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Items: 1 to 50 of 58

1.

Metaorganisms in extreme environments: do microbes play a role in organismal adaptation?

Bang C, Dagan T, Deines P, Dubilier N, Duschl WJ, Fraune S, Hentschel U, Hirt H, Hülter N, Lachnit T, Picazo D, Pita L, Pogoreutz C, Rädecker N, Saad MM, Schmitz RA, Schulenburg H, Voolstra CR, Weiland-Bräuer N, Ziegler M, Bosch TCG.

Zoology (Jena). 2018 Apr;127:1-19. doi: 10.1016/j.zool.2018.02.004. Epub 2018 Feb 15. Review.

PMID:
29599012
2.

Acquisition of a Novel Sulfur-Oxidizing Symbiont in the Gutless Marine Worm Inanidrilus exumae.

Bergin C, Wentrup C, Brewig N, Blazejak A, Erséus C, Giere O, Schmid M, De Wit P, Dubilier N.

Appl Environ Microbiol. 2018 Mar 19;84(7). pii: e02267-17. doi: 10.1128/AEM.02267-17. Print 2018 Apr 1.

3.

Specificity in diversity: single origin of a widespread ciliate-bacteria symbiosis.

Seah BKB, Schwaha T, Volland JM, Huettel B, Dubilier N, Gruber-Vodicka HR.

Proc Biol Sci. 2017 Jul 12;284(1858). pii: 20170764. doi: 10.1098/rspb.2017.0764.

4.

Short-chain alkanes fuel mussel and sponge Cycloclasticus symbionts from deep-sea gas and oil seeps.

Rubin-Blum M, Antony CP, Borowski C, Sayavedra L, Pape T, Sahling H, Bohrmann G, Kleiner M, Redmond MC, Valentine DL, Dubilier N.

Nat Microbiol. 2017 Jun 19;2:17093. doi: 10.1038/nmicrobiol.2017.93.

5.

Transcriptomic and proteomic insights into innate immunity and adaptations to a symbiotic lifestyle in the gutless marine worm Olavius algarvensis.

Wippler J, Kleiner M, Lott C, Gruhl A, Abraham PE, Giannone RJ, Young JC, Hettich RL, Dubilier N.

BMC Genomics. 2016 Nov 21;17(1):942.

6.

Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis.

Ponnudurai R, Kleiner M, Sayavedra L, Petersen JM, Moche M, Otto A, Becher D, Takeuchi T, Satoh N, Dubilier N, Schweder T, Markert S.

ISME J. 2017 Feb;11(2):463-477. doi: 10.1038/ismej.2016.124. Epub 2016 Nov 1.

7.

Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti.

Tavormina PL, Kellermann MY, Antony CP, Tocheva EI, Dalleska NF, Jensen AJ, Valentine DL, Hinrichs KU, Jensen GJ, Dubilier N, Orphan VJ.

Mol Microbiol. 2017 Jan;103(2):242-252. doi: 10.1111/mmi.13553. Epub 2016 Nov 22.

8.

Biophysical and Population Genetic Models Predict the Presence of "Phantom" Stepping Stones Connecting Mid-Atlantic Ridge Vent Ecosystems.

Breusing C, Biastoch A, Drews A, Metaxas A, Jollivet D, Vrijenhoek RC, Bayer T, Melzner F, Sayavedra L, Petersen JM, Dubilier N, Schilhabel MB, Rosenstiel P, Reusch TB.

Curr Biol. 2016 Sep 12;26(17):2257-67. doi: 10.1016/j.cub.2016.06.062. Epub 2016 Jul 28.

9.

A specific and widespread association between deep-sea Bathymodiolus mussels and a novel family of Epsilonproteobacteria.

Assié A, Borowski C, van der Heijden K, Raggi L, Geier B, Leisch N, Schimak MP, Dubilier N, Petersen JM.

Environ Microbiol Rep. 2016 Jul 18. doi: 10.1111/1758-2229.12442. [Epub ahead of print]

PMID:
27428292
10.

Closely coupled evolutionary history of ecto- and endosymbionts from two distantly related animal phyla.

Zimmermann J, Wentrup C, Sadowski M, Blazejak A, Gruber-Vodicka HR, Kleiner M, Ott JA, Cronholm B, De Wit P, Erséus C, Dubilier N.

Mol Ecol. 2016 Jul;25(13):3203-23. doi: 10.1111/mec.13554. Epub 2016 Mar 15.

PMID:
26826340
11.

Microbiology: Create a global microbiome effort.

