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Identification of a candidate gene for a QTL for spikelet number per spike on wheat chromosome arm 7AL by high-resolution genetic mapping.

Kuzay S, Xu Y, Zhang J, Katz A, Pearce S, Su Z, Fraser M, Anderson JA, Brown-Guedira G, DeWitt N, Peters Haugrud A, Faris JD, Akhunov E, Bai G, Dubcovsky J.

Theor Appl Genet. 2019 Jun 28. doi: 10.1007/s00122-019-03382-5. [Epub ahead of print]


A wheat/rye polymorphism affects seminal root length and yield across different irrigation regimes.

Howell T, Moriconi JI, Zhao X, Hegarty J, Fahima T, Santa-Maria GE, Dubcovsky J.

J Exp Bot. 2019 Apr 12. pii: erz169. doi: 10.1093/jxb/erz169. [Epub ahead of print]


A High-Resolution Map of Wheat QYr.ucw-1BL, an Adult Plant Stripe Rust Resistance Locus in the Same Chromosomal Region as Yr29.

Cobo N, Wanjugi H, Lagudah E, Dubcovsky J.

Plant Genome. 2019 Mar;12(1). doi: 10.3835/plantgenome2018.08.0055.


Genetic Relationship of Stripe Rust Resistance Genes Yr34 and Yr48 in Wheat and Identification of Linked KASP Markers.

Qureshi N, Bariana HS, Zhang P, McIntosh R, Bansal UK, Wong D, Hayden MJ, Dubcovsky J, Shankar M.

Plant Dis. 2018 Feb;102(2):413-420. doi: 10.1094/PDIS-08-17-1144-RE. Epub 2017 Dec 14.


Correction to: Mapping and characterization of wheat stem rust resistance genes SrTm5 and Sr60 from Triticum monococcum.

Chen S, Guo Y, Briggs J, Dubach F, Chao S, Zhang W, Rouse MN, Dubcovsky J.

Theor Appl Genet. 2018 Nov;131(11):2493. doi: 10.1007/s00122-018-3194-3.


FLOWERING LOCUS T2 regulates spike development and fertility in temperate cereals.

Shaw LM, Lyu B, Turner R, Li C, Chen F, Han X, Fu D, Dubcovsky J.

J Exp Bot. 2019 Jan 1;70(1):193-204. doi: 10.1093/jxb/ery350.


Cloning of the wheat Yr15 resistance gene sheds light on the plant tandem kinase-pseudokinase family.

Klymiuk V, Yaniv E, Huang L, Raats D, Fatiukha A, Chen S, Feng L, Frenkel Z, Krugman T, Lidzbarsky G, Chang W, Jääskeläinen MJ, Schudoma C, Paulin L, Laine P, Bariana H, Sela H, Saleem K, Sørensen CK, Hovmøller MS, Distelfeld A, Chalhoub B, Dubcovsky J, Korol AB, Schulman AH, Fahima T.

Nat Commun. 2018 Oct 3;9(1):3735. doi: 10.1038/s41467-018-06138-9.


Correction to: Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes.

Kippes N, Chen A, Zhang X, Lukaszewski AJ, Dubcovsky J.

Theor Appl Genet. 2018 Oct;131(10):2269. doi: 10.1007/s00122-018-3141-3.


Identification and characterization of Rht25, a locus on chromosome arm 6AS affecting wheat plant height, heading time, and spike development.

Mo Y, Vanzetti LS, Hale I, Spagnolo EJ, Guidobaldi F, Al-Oboudi J, Odle N, Pearce S, Helguera M, Dubcovsky J.

Theor Appl Genet. 2018 Oct;131(10):2021-2035. doi: 10.1007/s00122-018-3130-6. Epub 2018 Jun 29.


The genetic architecture of genome-wide recombination rate variation in allopolyploid wheat revealed by nested association mapping.

Jordan KW, Wang S, He F, Chao S, Lun Y, Paux E, Sourdille P, Sherman J, Akhunova A, Blake NK, Pumphrey MO, Glover K, Dubcovsky J, Talbert L, Akhunov ED.

Plant J. 2018 Sep;95(6):1039-1054. doi: 10.1111/tpj.14009. Epub 2018 Jul 19.


Single nucleotide polymorphisms in a regulatory site of VRN-A1 first intron are associated with differences in vernalization requirement in winter wheat.

Kippes N, Guedira M, Lin L, Alvarez MA, Brown-Guedira GL, Dubcovsky J.

Mol Genet Genomics. 2018 Oct;293(5):1231-1243. doi: 10.1007/s00438-018-1455-0. Epub 2018 Jun 5.


Identification and validation of QTL for grain yield and plant water status under contrasting water treatments in fall-sown spring wheats.

