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Items: 35

1.

Isolation of neutralizing monoclonal antibodies to human astrovirus and characterization of virus variants that escape neutralization.

Espinosa R, López T, Bogdanoff WA, Espinoza MA, López S, DuBois RM, Arias CF.

J Virol. 2018 Oct 24. pii: JVI.01465-18. doi: 10.1128/JVI.01465-18. [Epub ahead of print]

PMID:
30355681
2.

Structures of respiratory syncytial virus G antigen bound to broadly neutralizing antibodies.

Fedechkin SO, George NL, Wolff JT, Kauvar LM, DuBois RM.

Sci Immunol. 2018 Mar 9;3(21). pii: eaar3534. doi: 10.1126/sciimmunol.aar3534. Epub 2018 Mar 9.

3.

Structural Basis for Escape of Human Astrovirus from Antibody Neutralization: Broad Implications for Rational Vaccine Design.

Bogdanoff WA, Perez EI, López T, Arias CF, DuBois RM.

J Virol. 2017 Dec 14;92(1). pii: e01546-17. doi: 10.1128/JVI.01546-17. Print 2018 Jan 1.

4.

Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells.

Byrne A, Beaudin AE, Olsen HE, Jain M, Cole C, Palmer T, DuBois RM, Forsberg EC, Akeson M, Vollmers C.

Nat Commun. 2017 Jul 19;8:16027. doi: 10.1038/ncomms16027.

5.

The Astrovirus Capsid: A Review.

Arias CF, DuBois RM.

Viruses. 2017 Jan 19;9(1). pii: E15. doi: 10.3390/v9010015. Review.

6.

Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes.

Lu Z, Hofmeister BT, Vollmers C, DuBois RM, Schmitz RJ.

Nucleic Acids Res. 2017 Apr 7;45(6):e41. doi: 10.1093/nar/gkw1179.

7.

Structure of a Human Astrovirus Capsid-Antibody Complex and Mechanistic Insights into Virus Neutralization.

Bogdanoff WA, Campos J, Perez EI, Yin L, Alexander DL, DuBois RM.

J Virol. 2017 Jan 3;91(2). pii: e01859-16. doi: 10.1128/JVI.01859-16. Print 2017 Jan 15.

8.

De Novo Sequencing and Resurrection of a Human Astrovirus-Neutralizing Antibody.

Bogdanoff WA, Morgenstern D, Bern M, Ueberheide BM, Sanchez-Fauquier A, DuBois RM.

ACS Infect Dis. 2016 May 13;2(5):313-321. Epub 2016 Mar 14.

9.

Structural, Mechanistic, and Antigenic Characterization of the Human Astrovirus Capsid.

York RL, Yousefi PA, Bogdanoff W, Haile S, Tripathi S, DuBois RM.

J Virol. 2015 Dec 9;90(5):2254-63. doi: 10.1128/JVI.02666-15.

10.

Crystal structure of the avian astrovirus capsid spike.

DuBois RM, Freiden P, Marvin S, Reddivari M, Heath RJ, White SW, Schultz-Cherry S.

J Virol. 2013 Jul;87(14):7853-63. doi: 10.1128/JVI.03139-12. Epub 2013 May 8.

11.

Functional and evolutionary insight from the crystal structure of rubella virus protein E1.

DuBois RM, Vaney MC, Tortorici MA, Kurdi RA, Barba-Spaeth G, Krey T, Rey FA.

Nature. 2013 Jan 24;493(7433):552-6. doi: 10.1038/nature11741. Epub 2013 Jan 6.

PMID:
23292515
12.

Structural and biochemical basis for development of influenza virus inhibitors targeting the PA endonuclease.

DuBois RM, Slavish PJ, Baughman BM, Yun MK, Bao J, Webby RJ, Webb TR, White SW.

PLoS Pathog. 2012;8(8):e1002830. doi: 10.1371/journal.ppat.1002830. Epub 2012 Aug 2.