Dubilier N, McFall-Ngai M, Zhao L.

Nature. 2015 Oct 29;526(7575):631-4. doi: 10.1038/526631a. No abstract available.

PMID:
26511562
12.

MiL-FISH: Multilabeled Oligonucleotides for Fluorescence In Situ Hybridization Improve Visualization of Bacterial Cells.

Schimak MP, Kleiner M, Wetzel S, Liebeke M, Dubilier N, Fuchs BM.

Appl Environ Microbiol. 2015 Oct 16;82(1):62-70. doi: 10.1128/AEM.02776-15. Print 2016 Jan 1.

13.

Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Sayavedra L, Kleiner M, Ponnudurai R, Wetzel S, Pelletier E, Barbe V, Satoh N, Shoguchi E, Fink D, Breusing C, Reusch TB, Rosenstiel P, Schilhabel MB, Becher D, Schweder T, Markert S, Dubilier N, Petersen JM.

Elife. 2015 Sep 15;4:e07966. doi: 10.7554/eLife.07966.

14.

Use of carbon monoxide and hydrogen by a bacteria-animal symbiosis from seagrass sediments.

Kleiner M, Wentrup C, Holler T, Lavik G, Harder J, Lott C, Littmann S, Kuypers MM, Dubilier N.

Environ Microbiol. 2015 Dec;17(12):5023-35. doi: 10.1111/1462-2920.12912. Epub 2015 Jul 23.

15.
16.

Gene swapping in the dead zone.

Petersen J, Dubilier N.

Elife. 2014 Oct 13;3:e04600. doi: 10.7554/eLife.04600.

17.

Forever competent: deep-sea bivalves are colonized by their chemosynthetic symbionts throughout their lifetime.

Wentrup C, Wendeberg A, Schimak M, Borowski C, Dubilier N.

Environ Microbiol. 2014 Dec;16(12):3699-713. doi: 10.1111/1462-2920.12597. Epub 2014 Dec 11.

PMID:
25142549
18.

Nature's microbiome: introduction.

Russell JA, Dubilier N, Rudgers JA.

Mol Ecol. 2014 Mar;23(6):1225-37. doi: 10.1111/mec.12676. No abstract available.

PMID:
24628935
19.

Dual symbiosis with co-occurring sulfur-oxidizing symbionts in vestimentiferan tubeworms from a Mediterranean hydrothermal vent.

Zimmermann J, Lott C, Weber M, Ramette A, Bright M, Dubilier N, Petersen JM.

Environ Microbiol. 2014 Dec;16(12):3638-56. doi: 10.1111/1462-2920.12427. Epub 2014 Apr 2.

PMID:
24552661
20.

The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria.

Jan C, Petersen JM, Werner J, Teeling H, Huang S, Glöckner FO, Golyshina OV, Dubilier N, Golyshin PN, Jebbar M, Cambon-Bonavita MA.

Environ Microbiol. 2014 Sep;16(9):2723-38. doi: 10.1111/1462-2920.12406. Epub 2014 Mar 4.

PMID:
24447589
21.

Metaproteomics reveals abundant transposase expression in mutualistic endosymbionts.

Kleiner M, Young JC, Shah M, VerBerkmoes NC, Dubilier N.

MBio. 2013 Jun 18;4(3):e00223-13. doi: 10.1128/mBio.00223-13.

22.

Animals in a bacterial world, a new imperative for the life sciences.

McFall-Ngai M, Hadfield MG, Bosch TC, Carey HV, Domazet-Lošo T, Douglas AE, Dubilier N, Eberl G, Fukami T, Gilbert SF, Hentschel U, King N, Kjelleberg S, Knoll AH, Kremer N, Mazmanian SK, Metcalf JL, Nealson K, Pierce NE, Rawls JF, Reid A, Ruby EG, Rumpho M, Sanders JG, Tautz D, Wernegreen JJ.

Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3229-36. doi: 10.1073/pnas.1218525110. Epub 2013 Feb 7. Review.

23.

Shift from widespread symbiont infection of host tissues to specific colonization of gills in juvenile deep-sea mussels.

Wentrup C, Wendeberg A, Huang JY, Borowski C, Dubilier N.

ISME J. 2013 Jun;7(6):1244-7. doi: 10.1038/ismej.2013.5. Epub 2013 Feb 7.

24.

Bacterial symbionts of Bathymodiolus mussels and Escarpia tubeworms from Chapopote, an asphalt seep in the Southern Gulf of Mexico.