Zhang J, Gizaw SA, Bossolini E, Hegarty J, Howell T, Carter AH, Akhunov E, Dubcovsky J.

Theor Appl Genet. 2018 Aug;131(8):1741-1759. doi: 10.1007/s00122-018-3111-9. Epub 2018 May 16.


Identification and characterization of wheat stem rust resistance gene Sr21 effective against the Ug99 race group at high temperature.

Chen S, Zhang W, Bolus S, Rouse MN, Dubcovsky J.

PLoS Genet. 2018 Apr 3;14(4):e1007287. doi: 10.1371/journal.pgen.1007287. eCollection 2018 Apr.


Variation in the AvrSr35 gene determines Sr35 resistance against wheat stem rust race Ug99.

Salcedo A, Rutter W, Wang S, Akhunova A, Bolus S, Chao S, Anderson N, De Soto MF, Rouse M, Szabo L, Bowden RL, Dubcovsky J, Akhunov E.

Science. 2017 Dec 22;358(6370):1604-1606. doi: 10.1126/science.aao7294.


Mapping causal mutations by exome sequencing in a wheat TILLING population: a tall mutant case study.

Mo Y, Howell T, Vasquez-Gross H, de Haro LA, Dubcovsky J, Pearce S.

Mol Genet Genomics. 2018 Apr;293(2):463-477. doi: 10.1007/s00438-017-1401-6. Epub 2017 Nov 29.


Mapping and characterization of wheat stem rust resistance genes SrTm5 and Sr60 from Triticum monococcum.

Chen S, Guo Y, Briggs J, Dubach F, Chao S, Zhang W, Rouse MN, Dubcovsky J.

Theor Appl Genet. 2018 Mar;131(3):625-635. doi: 10.1007/s00122-017-3024-z. Epub 2017 Nov 21. Erratum in: Theor Appl Genet. 2018 Nov;131(11):2493.


Identification and characterization of Sr13, a tetraploid wheat gene that confers resistance to the Ug99 stem rust race group.

Zhang W, Chen S, Abate Z, Nirmala J, Rouse MN, Dubcovsky J.

Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):E9483-E9492. doi: 10.1073/pnas.1706277114. Epub 2017 Oct 23.


Combining Traditional Mutagenesis with New High-Throughput Sequencing and Genome Editing to Reveal Hidden Variation in Polyploid Wheat.

Uauy C, Wulff BBH, Dubcovsky J.

Annu Rev Genet. 2017 Nov 27;51:435-454. doi: 10.1146/annurev-genet-120116-024533. Epub 2017 Sep 20. Review.


Characterization and Mapping of Leaf Rust and Stripe Rust Resistance Loci in Hexaploid Wheat Lines UC1110 and PI610750 under Mexican Environments.

Lan C, Hale IL, Herrera-Foessel SA, Basnet BR, Randhawa MS, Huerta-Espino J, Dubcovsky J, Singh RP.

Front Plant Sci. 2017 Aug 21;8:1450. doi: 10.3389/fpls.2017.01450. eCollection 2017.


Validation and characterization of a QTL for adult plant resistance to stripe rust on wheat chromosome arm 6BS (Yr78).

Dong Z, Hegarty JM, Zhang J, Zhang W, Chao S, Chen X, Zhou Y, Dubcovsky J.

Theor Appl Genet. 2017 Oct;130(10):2127-2137. doi: 10.1007/s00122-017-2946-9. Epub 2017 Jul 19.


microRNA172 plays a crucial role in wheat spike morphogenesis and grain threshability.

Debernardi JM, Lin H, Chuck G, Faris JD, Dubcovsky J.

Development. 2017 Jun 1;144(11):1966-1975. doi: 10.1242/dev.146399. Epub 2017 Apr 28.


Night-Break Experiments Shed Light on the Photoperiod1-Mediated Flowering.

Pearce S, Shaw LM, Lin H, Cotter JD, Li C, Dubcovsky J.

Plant Physiol. 2017 Jun;174(2):1139-1150. doi: 10.1104/pp.17.00361. Epub 2017 Apr 13.


Uncovering hidden variation in polyploid wheat.

Krasileva KV, Vasquez-Gross HA, Howell T, Bailey P, Paraiso F, Clissold L, Simmonds J, Ramirez-Gonzalez RH, Wang X, Borrill P, Fosker C, Ayling S, Phillips AL, Uauy C, Dubcovsky J.

Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):E913-E921. doi: 10.1073/pnas.1619268114. Epub 2017 Jan 17.


A Conserved Puccinia striiformis Protein Interacts with Wheat NPR1 and Reduces Induction of Pathogenesis-Related Genes in Response to Pathogens.

Wang X, Yang B, Li K, Kang Z, Cantu D, Dubcovsky J.

Mol Plant Microbe Interact. 2016 Dec;29(12):977-989. doi: 10.1094/MPMI-10-16-0207-R. Epub 2017 Jan 4.


