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Items: 1 to 50 of 260

1.

CA2 neuronal activity controls hippocampal low gamma and ripple oscillations.

Alexander GM, Brown LY, Farris S, Lustberg D, Pantazis C, Gloss B, Plummer NW, Jensen P, Dudek SM.

Elife. 2018 Nov 2;7. pii: e38052. doi: 10.7554/eLife.38052.

2.

Preface.

Belvitch P, Dudek S.

Curr Top Membr. 2018;82:xi-xii. doi: 10.1016/S1063-5823(18)30049-8. No abstract available.

PMID:
30360785
3.

Cortical Actin Dynamics in Endothelial Permeability.

Belvitch P, Htwe YM, Brown ME, Dudek S.

Curr Top Membr. 2018;82:141-195. doi: 10.1016/bs.ctm.2018.09.003. Epub 2018 Oct 15.

PMID:
30360779
4.

Ube3a reinstatement mitigates epileptogenesis in Angelman syndrome model mice.

Gu B, Carstens KE, Judson MC, Dalton KA, Rougié M, Clark EP, Dudek SM, Philpot BD.

J Clin Invest. 2019 Jan 2;129(1):163-168. doi: 10.1172/JCI120816. Epub 2018 Nov 19.

5.

DPP4 inhibition by sitagliptin attenuates LPS-induced lung injury in mice.

Kawasaki T, Chen W, Htwe YM, Tatsumi K, Dudek SM.

Am J Physiol Lung Cell Mol Physiol. 2018 Nov 1;315(5):L834-L845. doi: 10.1152/ajplung.00031.2018. Epub 2018 Sep 6.

PMID:
30188745
6.

Regulation of synaptic plasticity in hippocampal area CA2.

Carstens KE, Dudek SM.

Curr Opin Neurobiol. 2019 Feb;54:194-199. doi: 10.1016/j.conb.2018.07.008. Epub 2018 Aug 14. Review.

PMID:
30120016
7.

Diversity of dendritic morphology and entorhinal cortex synaptic effectiveness in mouse CA2 pyramidal neurons.

Helton TD, Zhao M, Farris S, Dudek SM.

Hippocampus. 2019 Feb;29(2):78-92. doi: 10.1002/hipo.23012. Epub 2018 Nov 25.

PMID:
30067288
8.

The clinically approved MEK inhibitor Trametinib efficiently blocks influenza A virus propagation and cytokine expression.

Schräder T, Dudek SE, Schreiber A, Ehrhardt C, Planz O, Ludwig S.

Antiviral Res. 2018 Sep;157:80-92. doi: 10.1016/j.antiviral.2018.07.006. Epub 2018 Jul 7.

9.

RGS14 Restricts Plasticity in Hippocampal CA2 by Limiting Postsynaptic Calcium Signaling.

Evans PR, Parra-Bueno P, Smirnov MS, Lustberg DJ, Dudek SM, Hepler JR, Yasuda R.

eNeuro. 2018 Jun 4;5(3). pii: ENEURO.0353-17.2018. doi: 10.1523/ENEURO.0353-17.2018. eCollection 2018 May-Jun.

10.

Integration of genetic and functional genomics data to uncover chemotherapeutic induced cytotoxicity.

Li R, Kim D, Wheeler HE, Dudek SM, Dolan ME, Ritchie MD.

Pharmacogenomics J. 2018 May 25. doi: 10.1038/s41397-018-0024-6. [Epub ahead of print]

PMID:
29795408
11.

Collective feature selection to identify crucial epistatic variants.

Verma SS, Lucas A, Zhang X, Veturi Y, Dudek S, Li B, Li R, Urbanowicz R, Moore JH, Kim D, Ritchie MD.

BioData Min. 2018 Apr 19;11:5. doi: 10.1186/s13040-018-0168-6. eCollection 2018.

12.

Different Neuronal Activity Patterns Induce Different Gene Expression Programs.

Tyssowski KM, DeStefino NR, Cho JH, Dunn CJ, Poston RG, Carty CE, Jones RD, Chang SM, Romeo P, Wurzelmann MK, Ward JM, Andermann ML, Saha RN, Dudek SM, Gray JM.