Raggi L, Schubotz F, Hinrichs KU, Dubilier N, Petersen JM.

Environ Microbiol. 2013 Jul;15(7):1969-87. doi: 10.1111/1462-2920.12051. Epub 2012 Dec 23.

PMID:
23279012
25.

Convergent and divergent evolution of metabolism in sulfur-oxidizing symbionts and the role of horizontal gene transfer.

Kleiner M, Petersen JM, Dubilier N.

Curr Opin Microbiol. 2012 Oct;15(5):621-31. doi: 10.1016/j.mib.2012.09.003. Epub 2012 Oct 12. Review.

PMID:
23068075
26.

Origins and evolutionary flexibility of chemosynthetic symbionts from deep-sea animals.

Petersen JM, Wentrup C, Verna C, Knittel K, Dubilier N.

Biol Bull. 2012 Aug;223(1):123-37. Erratum in: Biol Bull. 2012 Dec;223(3):x.

PMID:
22983038
27.

Genetic connectivity between north and south Mid-Atlantic Ridge chemosynthetic bivalves and their symbionts.

van der Heijden K, Petersen JM, Dubilier N, Borowski C.

PLoS One. 2012;7(7):e39994. doi: 10.1371/journal.pone.0039994. Epub 2012 Jul 6.

28.

Plasticity of symbiont acquisition throughout the life cycle of the shallow-water tropical lucinid Codakia orbiculata (Mollusca: Bivalvia).

Gros O, Elisabeth NH, Gustave SD, Caro A, Dubilier N.

Environ Microbiol. 2012 Jun;14(6):1584-95. doi: 10.1111/j.1462-2920.2012.02748.x. Epub 2012 Apr 17.

PMID:
22672589
29.

Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use.

Kleiner M, Wentrup C, Lott C, Teeling H, Wetzel S, Young J, Chang YJ, Shah M, VerBerkmoes NC, Zarzycki J, Fuchs G, Markert S, Hempel K, Voigt B, Becher D, Liebeke M, Lalk M, Albrecht D, Hecker M, Schweder T, Dubilier N.

Proc Natl Acad Sci U S A. 2012 May 8;109(19):E1173-82. doi: 10.1073/pnas.1121198109. Epub 2012 Apr 18.

30.

Hydrogen is an energy source for hydrothermal vent symbioses.

Petersen JM, Zielinski FU, Pape T, Seifert R, Moraru C, Amann R, Hourdez S, Girguis PR, Wankel SD, Barbe V, Pelletier E, Fink D, Borowski C, Bach W, Dubilier N.

Nature. 2011 Aug 10;476(7359):176-80. doi: 10.1038/nature10325.

PMID:
21833083
31.

Expression patterns of mRNAs for methanotrophy and thiotrophy in symbionts of the hydrothermal vent mussel Bathymodiolus puteoserpentis.

Wendeberg A, Zielinski FU, Borowski C, Dubilier N.

ISME J. 2012 Jan;6(1):104-12. doi: 10.1038/ismej.2011.81. Epub 2011 Jul 7.

32.

Pathways of carbon and energy metabolism of the epibiotic community associated with the deep-sea hydrothermal vent shrimp Rimicaris exoculata.

Hügler M, Petersen JM, Dubilier N, Imhoff JF, Sievert SM.

PLoS One. 2011 Jan 7;6(1):e16018. doi: 10.1371/journal.pone.0016018.

33.

High symbiont diversity in the bone-eating worm Osedax mucofloris from shallow whale-falls in the North Atlantic.

Verna C, Ramette A, Wiklund H, Dahlgren TG, Glover AG, Gaill F, Dubilier N.

Environ Microbiol. 2010 Aug;12(8):2355-70. doi: 10.1111/j.1462-2920.2010.02299.x.

PMID:
21966925
34.

Gamma- and epsilonproteobacterial ectosymbionts of a shallow-water marine worm are related to deep-sea hydrothermal vent ectosymbionts.

Ruehland C, Dubilier N.

Environ Microbiol. 2010 Aug;12(8):2312-26. doi: 10.1111/j.1462-2920.2010.02256.x. Epub 2010 Jun 7.

PMID:
21966922
35.

Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields.

Petersen JM, Ramette A, Lott C, Cambon-Bonavita MA, Zbinden M, Dubilier N.

Environ Microbiol. 2010 Aug;12(8):2204-18. doi: 10.1111/j.1462-2920.2009.02129.x. Epub 2009 Dec 27.

PMID:
21966914
36.

