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2'-O-ribose methylation of transfer RNA promotes recovery from oxidative stress in Saccharomyces cerevisiae.

Endres L, Rose RE, Doyle F, Rahn T, Lee B, Seaman J, McIntyre WD, Fabris D.

PLoS One. 2020 Feb 13;15(2):e0229103. doi: 10.1371/journal.pone.0229103. eCollection 2020.


Anticipatory care planning intervention for older adults at risk of functional decline: study protocol for a primary care cluster feasibility randomised trial.

Brazil K, Scott D, Wallace E, Clarke M, Fahey T, Gillespie P, O'Halloran P, Cardwell C, Carter G, McGlade K, Doyle F.

Trials. 2020 Feb 11;21(1):168. doi: 10.1186/s13063-020-4100-2.


Randomized Controlled Trial of Mobile Closed-Loop Control.

Kovatchev B, Anderson SM, Raghinaru D, Kudva YC, Laffel LM, Levy C, Pinsker JE, Wadwa RP, Buckingham B, Doyle FJ 3rd, Brown SA, Church MM, Dadlani V, Dassau E, Ekhlaspour L, Forlenza GP, Isganaitis E, Lam DW, Lum J, Beck RW; iDCL Study Group.

Diabetes Care. 2020 Jan 14. pii: dc191310. doi: 10.2337/dc19-1310. [Epub ahead of print]


Connolly Hospital Trauma Assessment Clinic (TAC): a virtual solution to patient flow.

Kelly M, O'Keeffe N, Francis A, Moran C, Gantley K, Doyle F, Kenny P.

Ir J Med Sci. 2019 Nov 26. doi: 10.1007/s11845-019-02126-0. [Epub ahead of print]


A Randomized, Placebo-Controlled Double-Blind Trial of a Closed-Loop Glucagon System for Post-Bariatric Hypoglycemia.

Mulla CM, Zavitsanou S, Laguna Sanz AJ, Pober D, Richardson L, Walcott P, Arora I, Newswanger B, Cummins MJ, Prestrelski SJ, Doyle FJ, Dassau E, Patti ME.

J Clin Endocrinol Metab. 2019 Nov 12. pii: dgz197. doi: 10.1210/clinem/dgz197. [Epub ahead of print]


Pharmaceutical-based entrainment of circadian phase via nonlinear model predictive control.

Abel JH, Chakrabarty A, Klerman EB, Doyle FJ 3rd.

Automatica (Oxf). 2019 Feb;100:336-348. doi: 10.1016/j.automatica.2018.11.012. Epub 2018 Dec 10.


Six-Month Randomized, Multicenter Trial of Closed-Loop Control in Type 1 Diabetes.

Brown SA, Kovatchev BP, Raghinaru D, Lum JW, Buckingham BA, Kudva YC, Laffel LM, Levy CJ, Pinsker JE, Wadwa RP, Dassau E, Doyle FJ 3rd, Anderson SM, Church MM, Dadlani V, Ekhlaspour L, Forlenza GP, Isganaitis E, Lam DW, Kollman C, Beck RW; iDCL Trial Research Group.

N Engl J Med. 2019 Oct 31;381(18):1707-1717. doi: 10.1056/NEJMoa1907863. Epub 2019 Oct 16.


Peer assessment to improve medical student's contributions to team-based projects: randomised controlled trial and qualitative follow-up.

Biesma R, Kennedy MC, Pawlikowska T, Brugha R, Conroy R, Doyle F.

BMC Med Educ. 2019 Oct 15;19(1):371. doi: 10.1186/s12909-019-1783-8.


Comparative efficacy of exercise and anti-hypertensive pharmacological interventions in reducing blood pressure in people with hypertension: A network meta-analysis.

Noone C, Leahy J, Morrissey EC, Newell J, Newell M, Dwyer CP, Murphy J, Doyle F, Murphy AW, Molloy GJ.

Eur J Prev Cardiol. 2020 Feb;27(3):247-255. doi: 10.1177/2047487319879786. Epub 2019 Oct 15.


Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder.

Dean KR, Hammamieh R, Mellon SH, Abu-Amara D, Flory JD, Guffanti G, Wang K, Daigle BJ Jr, Gautam A, Lee I, Yang R, Almli LM, Bersani FS, Chakraborty N, Donohue D, Kerley K, Kim TK, Laska E, Young Lee M, Lindqvist D, Lori A, Lu L, Misganaw B, Muhie S, Newman J, Price ND, Qin S, Reus VI, Siegel C, Somvanshi PR, Thakur GS, Zhou Y; PTSD Systems Biology Consortium, Hood L, Ressler KJ, Wolkowitz OM, Yehuda R, Jett M, Doyle FJ 3rd, Marmar C.

Mol Psychiatry. 2019 Sep 10. doi: 10.1038/s41380-019-0496-z. [Epub ahead of print]


A systematic review and meta-analysis of the effects of cardiac rehabilitation interventions on cognitive impairment following stroke.

