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Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa.

Sarikaya Bayram Ö, Dettmann A, Karahoda B, Moloney NM, Ormsby T, McGowan J, Cea-Sánchez S, Miralles-Durán A, Brancini GTP, Luque EM, Fitzpatrick DA, Cánovas D, Corrochano LM, Doyle S, Selker EU, Seiler S, Bayram Ö.

Genetics. 2019 May 8. pii: genetics.302277.2019. doi: 10.1534/genetics.119.302277. [Epub ahead of print]


Current perspectives on established and novel therapies for pathological neovascularization in retinal disease.

Campbell M, Doyle SL.

Biochem Pharmacol. 2019 Jun;164:321-325. doi: 10.1016/j.bcp.2019.04.029. Epub 2019 Apr 27. Review.


A role for the auxin precursor anthranilic acid in root gravitropism via regulation of PIN-FORMED protein polarity and relocalization in Arabidopsis.

Doyle SM, Rigal A, Grones P, Karady M, Barange DK, Majda M, Pařízková B, Karampelias M, Zwiewka M, Pěnčik A, Almqvist F, Ljung K, Novák O, Robert S.

New Phytol. 2019 Apr 30. doi: 10.1111/nph.15877. [Epub ahead of print]


Physical Conditions of Fast Glacier Flow: 3. Seasonally-Evolving Ice Deformation on Store Glacier, West Greenland.

Young TJ, Christoffersen P, Doyle SH, Nicholls KW, Stewart CL, Hubbard B, Hubbard A, Lok LB, Brennan PV, Benn DI, Luckman A, Bougamont M.

J Geophys Res Earth Surf. 2019 Jan;124(1):245-267. doi: 10.1029/2018JF004821. Epub 2019 Jan 30.


Nucleic acid cytokine responses in obese children and infants of obese mothers.

Brennan K, O'Leary BD, Mc Laughlin D, Kinlen D, Molloy EJ, Cody D, Paran S, McAuliffe FM, Hogan AE, Doyle SL.

Cytokine. 2019 Jul;119:152-158. doi: 10.1016/j.cyto.2019.03.015. Epub 2019 Mar 23.


Changes in gut hormones, glycaemic response and symptoms after oesophagectomy.

Elliott JA, Docherty NG, Murphy CF, Eckhardt HG, Doyle SL, Guinan EM, Ravi N, Reynolds JV, le Roux CW.

Br J Surg. 2019 May;106(6):735-746. doi: 10.1002/bjs.11118. Epub 2019 Mar 18.


Reliability of the Modified Clavien-Dindo-Sink Complication Classification System in Pediatric Orthopaedic Surgery.

Dodwell ER, Pathy R, Widmann RF, Green DW, Scher DM, Blanco JS, Doyle SM, Daluiski A, Sink EL.

JB JS Open Access. 2018 Oct 23;3(4):e0020. doi: 10.2106/JBJS.OA.18.00020. eCollection 2018 Dec 20.


Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus.

Doyle SR, Illingworth CJR, Laing R, Bartley DJ, Redman E, Martinelli A, Holroyd N, Morrison AA, Rezansoff A, Tracey A, Devaney E, Berriman M, Sargison N, Cotton JA, Gilleard JS.

BMC Genomics. 2019 Mar 15;20(1):218. doi: 10.1186/s12864-019-5592-6.


Integration of a recent infection testing algorithm into HIV surveillance in Ireland: improving HIV knowledge to target prevention.

Robinson E, Moran J, O'Donnell K, Hassan J, Tuite H, Ennis O, Cooney F, Nugent E, Preston L, O'Dea S, Doyle S, Keating S, Connell J, De Gascun C, Igoe D.

Epidemiol Infect. 2019 Jan;147:e136. doi: 10.1017/S0950268819000244.


Unexpected Non-acid Drainage from Sulfidic Rock Waste.

Gerson AR, Rolley PJ, Davis C, Feig ST, Doyle S, Smart RSC.

Sci Rep. 2019 Mar 13;9(1):4357. doi: 10.1038/s41598-019-40357-4.


