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Alteromonas fortis sp. nov., a non-flagellated bacterium specialized in the degradation of iota-carrageenan, and emended description of the genus Alteromonas.

Barbeyron T, Zonta E, Le Panse S, Duchaud E, Michel G.

Int J Syst Evol Microbiol. 2019 Aug;69(8):2514-2521. doi: 10.1099/ijsem.0.003533. Epub 2019 Jun 14.


Correction to: Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions.

Fraslin C, Dechamp N, Bernard M, Krieg F, Hervet C, Guyomard R, Esquerré D, Barbieri J, Kuchly C, Duchaud E, Boudinot P, Rochat T, Bernardet JF, Quillet E.

Genet Sel Evol. 2019 Mar 20;51(1):11. doi: 10.1186/s12711-019-0451-0.


Identification of a Novel Elastin-Degrading Enzyme from the Fish Pathogen Flavobacterium psychrophilum.

Rochat T, Pérez-Pascual D, Nilsen H, Carpentier M, Bridel S, Bernardet JF, Duchaud E.

Appl Environ Microbiol. 2019 Mar 6;85(6). pii: e02535-18. doi: 10.1128/AEM.02535-18. Print 2019 Mar 15.


Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9T to Adapt to Macroalgal Niches.

Gobet A, Barbeyron T, Matard-Mann M, Magdelenat G, Vallenet D, Duchaud E, Michel G.

Front Microbiol. 2018 Nov 22;9:2740. doi: 10.3389/fmicb.2018.02740. eCollection 2018.


Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions.

Fraslin C, Dechamp N, Bernard M, Krieg F, Hervet C, Guyomard R, Esquerré D, Barbieri J, Kuchly C, Duchaud E, Boudinot P, Rochat T, Bernardet JF, Quillet E.

Genet Sel Evol. 2018 Nov 16;50(1):60. doi: 10.1186/s12711-018-0431-9. Erratum in: Genet Sel Evol. 2019 Mar 20;51(1):11.


Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum.

Duchaud E, Rochat T, Habib C, Barbier P, Loux V, Guérin C, Dalsgaard I, Madsen L, Nilsen H, Sundell K, Wiklund T, Strepparava N, Wahli T, Caburlotto G, Manfrin A, Wiens GD, Fujiwara-Nagata E, Avendaño-Herrera R, Bernardet JF, Nicolas P.

Front Microbiol. 2018 Feb 7;9:138. doi: 10.3389/fmicb.2018.00138. eCollection 2018.


Comparative Genomics of Tenacibaculum dicentrarchi and "Tenacibaculum finnmarkense" Highlights Intricate Evolution of Fish-Pathogenic Species.

Bridel S, Olsen AB, Nilsen H, Bernardet JF, Achaz G, Avendaño-Herrera R, Duchaud E.

Genome Biol Evol. 2018 Feb 1;10(2):452-457. doi: 10.1093/gbe/evy020.


More Than Gliding: Involvement of GldD and GldG in the Virulence of Flavobacterium psychrophilum.

Pérez-Pascual D, Rochat T, Kerouault B, Gómez E, Neulat-Ripoll F, Henry C, Quillet E, Guijarro JA, Bernardet JF, Duchaud E.

Front Microbiol. 2017 Nov 7;8:2168. doi: 10.3389/fmicb.2017.02168. eCollection 2017.


Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.

Ficko-Blean E, Préchoux A, Thomas F, Rochat T, Larocque R, Zhu Y, Stam M, Génicot S, Jam M, Calteau A, Viart B, Ropartz D, Pérez-Pascual D, Correc G, Matard-Mann M, Stubbs KA, Rogniaux H, Jeudy A, Barbeyron T, Médigue C, Czjzek M, Vallenet D, McBride MJ, Duchaud E, Michel G.

Nat Commun. 2017 Nov 22;8(1):1685. doi: 10.1038/s41467-017-01832-6.


Genomic Characterization of Flavobacterium psychrophilum Serotypes and Development of a Multiplex PCR-Based Serotyping Scheme.

Rochat T, Fujiwara-Nagata E, Calvez S, Dalsgaard I, Madsen L, Calteau A, Lunazzi A, Nicolas P, Wiklund T, Bernardet JF, Duchaud E.

Front Microbiol. 2017 Sep 12;8:1752. doi: 10.3389/fmicb.2017.01752. eCollection 2017.


Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139.

Chapelais-Baron M, Goubet I, Duchaud E, Rosenfeld E.

Genome Announc. 2017 Sep 7;5(36). pii: e00811-17. doi: 10.1128/genomeA.00811-17.