Registration of Common Wheat Germplasm with Mutations in SBEII Genes Conferring Increased Grain Amylose and Resistant Starch Content.

Schönhofen A, Hazard B, Zhang X, Dubcovsky J.

J Plant Regist. 2016 May;10(2):200-205. Epub 2016 Mar 23.


The 2NS Translocation from Aegilops ventricosa Confers Resistance to the Triticum Pathotype of Magnaporthe oryzae.

Cruz CD, Peterson GL, Bockus WW, Kankanala P, Dubcovsky J, Jordan KW, Akhunov E, Chumley F, Baldelomar FD, Valent B.

Crop Sci. 2016;56(3):990-1000. Epub 2016 Mar 23.


Erratum to: Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium.

Faricelli ME, Valárik M, Dubcovsky J.

Funct Integr Genomics. 2016 Sep;16(5):593. No abstract available.


Distinct expression and function of carotenoid metabolic genes and homoeologs in developing wheat grains.

Qin X, Fischer K, Yu S, Dubcovsky J, Tian L.

BMC Plant Biol. 2016 Jul 12;16(1):155. doi: 10.1186/s12870-016-0848-7.


RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways.

Pearce S, Kippes N, Chen A, Debernardi JM, Dubcovsky J.

BMC Plant Biol. 2016 Jun 21;16(1):141. doi: 10.1186/s12870-016-0831-3.


Mutations in Durum Wheat SBEII Genes affect Grain Yield Components, Quality, and Fermentation Responses in Rats.

Hazard B, Zhang X, Naemeh M, Hamilton MK, Rust B, Raybould HE, Newman JW, Martin R, Dubcovsky J.

Crop Sci. 2015 Nov-Dec;55(6):2813-2825. Epub 2015 Oct 19.


Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes.

Kippes N, Chen A, Zhang X, Lukaszewski AJ, Dubcovsky J.

Theor Appl Genet. 2016 Jul;129(7):1417-1428. doi: 10.1007/s00122-016-2713-3. Epub 2016 Apr 25. Erratum in: Theor Appl Genet. 2018 Oct;131(10):2269.


Genetic and physical mapping of the earliness per se locus Eps-A (m) 1 in Triticum monococcum identifies EARLY FLOWERING 3 (ELF3) as a candidate gene.

Alvarez MA, Tranquilli G, Lewis S, Kippes N, Dubcovsky J.

Funct Integr Genomics. 2016 Jul;16(4):365-82. doi: 10.1007/s10142-016-0490-3. Epub 2016 Apr 16.


The stay-green phenotype of TaNAM-RNAi wheat plants is associated with maintenance of chloroplast structure and high enzymatic antioxidant activity.

Checovich ML, Galatro A, Moriconi JI, Simontacchi M, Dubcovsky J, Santa-María GE.

Plant Physiol Biochem. 2016 Jul;104:257-65. doi: 10.1016/j.plaphy.2016.03.035. Epub 2016 Mar 29.


A splice acceptor site mutation in TaGW2-A1 increases thousand grain weight in tetraploid and hexaploid wheat through wider and longer grains.

Simmonds J, Scott P, Brinton J, Mestre TC, Bush M, Del Blanco A, Dubcovsky J, Uauy C.

Theor Appl Genet. 2016 Jun;129(6):1099-112. doi: 10.1007/s00122-016-2686-2. Epub 2016 Feb 16.


Fine mapping of barley locus Rps6 conferring resistance to wheat stripe rust.

Li K, Hegarty J, Zhang C, Wan A, Wu J, Guedira GB, Chen X, Muñoz-Amatriaín M, Fu D, Dubcovsky J.

Theor Appl Genet. 2016 Apr;129(4):845-859. doi: 10.1007/s00122-015-2663-1. Epub 2016 Feb 13.


Distribution and haplotype diversity of WKS resistance genes in wild emmer wheat natural populations.

Huang L, Sela H, Feng L, Chen Q, Krugman T, Yan J, Dubcovsky J, Fahima T.

Theor Appl Genet. 2016 May;129(5):921-34. doi: 10.1007/s00122-016-2672-8. Epub 2016 Feb 5.


WheatExp: an RNA-seq expression database for polyploid wheat.

Pearce S, Vazquez-Gross H, Herin SY, Hane D, Wang Y, Gu YQ, Dubcovsky J.

BMC Plant Biol. 2015 Dec 24;15:299. doi: 10.1186/s12870-015-0692-1.


Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia.

Kippes N, Debernardi JM, Vasquez-Gross HA, Akpinar BA, Budak H, Kato K, Chao S, Akhunov E, Dubcovsky J.