The effect of surface inclination and limb on knee loading measures in transtibial prosthesis users.

Doyle SS, Lemaire ED, Nantel J, Sinitski EH.

J Neuroeng Rehabil. 2019 Mar 12;16(1):37. doi: 10.1186/s12984-019-0509-9.


Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development.

Vain T, Raggi S, Ferro N, Barange DK, Kieffer M, Ma Q, Doyle SM, Thelander M, Pařízková B, Novák O, Ismail A, Enquist PA, Rigal A, Łangowska M, Ramans Harborough S, Zhang Y, Ljung K, Callis J, Almqvist F, Kepinski S, Estelle M, Pauwels L, Robert S.

Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):6463-6472. doi: 10.1073/pnas.1809037116. Epub 2019 Mar 8.


Direct visualization of coexisting channels of interaction in CeSb.

Jang S, Kealhofer R, John C, Doyle S, Hong JS, Shim JH, Si Q, Erten O, Denlinger JD, Analytis JG.

Sci Adv. 2019 Mar 1;5(3):eaat7158. doi: 10.1126/sciadv.aat7158. eCollection 2019 Mar.


Protocols for Culturing and Imaging a Human Ex Vivo Osteochondral Model for Cartilage Biomanufacturing Applications.

Duchi S, Doyle S, Eekel T, D O'Connell C, Augustine C, Choong P, Onofrillo C, Di Bella C.

Materials (Basel). 2019 Feb 20;12(4). pii: E640. doi: 10.3390/ma12040640.


Campylobacter culture fails to correctly detect Campylobacter in 30% of positive patient stool specimens compared to non-cultural methods.

Buss JE, Cresse M, Doyle S, Buchan BW, Craft DW, Young S.

Eur J Clin Microbiol Infect Dis. 2019 Jun;38(6):1087-1093. doi: 10.1007/s10096-019-03499-x. Epub 2019 Feb 19.


E93 Integrates Neuroblast Intrinsic State with Developmental Time to Terminate MB Neurogenesis via Autophagy.

Pahl MC, Doyle SE, Siegrist SE.

Curr Biol. 2019 Mar 4;29(5):750-762.e3. doi: 10.1016/j.cub.2019.01.039. Epub 2019 Feb 14.


Genome-wide Approaches to Investigate Anthelmintic Resistance.

Doyle SR, Cotton JA.

Trends Parasitol. 2019 Apr;35(4):289-301. doi: 10.1016/ Epub 2019 Feb 4. Review.


Physician Responses to Enhanced Prescription Drug Monitoring Program Profiles.

Leichtling G, Hildebran C, Novak K, Alley L, Doyle S, Reilly C, Weiner SG.

Pain Med. 2019 Jan 28. doi: 10.1093/pm/pny291. [Epub ahead of print]


Engagement of Fas differentially regulates the production of LPS-induced proinflammatory cytokines and type I interferons.

Brennan K, Lyons C, Fernandes P, Doyle S, Houston A, Brint E.

FEBS J. 2019 Feb;286(3):523-535. doi: 10.1111/febs.14727. Epub 2018 Dec 22.


Implementing the DICOM Standard for Digital Pathology.

Herrmann MD, Clunie DA, Fedorov A, Doyle SW, Pieper S, Klepeis V, Le LP, Mutter GL, Milstone DS, Schultz TJ, Kikinis R, Kotecha GK, Hwang DH, Andriole KP, Iafrate AJ, Brink JA, Boland GW, Dreyer KJ, Michalski M, Golden JA, Louis DN, Lennerz JK.

J Pathol Inform. 2018 Nov 2;9:37. doi: 10.4103/jpi.jpi_42_18. eCollection 2018.


Power laws and critical fragmentation in global forests.

Saravia LA, Doyle SR, Bond-Lamberty B.

Sci Rep. 2018 Dec 10;8(1):17766. doi: 10.1038/s41598-018-36120-w.


Spondylolysis 2019 update.

Berger RG, Doyle SM.