Neuron. 2018 May 2;98(3):530-546.e11. doi: 10.1016/j.neuron.2018.04.001. Epub 2018 Apr 19.

PMID:
29681534
13.

A simulation study investigating power estimates in phenome-wide association studies.

Verma A, Bradford Y, Dudek S, Lucas AM, Verma SS, Pendergrass SA, Ritchie MD.

BMC Bioinformatics. 2018 Apr 4;19(1):120. doi: 10.1186/s12859-018-2135-0.

14.

Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca2+/CaM) and CaM Kinase II (CaMKII) Binding Partner.

Evans PR, Gerber KJ, Dammer EB, Duong DM, Goswami D, Lustberg DJ, Zou J, Yang JJ, Dudek SM, Griffin PR, Seyfried NT, Hepler JR.

J Proteome Res. 2018 Apr 6;17(4):1700-1711. doi: 10.1021/acs.jproteome.8b00027. Epub 2018 Mar 20.

PMID:
29518331
15.

Myosin light chain kinase ( MYLK) coding polymorphisms modulate human lung endothelial cell barrier responses via altered tyrosine phosphorylation, spatial localization, and lamellipodial protrusions.

Wang T, Brown ME, Kelly GT, Camp SM, Mascarenhas JB, Sun X, Dudek SM, Garcia JGN.

Pulm Circ. 2018 Apr-Jun;8(2):2045894018764171. doi: 10.1177/2045894018764171. Epub 2018 Feb 26.

16.

The Significant Role of c-Abl Kinase in Barrier Altering Agonists-mediated Cytoskeletal Biomechanics.

Wang X, Wang L, Garcia JGN, Dudek SM, Shekhawat GS, Dravid VP.

Sci Rep. 2018 Jan 17;8(1):1002. doi: 10.1038/s41598-018-19423-w.

17.

Hippocampus and Entorhinal Cortex Recruit Cholinergic and NMDA Receptors Separately to Generate Hippocampal Theta Oscillations.

Gu Z, Alexander GM, Dudek SM, Yakel JL.

Cell Rep. 2017 Dec 19;21(12):3585-3595. doi: 10.1016/j.celrep.2017.11.080.

18.

Pharmacodynamics, Pharmacokinetics, and Antiviral Activity of BAY 81-8781, a Novel NF-κB Inhibiting Anti-influenza Drug.

Droebner K, Haasbach E, Dudek SE, Scheuch G, Nocker K, Canisius S, Ehrhardt C, von Degenfeld G, Ludwig S, Planz O.

Front Microbiol. 2017 Nov 2;8:2130. doi: 10.3389/fmicb.2017.02130. eCollection 2017.

19.

PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies.

Hall MA, Wallace J, Lucas A, Kim D, Basile AO, Verma SS, McCarty CA, Brilliant MH, Peissig PL, Kitchner TE, Verma A, Pendergrass SA, Dudek SM, Moore JH, Ritchie MD.

Nat Commun. 2017 Oct 27;8(1):1167. doi: 10.1038/s41467-017-00802-2.

20.

Development of ultrasound bioprobe for biological imaging.

Shekhawat GS, Dudek SM, Dravid VP.

Sci Adv. 2017 Oct 25;3(10):e1701176. doi: 10.1126/sciadv.1701176. eCollection 2017 Oct.

21.

Imatinib Alters Agonists-mediated Cytoskeletal Biomechanics in Lung Endothelium.

Wang X, Bleher R, Wang L, Garcia JGN, Dudek SM, Shekhawat GS, Dravid VP.

Sci Rep. 2017 Oct 26;7(1):14152. doi: 10.1038/s41598-017-14722-0.

22.

Histone Hypervariants H2A.Z.1 and H2A.Z.2 Play Independent and Context-Specific Roles in Neuronal Activity-Induced Transcription of Arc/Arg3.1 and Other Immediate Early Genes.