Methanotrophic symbioses in marine invertebrates.

Petersen JM, Dubilier N.

Environ Microbiol Rep. 2009 Oct;1(5):319-35. doi: 10.1111/j.1758-2229.2009.00081.x.

PMID:
23765884
37.

Widespread occurrence of an intranuclear bacterial parasite in vent and seep bathymodiolin mussels.

Zielinski FU, Pernthaler A, Duperron S, Raggi L, Giere O, Borowski C, Dubilier N.

Environ Microbiol. 2009 May;11(5):1150-67. doi: 10.1111/j.1462-2920.2008.01847.x. Epub 2009 Feb 17.

PMID:
19226299
38.

Symbiotic diversity in marine animals: the art of harnessing chemosynthesis.

Dubilier N, Bergin C, Lott C.

Nat Rev Microbiol. 2008 Oct;6(10):725-40. doi: 10.1038/nrmicro1992. Review.

PMID:
18794911
39.

Ammonia-oxidizing Crenarchaeota and nitrification inside the tissue of a colonial ascidian.

Martínez-García M, Stief P, Díaz-Valdés M, Wanner G, Ramos-Esplá A, Dubilier N, Antón J.

Environ Microbiol. 2008 Nov;10(11):2991-3001. doi: 10.1111/j.1462-2920.2008.01761.x. Epub 2008 Sep 10.

PMID:
18793310
40.

Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments.

Ruehland C, Blazejak A, Lott C, Loy A, Erséus C, Dubilier N.

Environ Microbiol. 2008 Dec;10(12):3404-16. doi: 10.1111/j.1462-2920.2008.01728.x. Epub 2008 Sep 1.

PMID:
18764872
41.

Endosymbioses between bacteria and deep-sea siboglinid tubeworms from an Arctic Cold Seep (Haakon Mosby Mud Volcano, Barents Sea).

Lösekann T, Robador A, Niemann H, Knittel K, Boetius A, Dubilier N.

Environ Microbiol. 2008 Dec;10(12):3237-54. doi: 10.1111/j.1462-2920.2008.01712.x. Epub 2008 Aug 14.

PMID:
18707616
42.

Diversity, relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussel species from cold seeps in the Gulf of Mexico.

Duperron S, Sibuet M, MacGregor BJ, Kuypers MM, Fisher CR, Dubilier N.

Environ Microbiol. 2007 Jun;9(6):1423-38.

PMID:
17504480
43.

Molecular and morphological characterization of the association between bacterial endosymbionts and the marine nematode Astomonema sp. from the Bahamas.

Musat N, Giere O, Gieseke A, Thiermann F, Amann R, Dubilier N.

Environ Microbiol. 2007 May;9(5):1345-53.

PMID:
17472647
44.

Enigmatic dual symbiosis in the excretory organ of Nautilus macromphalus (Cephalopoda: Nautiloidea).

Pernice M, Wetzel S, Gros O, Boucher-Rodoni R, Dubilier N.

Proc Biol Sci. 2007 May 7;274(1614):1143-52.

45.

The searchlight and the bucket of microbial ecology.

Dubilier N.

Environ Microbiol. 2007 Jan;9(1):2-3. No abstract available.

PMID:
17227399
46.

Symbiosis insights through metagenomic analysis of a microbial consortium.

Woyke T, Teeling H, Ivanova NN, Huntemann M, Richter M, Gloeckner FO, Boffelli D, Anderson IJ, Barry KW, Shapiro HJ, Szeto E, Kyrpides NC, Mussmann M, Amann R, Bergin C, Ruehland C, Rubin EM, Dubilier N.

Nature. 2006 Oct 26;443(7114):950-5. Epub 2006 Sep 17.

PMID:
16980956
48.

A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge.

Duperron S, Bergin C, Zielinski F, Blazejak A, Pernthaler A, McKiness ZP, DeChaine E, Cavanaugh CM, Dubilier N.

Environ Microbiol. 2006 Aug;8(8):1441-7.

PMID:
16872406
49.

Symbioses between bacteria and gutless marine oligochaetes.

Dubilier N, Blazejak A, Rühland C.

Prog Mol Subcell Biol. 2006;41:251-75. Review. No abstract available.

PMID:
16623397
50.

Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea.

Musat N, Werner U, Knittel K, Kolb S, Dodenhof T, van Beusekom JE, de Beer D, Dubilier N, Amann R.

Syst Appl Microbiol. 2006 Jun;29(4):333-48. Epub 2006 Jan 23.

PMID:
16431068

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