13.

Identification of influenza endonuclease inhibitors using a novel fluorescence polarization assay.

Baughman BM, Jake Slavish P, DuBois RM, Boyd VA, White SW, Webb TR.

ACS Chem Biol. 2012 Mar 16;7(3):526-34. doi: 10.1021/cb200439z. Epub 2012 Jan 19.

14.

Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.

DuBois RM, Zaraket H, Reddivari M, Heath RJ, White SW, Russell CJ.

PLoS Pathog. 2011 Dec;7(12):e1002398. doi: 10.1371/journal.ppat.1002398. Epub 2011 Dec 1.

15.

Role of endoplasmic reticulum stress in epithelial-mesenchymal transition of alveolar epithelial cells: effects of misfolded surfactant protein.

Zhong Q, Zhou B, Ann DK, Minoo P, Liu Y, Banfalvi A, Krishnaveni MS, Dubourd M, Demaio L, Willis BC, Kim KJ, duBois RM, Crandall ED, Beers MF, Borok Z.

Am J Respir Cell Mol Biol. 2011 Sep;45(3):498-509. doi: 10.1165/rcmb.2010-0347OC. Epub 2010 Dec 17.

16.

Structure of a core fragment of glycoprotein H from pseudorabies virus in complex with antibody.

Backovic M, DuBois RM, Cockburn JJ, Sharff AJ, Vaney MC, Granzow H, Klupp BG, Bricogne G, Mettenleiter TC, Rey FA.

Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22635-40. doi: 10.1073/pnas.1011507107. Epub 2010 Dec 13.

17.

The receptor-binding domain of influenza virus hemagglutinin produced in Escherichia coli folds into its native, immunogenic structure.

DuBois RM, Aguilar-Yañez JM, Mendoza-Ochoa GI, Oropeza-Almazán Y, Schultz-Cherry S, Alvarez MM, White SW, Russell CJ.

J Virol. 2011 Jan;85(2):865-72. doi: 10.1128/JVI.01412-10. Epub 2010 Nov 10.

18.

An influenza A/H1N1/2009 hemagglutinin vaccine produced in Escherichia coli.

Aguilar-Yáñez JM, Portillo-Lara R, Mendoza-Ochoa GI, García-Echauri SA, López-Pacheco F, Bulnes-Abundis D, Salgado-Gallegos J, Lara-Mayorga IM, Webb-Vargas Y, León-Angel FO, Rivero-Aranda RE, Oropeza-Almazán Y, Ruiz-Palacios GM, Zertuche-Guerra MI, DuBois RM, White SW, Schultz-Cherry S, Russell CJ, Alvarez MM.

PLoS One. 2010 Jul 22;5(7):e11694. doi: 10.1371/journal.pone.0011694.

19.

Antiviral susceptibility of avian and swine influenza virus of the N1 neuraminidase subtype.

Stoner TD, Krauss S, DuBois RM, Negovetich NJ, Stallknecht DE, Senne DA, Gramer MR, Swafford S, DeLiberto T, Govorkova EA, Webster RG.

J Virol. 2010 Oct;84(19):9800-9. doi: 10.1128/JVI.00296-10. Epub 2010 Jul 21.

20.

Amino acid residues in the fusion peptide pocket regulate the pH of activation of the H5N1 influenza virus hemagglutinin protein.

Reed ML, Yen HL, DuBois RM, Bridges OA, Salomon R, Webster RG, Russell CJ.

J Virol. 2009 Apr;83(8):3568-80. doi: 10.1128/JVI.02238-08. Epub 2009 Feb 4.

21.

Single-nucleotide polymorphisms in CCL2 gene are not associated with susceptibility to systemic sclerosis.

Carulli MT, Spagnolo P, Fonseca C, Welsh KI, duBois RM, Black CM, Denton CP.

J Rheumatol. 2008 May;35(5):839-44. Epub 2008 Mar 15.

PMID:
18381789
22.