Dunn CJ, Sarkar P, Bailey ER, Farris S, Zhao M, Ward JM, Dudek SM, Saha RN.

eNeuro. 2017 Aug 24;4(4). pii: ENEURO.0040-17.2017. doi: 10.1523/ENEURO.0040-17.2017. eCollection 2017 Jul-Aug.

23.

Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals.

Holzinger ER, Verma SS, Moore CB, Hall M, De R, Gilbert-Diamond D, Lanktree MB, Pankratz N, Amuzu A, Burt A, Dale C, Dudek S, Furlong CE, Gaunt TR, Kim DS, Riess H, Sivapalaratnam S, Tragante V, van Iperen EPA, Brautbar A, Carrell DS, Crosslin DR, Jarvik GP, Kuivaniemi H, Kullo IJ, Larson EB, Rasmussen-Torvik LJ, Tromp G, Baumert J, Cruickshanks KJ, Farrall M, Hingorani AD, Hovingh GK, Kleber ME, Klein BE, Klein R, Koenig W, Lange LA, Mӓrz W, North KE, Charlotte Onland-Moret N, Reiner AP, Talmud PJ, van der Schouw YT, Wilson JG, Kivimaki M, Kumari M, Moore JH, Drenos F, Asselbergs FW, Keating BJ, Ritchie MD.

BioData Min. 2017 Jul 24;10:25. doi: 10.1186/s13040-017-0145-5. eCollection 2017.

24.

The ARP 2/3 complex mediates endothelial barrier function and recovery.

Belvitch P, Brown ME, Brinley BN, Letsiou E, Rizzo AN, Garcia JGN, Dudek SM.

Pulm Circ. 2017 Feb 1;7(1):200-210. doi: 10.1086/690307. eCollection 2017 Mar.

25.

Optimized Method for Robust Transcriptome Profiling of Minute Tissues Using Laser Capture Microdissection and Low-Input RNA-Seq.

Farris S, Wang Y, Ward JM, Dudek SM.

Front Mol Neurosci. 2017 Jun 13;10:185. doi: 10.3389/fnmol.2017.00185. eCollection 2017.

26.

Endothelial Glycocalyx Repair: Building a Wall to Protect the Lung during Sepsis.

Rizzo AN, Dudek SM.

Am J Respir Cell Mol Biol. 2017 Jun;56(6):687-688. doi: 10.1165/rcmb.2017-0065ED. No abstract available.

27.

GIRK2 splice variants and neuronal G protein-gated K+ channels: implications for channel function and behavior.

Marron Fernandez de Velasco E, Zhang L, N Vo B, Tipps M, Farris S, Xia Z, Anderson A, Carlblom N, Weaver CD, Dudek SM, Wickman K.

Sci Rep. 2017 May 9;7(1):1639. doi: 10.1038/s41598-017-01820-2.

28.

Induction of Apoptosis in Normal Human Dermal Fibroblasts Infected with Borrelia burgdorferi Sensu Lato.

Rozwadowska B, Albertyńska M, Okła H, Jasik KP, Swinarew AS, Mazurek U, Dudek S, Urbańska-Jasik D, Poprawa I.

Vector Borne Zoonotic Dis. 2017 Apr;17(4):237-242. doi: 10.1089/vbz.2016.2057. Epub 2017 Jan 9.

PMID:
28068192
29.

Using knowledge-driven genomic interactions for multi-omics data analysis: metadimensional models for predicting clinical outcomes in ovarian carcinoma.

Kim D, Li R, Lucas A, Verma SS, Dudek SM, Ritchie MD.

J Am Med Inform Assoc. 2017 May 1;24(3):577-587. doi: 10.1093/jamia/ocw165.

30.

Cortactin in Atherosclerosis: Just Say NO.

Belvitch P, Rizzo AN, Dudek SM.

Arterioscler Thromb Vasc Biol. 2016 Dec;36(12):2278-2280. No abstract available.

31.

Long-term depression-associated signaling is required for an in vitro model of NMDA receptor-dependent synapse pruning.

Henson MA, Tucker CJ, Zhao M, Dudek SM.