Proc Natl Acad Sci U S A. 2015 Sep 29;112(39):E5401-10. doi: 10.1073/pnas.1514883112. Epub 2015 Aug 31.


Factorial combinations of protein interactions generate a multiplicity of florigen activation complexes in wheat and barley.

Li C, Lin H, Dubcovsky J.

Plant J. 2015 Oct;84(1):70-82. doi: 10.1111/tpj.12960. Epub 2015 Sep 6.


Heterologous expression and transcript analysis of gibberellin biosynthetic genes of grasses reveals novel functionality in the GA3ox family.

Pearce S, Huttly AK, Prosser IM, Li YD, Vaughan SP, Gallova B, Patil A, Coghill JA, Dubcovsky J, Hedden P, Phillips AL.

BMC Plant Biol. 2015 Jun 5;15:130. doi: 10.1186/s12870-015-0520-7.


Wheat Stripe Rust Resistance Protein WKS1 Reduces the Ability of the Thylakoid-Associated Ascorbate Peroxidase to Detoxify Reactive Oxygen Species.

Gou JY, Li K, Wu K, Wang X, Lin H, Cantu D, Uauy C, Dobon-Alonso A, Midorikawa T, Inoue K, Sánchez J, Fu D, Blechl A, Wallington E, Fahima T, Meeta M, Epstein L, Dubcovsky J.

Plant Cell. 2015 Jun;27(6):1755-70. doi: 10.1105/tpc.114.134296. Epub 2015 May 19.


A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes.

Jordan KW, Wang S, Lun Y, Gardiner LJ, MacLachlan R, Hucl P, Wiebe K, Wong D, Forrest KL; IWGS Consortium, Sharpe AG, Sidebottom CH, Hall N, Toomajian C, Close T, Dubcovsky J, Akhunova A, Talbert L, Bansal UK, Bariana HS, Hayden MJ, Pozniak C, Jeddeloh JA, Hall A, Akhunov E.

Genome Biol. 2015 Feb 26;16:48. doi: 10.1186/s13059-015-0606-4.


Mapping of SrTm4, a Recessive Stem Rust Resistance Gene from Diploid Wheat Effective to Ug99.

Briggs J, Chen S, Zhang W, Nelson S, Dubcovsky J, Rouse MN.

Phytopathology. 2015 Oct;105(10):1347-54. doi: 10.1094/PHYTO-12-14-0382-R. Epub 2015 Sep 4.


Effect of Allelic Variation at the Glu-3/Gli-1 Loci on Breadmaking Quality Parameters in Hexaploid Wheat (Triticum aestivum L.).

Bonafede MD, Tranquilli G, Pflüger LA, Peña RJ, Dubcovsky J.

J Cereal Sci. 2015 Mar;62:143-150. Epub 2015 Feb 26.


Fine mapping and characterization of Sr21, a temperature-sensitive diploid wheat resistance gene effective against the Puccinia graminis f. sp. tritici Ug99 race group.

Chen S, Rouse MN, Zhang W, Jin Y, Akhunov E, Wei Y, Dubcovsky J.

Theor Appl Genet. 2015 Apr;128(4):645-56. doi: 10.1007/s00122-015-2460-x. Epub 2015 Jan 30.


A genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a worldwide collection of hexaploid spring wheat (Triticum aestivum L.).

Maccaferri M, Zhang J, Bulli P, Abate Z, Chao S, Cantu D, Bossolini E, Chen X, Pumphrey M, Dubcovsky J.

G3 (Bethesda). 2015 Jan 20;5(3):449-65. doi: 10.1534/g3.114.014563.


A New Map Location of Gene Stb3 for Resistance to Septoria Tritici Blotch in Wheat.

Goodwin SB, Cavaletto JR, Hale IL, Thompson I, Xu SX, Adhikari TB, Dubcovsky J.

Crop Sci. 2015 Jan-Feb;55(1):35-43. Epub 2014 Oct 31.


Evaluation of marker-assisted selection for the stripe rust resistance gene Yr15, introgressed from wild emmer wheat.

Yaniv E, Raats D, Ronin Y, Korol AB, Grama A, Bariana H, Dubcovsky J, Schulman AH.

Mol Breed. 2015 Jan;35(1). pii: 43. Epub 2015 Jan 23.


A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding.

Maccaferri M, Ricci A, Salvi S, Milner SG, Noli E, Martelli PL, Casadio R, Akhunov E, Scalabrin S, Vendramin V, Ammar K, Blanco A, Desiderio F, Distelfeld A, Dubcovsky J, Fahima T, Faris J, Korol A, Massi A, Mastrangelo AM, Morgante M, Pozniak C, N'Diaye A, Xu S, Tuberosa R.

Plant Biotechnol J. 2015 Jun;13(5):648-63. doi: 10.1111/pbi.12288. Epub 2014 Nov 26.

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