The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms.

Pérez-Pascual D, Lunazzi A, Magdelenat G, Rouy Z, Roulet A, Lopez-Roques C, Larocque R, Barbeyron T, Gobet A, Michel G, Bernardet JF, Duchaud E.

Front Microbiol. 2017 Aug 16;8:1542. doi: 10.3389/fmicb.2017.01542. eCollection 2017.


Multilocus sequence analysis reveals extensive genetic variety within Tenacibaculum spp. associated with ulcers in sea-farmed fish in Norway.

Olsen AB, Gulla S, Steinum T, Colquhoun DJ, Nilsen HK, Duchaud E.

Vet Microbiol. 2017 Jun;205:39-45. doi: 10.1016/j.vetmic.2017.04.028. Epub 2017 May 1.


Complete Genome Sequence of Flavobacteriumpsychrophilum Strain OSU THCO2-90, Used for Functional Genetic Analysis.

Rochat T, Barbier P, Nicolas P, Loux V, Pérez-Pascual D, Guijarro JA, Bernardet JF, Duchaud E.

Genome Announc. 2017 Feb 23;5(8). pii: e01665-16. doi: 10.1128/genomeA.01665-16.


Isolation, Characterization and Virulence Potential of Tenacibaculum dicentrarchi in Salmonid Cultures in Chile.

Avendaño-Herrera R, Irgang R, Sandoval C, Moreno-Lira P, Houel A, Duchaud E, Poblete-Morales M, Nicolas P, Ilardi P.

Transbound Emerg Dis. 2016 Apr;63(2):121-6. doi: 10.1111/tbed.12464. Epub 2016 Jan 8.


Development of a markerless deletion system for the fish-pathogenic bacterium Flavobacterium psychrophilum.

Gómez E, Álvarez B, Duchaud E, Guijarro JA.

PLoS One. 2015 Feb 18;10(2):e0117969. doi: 10.1371/journal.pone.0117969. eCollection 2015.


Multilocus sequence analysis of the marine bacterial genus Tenacibaculum suggests parallel evolution of fish pathogenicity and endemic colonization of aquaculture systems.

Habib C, Houel A, Lunazzi A, Bernardet JF, Olsen AB, Nilsen H, Toranzo AE, Castro N, Nicolas P, Duchaud E.

Appl Environ Microbiol. 2014 Sep;80(17):5503-14. doi: 10.1128/AEM.01177-14. Epub 2014 Jun 27.


Introduction, expansion and coexistence of epidemic Flavobacterium psychrophilum lineages in Chilean fish farms.

Avendaño-Herrera R, Houel A, Irgang R, Bernardet JF, Godoy M, Nicolas P, Duchaud E.

Vet Microbiol. 2014 Jun 4;170(3-4):298-306. doi: 10.1016/j.vetmic.2014.02.009. Epub 2014 Feb 16.


Multilocus sequence typing identifies epidemic clones of Flavobacterium psychrophilum in Nordic countries.

Nilsen H, Sundell K, Duchaud E, Nicolas P, Dalsgaard I, Madsen L, Aspán A, Jansson E, Colquhoun DJ, Wiklund T.

Appl Environ Microbiol. 2014 May;80(9):2728-36. doi: 10.1128/AEM.04233-13. Epub 2014 Feb 21.


From the Flavobacterium genus to the phylum Bacteroidetes: genomic analysis of dnd gene clusters.

Barbier P, Lunazzi A, Fujiwara-Nagata E, Avendaño-Herrera R, Bernardet JF, Touchon M, Duchaud E.

FEMS Microbiol Lett. 2013 Nov;348(1):26-35. doi: 10.1111/1574-6968.12239. Epub 2013 Sep 6.


Population structure of the fish pathogen Flavobacterium psychrophilum at whole-country and model river levels in Japan.

Fujiwara-Nagata E, Chantry-Darmon C, Bernardet JF, Eguchi M, Duchaud E, Nicolas P.

Vet Res. 2013 May 17;44:34. doi: 10.1186/1297-9716-44-34.


Genetic diversity of Flavobacterium psychrophilum isolated from rainbow trout in France: predominance of a clonal complex.

Siekoula-Nguedia C, Blanc G, Duchaud E, Calvez S.

Vet Microbiol. 2012 Dec 28;161(1-2):169-78. doi: 10.1016/j.vetmic.2012.07.022. Epub 2012 Jul 20.


Transcriptional responses of resistant and susceptible fish clones to the bacterial pathogen Flavobacterium psychrophilum.