Neurobiol Learn Mem. 2017 Feb;138:39-53. doi: 10.1016/j.nlm.2016.10.013. Epub 2016 Oct 26.

32.

Parkin regulates lipopolysaccharide-induced proinflammatory responses in acute lung injury.

Letsiou E, Sammani S, Wang H, Belvitch P, Dudek SM.

Transl Res. 2017 Mar;181:71-82. doi: 10.1016/j.trsl.2016.09.002. Epub 2016 Sep 13.

PMID:
27693468
33.

Expression Profiles of Toll-Like Receptors in the Differentiation of an Infection with Borrelia burgdorferi Sensu Lato Spirochetes.

Dudek S, Ziółko E, Kimsa-Dudek M, Solarz K, Mazurek U, Wierzgoń A, Kokot T, Muc-Wierzgoń M.

Arch Immunol Ther Exp (Warsz). 2017 Apr;65(2):175-182. doi: 10.1007/s00005-016-0416-8. Epub 2016 Sep 7.

PMID:
27604757
34.

Differential elastic responses to barrier-altering agonists in two types of human lung endothelium.

Viswanathan P, Ephstein Y, Garcia JG, Cho M, Dudek SM.

Biochem Biophys Res Commun. 2016 Sep 16;478(2):599-605. doi: 10.1016/j.bbrc.2016.07.112. Epub 2016 Jul 27.

35.

Regulation of Thrombin-Induced Lung Endothelial Cell Barrier Disruption by Protein Kinase C Delta.

Xie L, Chiang ET, Wu X, Kelly GT, Kanteti P, Singleton PA, Camp SM, Zhou T, Dudek SM, Natarajan V, Wang T, Black SM, Garcia JG, Jacobson JR.

PLoS One. 2016 Jul 21;11(7):e0158865. doi: 10.1371/journal.pone.0158865. eCollection 2016.

36.

Perineuronal Nets Suppress Plasticity of Excitatory Synapses on CA2 Pyramidal Neurons.

Carstens KE, Phillips ML, Pozzo-Miller L, Weinberg RJ, Dudek SM.

J Neurosci. 2016 Jun 8;36(23):6312-20. doi: 10.1523/JNEUROSCI.0245-16.2016.

37.

Influenza A viruses suppress cyclooxygenase-2 expression by affecting its mRNA stability.

Dudek SE, Nitzsche K, Ludwig S, Ehrhardt C.

Sci Rep. 2016 Jun 6;6:27275. doi: 10.1038/srep27275.

38.

Recombinase-Dependent Mouse Lines for Chemogenetic Activation of Genetically Defined Cell Types.

Sciolino NR, Plummer NW, Chen YW, Alexander GM, Robertson SD, Dudek SM, McElligott ZA, Jensen P.

Cell Rep. 2016 Jun 14;15(11):2563-73. doi: 10.1016/j.celrep.2016.05.034. Epub 2016 Jun 2.

39.

Nonmuscle myosin light chain kinase activity modulates radiation-induced lung injury.

Wang T, Mathew B, Wu X, Shimizu Y, Rizzo AN, Dudek SM, Weichselbaum RR, Jacobson JR, Hecker L, Garcia JG.

Pulm Circ. 2016 Jun;6(2):234-9. doi: 10.1086/686491.

40.

Identification of genetic interaction networks via an evolutionary algorithm evolved Bayesian network.

Li R, Dudek SM, Kim D, Hall MA, Bradford Y, Peissig PL, Brilliant MH, Linneman JG, McCarty CA, Bao L, Ritchie MD.

BioData Min. 2016 May 10;9:18. doi: 10.1186/s13040-016-0094-4. eCollection 2016.

41.

Pathway analysis by randomization incorporating structure-PARIS: an update.

Butkiewicz M, Cooke Bailey JN, Frase A, Dudek S, Yaspan BL, Ritchie MD, Pendergrass SA, Haines JL.

Bioinformatics. 2016 Aug 1;32(15):2361-3. doi: 10.1093/bioinformatics/btw130. Epub 2016 Mar 7.