Curr Opin Pediatr. 2019 Feb;31(1):61-68. doi: 10.1097/MOP.0000000000000706.


Polythermal structure of a Himalayan debris-covered glacier revealed by borehole thermometry.

Miles KE, Hubbard B, Quincey DJ, Miles ES, Sherpa TC, Rowan AV, Doyle SH.

Sci Rep. 2018 Nov 14;8(1):16825. doi: 10.1038/s41598-018-34327-5.


The role of erlotinib and the Optune device in a patient with an epidermal growth factor receptor viii amplified glioblastoma.

Doyle SP, Gurbani SS, Ross AS, Rosen H, Barrett CD, Olson JJ, Shim H, Shu HK, Sengupta S.

Oxf Med Case Reports. 2018 Nov 5;2018(12):omy095. doi: 10.1093/omcr/omy095. eCollection 2018 Dec.


Hsp90 and Hsp70 chaperones: Collaborators in protein remodeling.

Genest O, Wickner S, Doyle SM.

J Biol Chem. 2019 Feb 8;294(6):2109-2120. doi: 10.1074/jbc.REV118.002806. Epub 2018 Nov 6. Review.


An Array-Based Ligand Discovery Platform for Proteins With Short Half-Lives.

Leifer BS, Doyle SK, Richters A, Evans HL, Koehler AN.

Methods Enzymol. 2018;610:191-218. doi: 10.1016/bs.mie.2018.09.019. Epub 2018 Oct 19.


Predictive Utility of Lung Allocation Score for Retransplantation Outcomes.

Doyle S, Hayes D Jr, Stewart WCL, Whitson BA, Tobias JD, Tumin D.

Ann Thorac Surg. 2018 Nov;106(5):1525-1532. doi: 10.1016/j.athoracsur.2018.05.085. Epub 2018 Jul 2.


Effect of preoperative inspiratory muscle training on physical functioning following esophagectomy.

Guinan EM, Forde C, O'Neill L, Gannon J, Doyle SL, Valkenet K, Trappenburg JCA, van Hillegersberg R, Ravi N, Hussey JM, Reynolds JV.

Dis Esophagus. 2019 Feb 1;32(2). doi: 10.1093/dote/doy091.


Effects of macroalgae loss in an Antarctic marine food web: applying extinction thresholds to food web studies.

Cordone G, Marina TI, Salinas V, Doyle SR, Saravia LA, Momo FR.

PeerJ. 2018 Sep 12;6:e5531. doi: 10.7717/peerj.5531. eCollection 2018.


Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure.

Commowick O, Istace A, Kain M, Laurent B, Leray F, Simon M, Pop SC, Girard P, Améli R, Ferré JC, Kerbrat A, Tourdias T, Cervenansky F, Glatard T, Beaumont J, Doyle S, Forbes F, Knight J, Khademi A, Mahbod A, Wang C, McKinley R, Wagner F, Muschelli J, Sweeney E, Roura E, Lladó X, Santos MM, Santos WP, Silva-Filho AG, Tomas-Fernandez X, Urien H, Bloch I, Valverde S, Cabezas M, Vera-Olmos FJ, Malpica N, Guttmann C, Vukusic S, Edan G, Dojat M, Styner M, Warfield SK, Cotton F, Barillot C.

Sci Rep. 2018 Sep 12;8(1):13650. doi: 10.1038/s41598-018-31911-7.


Anti-IL-5 treatments in patients with severe asthma by blood eosinophil thresholds: Indirect treatment comparison.

Busse W, Chupp G, Nagase H, Albers FC, Doyle S, Shen Q, Bratton DJ, Gunsoy NB.

J Allergy Clin Immunol. 2019 Jan;143(1):190-200.e20. doi: 10.1016/j.jaci.2018.08.031. Epub 2018 Sep 8.


Unique Obstacles for Mentorship During Training.

Doyle S, McCallister J.

Chest. 2018 Sep;154(3):734. doi: 10.1016/j.chest.2018.05.045. No abstract available.