Langevin C, Blanco M, Martin SA, Jouneau L, Bernardet JF, Houel A, Lunazzi A, Duchaud E, Michel C, Quillet E, Boudinot P.

PLoS One. 2012;7(6):e39126. doi: 10.1371/journal.pone.0039126. Epub 2012 Jun 13.


Complete genome sequence of Flavobacterium indicum GPSTA100-9T, isolated from warm spring water.

Barbier P, Houel A, Loux V, Poulain J, Bernardet JF, Touchon M, Duchaud E.

J Bacteriol. 2012 Jun;194(11):3024-5. doi: 10.1128/JB.00420-12.


Complete genome sequence of the fish pathogen Flavobacterium branchiophilum.

Touchon M, Barbier P, Bernardet JF, Loux V, Vacherie B, Barbe V, Rocha EP, Duchaud E.

Appl Environ Microbiol. 2011 Nov;77(21):7656-62. doi: 10.1128/AEM.05625-11. Epub 2011 Sep 16.


Comparative analysis and mutation effects of fpp2-fpp1 tandem genes encoding proteolytic extracellular enzymes of Flavobacterium psychrophilum.

Pérez-Pascual D, Gómez E, Álvarez B, Méndez J, Reimundo P, Navais R, Duchaud E, Guijarro JA.

Microbiology. 2011 Apr;157(Pt 4):1196-204. doi: 10.1099/mic.0.046938-0. Epub 2011 Feb 3.


Analysis of the Flavobacterium psychrophilum outer-membrane subproteome and identification of new antigenic targets for vaccine by immunomics.

Dumetz F, Duchaud E, Claverol S, Orieux N, Papillon S, Lapaillerie D, Le Hénaff M.

Microbiology. 2008 Jun;154(Pt 6):1793-801. doi: 10.1099/mic.0.2008/016600-0.


Population structure of the fish-pathogenic bacterium Flavobacterium psychrophilum.

Nicolas P, Mondot S, Achaz G, Bouchenot C, Bernardet JF, Duchaud E.

Appl Environ Microbiol. 2008 Jun;74(12):3702-9. doi: 10.1128/AEM.00244-08. Epub 2008 Apr 18.


Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia.

Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M.

Biochem J. 2008 Apr 15;411(2):307-18. doi: 10.1042/bj20071276.


The Flavobacterium psychrophilum OmpA, an outer membrane glycoprotein, induces a humoral response in rainbow trout.

Dumetz F, Lapatra SE, Duchaud E, Claverol S, Le Hénaff M.

J Appl Microbiol. 2007 Nov;103(5):1461-70.


Complete genome sequence of the fish pathogen Flavobacterium psychrophilum.

Duchaud E, Boussaha M, Loux V, Bernardet JF, Michel C, Kerouault B, Mondot S, Nicolas P, Bossy R, Caron C, Bessières P, Gibrat JF, Claverol S, Dumetz F, Le Hénaff M, Benmansour A.

Nat Biotechnol. 2007 Jul;25(7):763-9. Epub 2007 Jun 24.


A protective immune response is generated in rainbow trout by an OmpH-like surface antigen (P18) of Flavobacterium psychrophilum.

Dumetz F, Duchaud E, LaPatra SE, Le Marrec C, Claverol S, Urdaci MC, Le Hénaff M.

Appl Environ Microbiol. 2006 Jul;72(7):4845-52.


Whole-genome comparison between Photorhabdus strains to identify genomic regions involved in the specificity of nematode interaction.

Gaudriault S, Duchaud E, Lanois A, Canoy AS, Bourot S, Derose R, Kunst F, Boemare N, Givaudan A.

J Bacteriol. 2006 Jan;188(2):809-14.


Site-specific antiphagocytic function of the Photorhabdus luminescens type III secretion system during insect colonization.

Brugirard-Ricaud K, Duchaud E, Givaudan A, Girard PA, Kunst F, Boemare N, Brehélin M, Zumbihl R.

Cell Microbiol. 2005 Mar;7(3):363-71.


Variation in the effectors of the type III secretion system among Photorhabdus species as revealed by genomic analysis.

Brugirard-Ricaud K, Givaudan A, Parkhill J, Boemare N, Kunst F, Zumbihl R, Duchaud E.

J Bacteriol. 2004 Jul;186(13):4376-81.


AstR-AstS, a new two-component signal transduction system, mediates swarming, adaptation to stationary phase and phenotypic variation in Photorhabdus luminescens.

Derzelle S, Ngo S, Turlin E, Duchaud E, Namane A, Kunst F, Danchin A, Bertin P, Charles JF.