Epithelial origin of myofibroblasts during fibrosis in the lung.

Willis BC, duBois RM, Borok Z.

Proc Am Thorac Soc. 2006 Jun;3(4):377-82. Review.

23.

KL-6 levels are elevated in plasma from patients with acute respiratory distress syndrome.

Sato H, Callister ME, Mumby S, Quinlan GJ, Welsh KI, duBois RM, Evans TW.

Eur Respir J. 2004 Jan;23(1):142-5.

24.

Pulmonary fibrosis and lung cancer: risk and benefit analysis of pulmonary resection.

Kumar P, Goldstraw P, Yamada K, Nicholson AG, Wells AU, Hansell DM, Dubois RM, Ladas G.

J Thorac Cardiovasc Surg. 2003 Jun;125(6):1321-7.

25.

Cytoplasmic deposition of NFkappaB decoy oligonucleotides is insufficient to inhibit bleomycin-induced pulmonary inflammation.

Griesenbach U, Cassady RL, Cain RJ, duBois RM, Geddes DM, Alton EW.

Gene Ther. 2002 Aug;9(16):1109-15.

26.

Nuclear factor-kappaB activation in alveolar macrophages requires IkappaB kinase-beta, but not nuclear factor-kappaB inducing kinase.

Conron M, Andreakos E, Pantelidis P, Smith C, Beynon HL, Dubois RM, Foxwell BM.

Am J Respir Crit Care Med. 2002 Apr 1;165(7):996-1004.

PMID:
11934728
27.

Alveolar macrophages and T cells from sarcoid, but not normal lung, are permissive to adenovirus infection and allow analysis of NF-kappa b-dependent signaling pathways.

Conron M, Bondeson J, Pantelidis P, Beynon HL, Feldmann M, duBois RM, Foxwell BM.

Am J Respir Cell Mol Biol. 2001 Aug;25(2):141-9.

PMID:
11509322
28.

Rapid and effective correction of RF inhomogeneity for high field magnetic resonance imaging.

Cohen MS, DuBois RM, Zeineh MM.

Hum Brain Mapp. 2000 Aug;10(4):204-11.

PMID:
10949058
29.

Spatiotopic organization in human superior colliculus observed with fMRI.

DuBois RM, Cohen MS.

Neuroimage. 2000 Jul;12(1):63-70.

PMID:
10875903
30.
31.

Serial circulating adhesion molecule levels reflect disease severity in systemic sclerosis.

Denton CP, Bickerstaff MC, Shiwen X, Carulli MT, Haskard DO, Dubois RM, Black CM.

Br J Rheumatol. 1995 Nov;34(11):1048-54.

PMID:
8542206
32.

Role of thrombin in pulmonary fibrosis.

Hernández-Rodríguez NA, Cambrey AD, Harrison NK, Chambers RC, Gray AJ, Southcott AM, duBois RM, Black CM, Scully MF, McAnulty RJ, et al.

Lancet. 1995 Oct 21;346(8982):1071-3.

PMID:
7564789
33.

Immunohistochemical localization of transforming growth factor-beta 1 in the lungs of patients with systemic sclerosis, cryptogenic fibrosing alveolitis and other lung disorders.

Corrin B, Butcher D, McAnulty BJ, Dubois RM, Black CM, Laurent GJ, Harrison NK.

Histopathology. 1994 Feb;24(2):145-50.

PMID:
8181807
34.

Enlarged mediastinal lymph nodes in the fibrosing alveolitis of systemic sclerosis.

Garber SJ, Wells AU, duBois RM, Hansell DM.

Br J Radiol. 1992 Nov;65(779):983-6.

PMID:
1450835
35.

Immunogenetic prediction of pulmonary fibrosis in systemic sclerosis.

Briggs DC, Vaughan RW, Welsh KI, Myers A, duBois RM, Black CM.

Lancet. 1991 Sep 14;338(8768):661-2.

PMID:
1679476

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