Refining the phenotype associated with GNB1 mutations: Clinical data on 18 newly identified patients and review of the literature.

Hemati P, Revah-Politi A, Bassan H, Petrovski S, Bilancia CG, Ramsey K, Griffin NG, Bier L, Cho MT, Rosello M, Lynch SA, Colombo S, Weber A, Haug M, Heinzen EL, Sands TT, Narayanan V, Primiano M, Aggarwal VS, Millan F, Sattler-Holtrop SG, Caro-Llopis A, Pillar N, Baker J, Freedman R, Kroes HY, Sacharow S, Stong N, Lapunzina P, Schneider MC, Mendelsohn NJ, Singleton A, Loik Ramey V, Wou K, Kuzminsky A, Monfort S, Weiss M, Doyle S, Iglesias A, Martinez F, Mckenzie F, Orellana C, van Gassen KLI, Palomares M, Bazak L, Lee A, Bircher A, Basel-Vanagaite L, Hafström M, Houge G; C4RCD Research Group; DDD study, Goldstein DB, Anyane-Yeboa K.

Am J Med Genet A. 2018 Nov;176(11):2259-2275. doi: 10.1002/ajmg.a.40472. Epub 2018 Sep 8.


The involvement of the low-oxygen-activated locus of Burkholderia cenocepacia in adaptation during cystic fibrosis infection.

Cullen L, O'Connor A, McCormack S, Owens RA, Holt GS, Collins C, Callaghan M, Doyle S, Smith D, Schaffer K, Fitzpatrick DA, McClean S.

Sci Rep. 2018 Sep 6;8(1):13386. doi: 10.1038/s41598-018-31556-6.


Immune response to influenza vaccination in the elderly is altered by chronic medication use.

Agarwal D, Schmader KE, Kossenkov AV, Doyle S, Kurupati R, Ertl HCJ.

Immun Ageing. 2018 Aug 31;15:19. doi: 10.1186/s12979-018-0124-9. eCollection 2018.


Identifying a Novel Role for Fractalkine (CX3CL1) in Memory CD8+ T Cell Accumulation in the Omentum of Obesity-Associated Cancer Patients.

Conroy MJ, Maher SG, Melo AM, Doyle SL, Foley E, Reynolds JV, Long A, Lysaght J.

Front Immunol. 2018 Aug 13;9:1867. doi: 10.3389/fimmu.2018.01867. eCollection 2018.


Biology and genome of a newly discovered sibling species of Caenorhabditis elegans.

Kanzaki N, Tsai IJ, Tanaka R, Hunt VL, Liu D, Tsuyama K, Maeda Y, Namai S, Kumagai R, Tracey A, Holroyd N, Doyle SR, Woodruff GC, Murase K, Kitazume H, Chai C, Akagi A, Panda O, Ke HM, Schroeder FC, Wang J, Berriman M, Sternberg PW, Sugimoto A, Kikuchi T.

Nat Commun. 2018 Aug 10;9(1):3216. doi: 10.1038/s41467-018-05712-5.


Incidental Findings in Radiographic Imaging for Inpatients with Acute Ischemic Stroke.

Doyle SJ, George BP, Holloway RG, Kelly AG.

J Stroke Cerebrovasc Dis. 2018 Nov;27(11):3131-3136. doi: 10.1016/j.jstrokecerebrovasdis.2018.07.003. Epub 2018 Aug 2.


The RESTORE Randomized Controlled Trial: Impact of a Multidisciplinary Rehabilitative Program on Cardiorespiratory Fitness in Esophagogastric cancer Survivorship.

O'Neill LM, Guinan E, Doyle SL, Bennett AE, Murphy C, Elliott JA, OʼSullivan J, Reynolds JV, Hussey J.

Ann Surg. 2018 Nov;268(5):747-755. doi: 10.1097/SLA.0000000000002895.


Type 1 IFN Induction by Cytosolic Nucleic Acid Is Intact in Neonatal Mononuclear Cells, Contrasting Starkly with Neonatal Hyporesponsiveness to TLR Ligation Due to Independence from Endosome-Mediated IRF3 Activation.

