1):1-17. doi: 10.1111/bjc.12153. Epub 2017 Aug 12.

48.

Universality of the Peregrine Soliton in the Focusing Dynamics of the Cubic Nonlinear Schrödinger Equation.

Tikan A, Billet C, El G, Tovbis A, Bertola M, Sylvestre T, Gustave F, Randoux S, Genty G, Suret P, Dudley JM.

Phys Rev Lett. 2017 Jul 21;119(3):033901. doi: 10.1103/PhysRevLett.119.033901. Epub 2017 Jul 18.

PMID:
28777604
49.

Intracoronary Imaging, Cholesterol Efflux, and Transcriptomics after Intensive Statin Treatment in Diabetes.

Chamaria S, Johnson KW, Vengrenyuk Y, Baber U, Shameer K, Divaraniya AA, Glicksberg BS, Li L, Bhatheja S, Moreno P, Maehara A, Mehran R, Dudley JT, Narula J, Sharma SK, Kini AS.

Sci Rep. 2017 Aug 1;7(1):7001. doi: 10.1038/s41598-017-07029-7.

50.

Necroptosis activation in Alzheimer's disease.

Caccamo A, Branca C, Piras IS, Ferreira E, Huentelman MJ, Liang WS, Readhead B, Dudley JT, Spangenberg EE, Green KN, Belfiore R, Winslow W, Oddo S.

Nat Neurosci. 2017 Sep;20(9):1236-1246. doi: 10.1038/nn.4608. Epub 2017 Jul 24.

PMID:
28758999

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