42.

Discovery of gene-gene interactions across multiple independent data sets of late onset Alzheimer disease from the Alzheimer Disease Genetics Consortium.

Hohman TJ, Bush WS, Jiang L, Brown-Gentry KD, Torstenson ES, Dudek SM, Mukherjee S, Naj A, Kunkle BW, Ritchie MD, Martin ER, Schellenberg GD, Mayeux R, Farrer LA, Pericak-Vance MA, Haines JL, Thornton-Wells TA; Alzheimer's Disease Genetics Consortium.

Neurobiol Aging. 2016 Feb;38:141-150. doi: 10.1016/j.neurobiolaging.2015.10.031. Epub 2015 Nov 6.

43.

Rediscovering area CA2: unique properties and functions.

Dudek SM, Alexander GM, Farris S.

Nat Rev Neurosci. 2016 Feb;17(2):89-102. doi: 10.1038/nrn.2015.22. Review.

44.

Social and novel contexts modify hippocampal CA2 representations of space.

Alexander GM, Farris S, Pirone JR, Zheng C, Colgin LL, Dudek SM.

Nat Commun. 2016 Jan 25;7:10300. doi: 10.1038/ncomms10300.

45.

Cytotoxic effects of natural and semisynthetic cucurbitacins on lung cancer cell line A549.

Silva IT, Geller FC, Persich L, Dudek SE, Lang KL, Caro MS, Durán FJ, Schenkel EP, Ludwig S, Simões CM.

Invest New Drugs. 2016 Apr;34(2):139-48. doi: 10.1007/s10637-015-0317-4. Epub 2016 Jan 16.

PMID:
26780083
46.

INTEGRATING CLINICAL LABORATORY MEASURES AND ICD-9 CODE DIAGNOSES IN PHENOME-WIDE ASSOCIATION STUDIES.

Verma A, Leader JB, Verma SS, Frase A, Wallace J, Dudek S, Lavage DR, Van Hout CV, Dewey FE, Penn J, Lopez A, Overton JD, Carey DJ, Ledbetter DH, Kirchner HL, Ritchie MD, Pendergrass SA.

Pac Symp Biocomput. 2016;21:168-79.

47.

BIOCHANIN A SHOWS NO EFFECT ON SKELETAL SYSTEM IN OVARIECTOMIZED RATS, WHEN ADMINISTERED IN MODERATE DOSE.

Kaczmarczyk-Sedlak I, Zych M, Wojnar W, Ozimina-Kamińska E, Dudek S, Chadała N, Kachel A.

Acta Pol Pharm. 2015 May-Jun;72(3):587-96.

48.

"Pulmonary Endothelial Cell Barrier Enhancement by Novel FTY720 Analogs: Methoxy-FTY720, Fluoro-FTY720, and β-Glucuronide-FTY720".

Camp SM, Chiang ET, Sun C, Usatyuk PV, Bittman R, Natarajan V, Garcia JG, Dudek SM.

Chem Phys Lipids. 2016 Jan;194:85-93. doi: 10.1016/j.chemphyslip.2015.10.004. Epub 2015 Oct 29.

PMID:
26496151
49.

ATP promotes cell survival via regulation of cytosolic [Ca2+] and Bcl-2/Bax ratio in lung cancer cells.

Song S, Jacobson KN, McDermott KM, Reddy SP, Cress AE, Tang H, Dudek SM, Black SM, Garcia JG, Makino A, Yuan JX.

Am J Physiol Cell Physiol. 2016 Jan 15;310(2):C99-114. doi: 10.1152/ajpcell.00092.2015. Epub 2015 Oct 21.

50.

Decreased pulmonary function in asymptomatic long-term survivors after allogeneic hematopoietic stem cell transplant.

Oh AL, Patel P, Sweiss K, Chowdhery R, Dudek S, Rondelli D.

Bone Marrow Transplant. 2016 Feb;51(2):283-5. doi: 10.1038/bmt.2015.216. Epub 2015 Oct 5. No abstract available.

PMID:
26437068

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