Microbiology. 2004 Apr;150(Pt 4):897-910.


Identification of a P2-related prophage remnant locus of Photorhabdus luminescens encoding an R-type phage tail-like particle.

Gaudriault S, Thaler JO, Duchaud E, Kunst F, Boemare N, Givaudan A.

FEMS Microbiol Lett. 2004 Apr 15;233(2):223-31.


The PhoP-PhoQ two-component regulatory system of Photorhabdus luminescens is essential for virulence in insects.

Derzelle S, Turlin E, Duchaud E, Pages S, Kunst F, Givaudan A, Danchin A.

J Bacteriol. 2004 Mar;186(5):1270-9.


CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects.

Frangeul L, Glaser P, Rusniok C, Buchrieser C, Duchaud E, Dehoux P, Kunst F.

Bioinformatics. 2004 Mar 22;20(5):790-7. Epub 2004 Jan 29.


In vivo expression of the mannose-resistant fimbriae of Photorhabdus temperata K122 during insect infection.

Meslet-Cladiere LM, Pimenta A, Duchaud E, Holland IB, Blight MA.

J Bacteriol. 2004 Feb;186(3):611-22.


The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.

Duchaud E, Rusniok C, Frangeul L, Buchrieser C, Givaudan A, Taourit S, Bocs S, Boursaux-Eude C, Chandler M, Charles JF, Dassa E, Derose R, Derzelle S, Freyssinet G, Gaudriault S, Médigue C, Lanois A, Powell K, Siguier P, Vincent R, Wingate V, Zouine M, Glaser P, Boemare N, Danchin A, Kunst F.

Nat Biotechnol. 2003 Nov;21(11):1307-13. Epub 2003 Oct 5.


Identification, characterization, and regulation of a cluster of genes involved in carbapenem biosynthesis in Photorhabdus luminescens.

Derzelle S, Duchaud E, Kunst F, Danchin A, Bertin P.

Appl Environ Microbiol. 2002 Aug;68(8):3780-9.


Comparative genomics of Listeria species.

Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P, Chakraborty T, Charbit A, Chetouani F, Couvé E, de Daruvar A, Dehoux P, Domann E, Domínguez-Bernal G, Duchaud E, Durant L, Dussurget O, Entian KD, Fsihi H, García-del Portillo F, Garrido P, Gautier L, Goebel W, Gómez-López N, Hain T, Hauf J, Jackson D, Jones LM, Kaerst U, Kreft J, Kuhn M, Kunst F, Kurapkat G, Madueno E, Maitournam A, Vicente JM, Ng E, Nedjari H, Nordsiek G, Novella S, de Pablos B, Pérez-Diaz JC, Purcell R, Remmel B, Rose M, Schlueter T, Simoes N, Tierrez A, Vázquez-Boland JA, Voss H, Wehland J, Cossart P.

Science. 2001 Oct 26;294(5543):849-52.


Infection with GB virus C/hepatitis G virus among blood donors and hemophiliacs in Martinique, a Caribbean island.

Césaire R, Martial J, Maier H, Kerob-Bauchet B, Bera O, Duchaud E, Brebion A, Pierre-Louis S.

J Med Virol. 1999 Oct;59(2):160-3.


Deregulated apoptosis is a hallmark of the Fanconi anemia syndrome.

Ridet A, Guillouf C, Duchaud E, Cundari E, Fiore M, Moustacchi E, Rosselli F.

Cancer Res. 1997 May 1;57(9):1722-30.


Deregulated apoptosis in ataxia telangiectasia: association with clinical stigmata and radiosensitivity.

Duchaud E, Ridet A, Stoppa-Lyonnet D, Janin N, Moustacchi E, Rosselli F.

Cancer Res. 1996 Mar 15;56(6):1400-4.


Isolation of an ubiquitously expressed cDNA encoding human dynamin II, a member of the large GTP-binding protein family.

Diatloff-Zito C, Gordon AJ, Duchaud E, Merlin G.

Gene. 1995 Oct 3;163(2):301-6.


p53-dependent pathway of radio-induced apoptosis is altered in Fanconi anemia.

Rosselli F, Ridet A, Soussi T, Duchaud E, Alapetite C, Moustacchi E.

Oncogene. 1995 Jan 5;10(1):9-17.


Comparison of the effects of DNA topoisomerase inhibitors on lymphoblasts from normal and Fanconi anemia donors.

Rosselli F, Duchaud E, Averbeck D, Moustacchi E.

Mutat Res. 1994 Dec;325(4):137-44.


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