Brennan K, O'Leary BD, Mc Laughlin D, Breen EP, Connolly E, Ali N, O'Driscoll DN, Ozaki E, Mahony R, Mulfaul K, Ryan AM, Ni Chianain A, McHugh A, Molloy EJ, Hogan AE, Paran S, McAuliffe FM, Doyle SL.

J Immunol. 2018 Aug 15;201(4):1131-1143. doi: 10.4049/jimmunol.1700956. Epub 2018 Jul 6.


The Fragility of Statistically Significant Results in Pediatric Orthopaedic Randomized Controlled Trials as Quantified by the Fragility Index: A Systematic Review.

Khormaee S, Choe J, Ruzbarsky JJ, Agarwal KN, Blanco JS, Doyle SM, Dodwell ER.

J Pediatr Orthop. 2018 Sep;38(8):e418-e423. doi: 10.1097/BPO.0000000000001201. Review.


Metagenomic analysis of basal ice from an Alaskan glacier.

Kayani MUR, Doyle SM, Sangwan N, Wang G, Gilbert JA, Christner BC, Zhu TF.

Microbiome. 2018 Jul 5;6(1):123. doi: 10.1186/s40168-018-0505-5.


Use of Group Concept Mapping to Identify Patient Domains of Uncertainty That Contribute to Emergency Department Use.

Rising KL, Doyle SK, Powell RE, Doty AMB, LaNoue M, Gerolamo AM.

J Emerg Nurs. 2019 Jan;45(1):46-53. doi: 10.1016/j.jen.2018.05.015. Epub 2018 Jun 28.


Aspergillus fumigatus Inhibits Pseudomonas aeruginosa in Co-culture: Implications of a Mutually Antagonistic Relationship on Virulence and Inflammation in the CF Airway.

Reece E, Doyle S, Greally P, Renwick J, McClean S.

Front Microbiol. 2018 Jun 5;9:1205. doi: 10.3389/fmicb.2018.01205. eCollection 2018.


Clubfoot Etiology: A Meta-Analysis and Systematic Review of Observational and Randomized Trials.

Chen C, Kaushal N, Scher DM, Doyle SM, Blanco JS, Dodwell ER.

J Pediatr Orthop. 2018 Sep;38(8):e462-e469. doi: 10.1097/BPO.0000000000001191. Review.


Systems impact of zinc chelation by the epipolythiodioxopiperazine dithiol gliotoxin in Aspergillus fumigatus: a new direction in natural product functionality.

Saleh AA, Jones GW, Tinley FC, Delaney SF, Alabbadi SH, Fenlon K, Doyle S, Owens RA.

Metallomics. 2018 Jun 20;10(6):854-866. doi: 10.1039/c8mt00052b.


Lithium Use in Pregnancy.

Doyle S, Green AJ.

Ir Med J. 2018 Jan 10;111(1):666. No abstract available.


Quantitative nuclear histomorphometry predicts oncotype DX risk categories for early stage ER+ breast cancer.

Whitney J, Corredor G, Janowczyk A, Ganesan S, Doyle S, Tomaszewski J, Feldman M, Gilmore H, Madabhushi A.

BMC Cancer. 2018 May 30;18(1):610. doi: 10.1186/s12885-018-4448-9.


Architecture of marine food webs: To be or not be a 'small-world'.

Marina TI, Saravia LA, Cordone G, Salinas V, Doyle SR, Momo FR.

PLoS One. 2018 May 29;13(5):e0198217. doi: 10.1371/journal.pone.0198217. eCollection 2018.


Supporting a Culture of Health in the Workplace: A Review of Evidence-Based Elements.

Flynn JP, Gascon G, Doyle S, Matson Koffman DM, Saringer C, Grossmeier J, Tivnan V, Terry P.

Am J Health Promot. 2018 Nov;32(8):1755-1788. doi: 10.1177/0890117118761887. Epub 2018 May 28.


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