Jeffares I, Merriman NA, Rohde D, McLoughlin A, Scally B, Doyle F, Horgan F, Hickey A.

Disabil Rehabil. 2019 Jul 24:1-16. doi: 10.1080/09638288.2019.1641850. [Epub ahead of print]


Mechanistic inferences on metabolic dysfunction in posttraumatic stress disorder from an integrated model and multiomic analysis: role of glucocorticoid receptor sensitivity.

Somvanshi PR, Mellon SH, Flory JD, Abu-Amara D; PTSD Systems Biology Consortium;, Wolkowitz OM, Yehuda R, Jett M, Hood L, Marmar C, Doyle FJ 3rd.

Am J Physiol Endocrinol Metab. 2019 Nov 1;317(5):E879-E898. doi: 10.1152/ajpendo.00065.2019. Epub 2019 Jul 19.


Reply to Furlan et al.: The role of SIRT1 in cell autonomous clock function.

Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ 3rd.

Proc Natl Acad Sci U S A. 2019 Jul 2;116(27):13173. doi: 10.1073/pnas.1907923116. Epub 2019 Jun 25. No abstract available.


A New Animal Model of Insulin-Glucose Dynamics in the Intraperitoneal Space Enhances Closed-Loop Control Performance.

Chakrabarty A, Gregory JM, Moore LM, Williams PE, Farmer B, Cherrington AD, Lord P, Shelton B, Cohen D, Zisser HC, Doyle FJ 3rd, Dassau E.

J Process Control. 2019 Apr;76:62-73. doi: 10.1016/j.jprocont.2019.01.002. Epub 2019 Feb 23.


Clinical Targets for Continuous Glucose Monitoring Data Interpretation: Recommendations From the International Consensus on Time in Range.

Battelino T, Danne T, Bergenstal RM, Amiel SA, Beck R, Biester T, Bosi E, Buckingham BA, Cefalu WT, Close KL, Cobelli C, Dassau E, DeVries JH, Donaghue KC, Dovc K, Doyle FJ 3rd, Garg S, Grunberger G, Heller S, Heinemann L, Hirsch IB, Hovorka R, Jia W, Kordonouri O, Kovatchev B, Kowalski A, Laffel L, Levine B, Mayorov A, Mathieu C, Murphy HR, Nimri R, Nørgaard K, Parkin CG, Renard E, Rodbard D, Saboo B, Schatz D, Stoner K, Urakami T, Weinzimer SA, Phillip M.

Diabetes Care. 2019 Aug;42(8):1593-1603. doi: 10.2337/dci19-0028. Epub 2019 Jun 8. Review.


Polygenic risk associated with post-traumatic stress disorder onset and severity.

Misganaw B, Guffanti G, Lori A, Abu-Amara D, Flory JD; SBPBC, Mueller S, Yehuda R, Jett M, Marmar CR, Ressler KJ, Doyle FJ 3rd.

Transl Psychiatry. 2019 Jun 7;9(1):165. doi: 10.1038/s41398-019-0497-3.


Theory Content, Question-Behavior Effects, or Form of Delivery Effects for Intention to Become an Organ Donor? Two Randomized Trials.

Doyle F, Morgan K, Mathew M, Palatty P, Kamat P, Doherty S, Quigley J, Henderson J, O'Carroll R.

Int J Environ Res Public Health. 2019 Apr 11;16(7). pii: E1304. doi: 10.3390/ijerph16071304.


Population genomic analyses reveal a highly differentiated and endangered genetic cluster of northern goshawks (Accipiter gentilis laingi) in Haida Gwaii.

Geraldes A, Askelson KK, Nikelski E, Doyle FI, Harrower WL, Winker K, Irwin DE.

Evol Appl. 2019 Jan 12;12(4):757-772. doi: 10.1111/eva.12754. eCollection 2019 Apr.


Effectiveness of psychological intervention as add-on to standard cardiac rehabilitation: Time to adopt new methods or keep doing more of the same?

Pedersen SS, Doyle F.

Eur J Prev Cardiol. 2019 Jul;26(10):1032-1034. doi: 10.1177/2047487319840176. Epub 2019 Mar 28. No abstract available.


Metabolomic analysis of male combat veterans with post traumatic stress disorder.

Mellon SH, Bersani FS, Lindqvist D, Hammamieh R, Donohue D, Dean K, Jett M, Yehuda R, Flory J, Reus VI, Bierer LM, Makotkine I, Abu Amara D, Henn Haase C, Coy M, Doyle FJ 3rd, Marmar C, Wolkowitz OM.

PLoS One. 2019 Mar 18;14(3):e0213839. doi: 10.1371/journal.pone.0213839. eCollection 2019.


Doctors don't Do-little: a national cross-sectional study of workplace well-being of hospital doctors in Ireland.

Hayes B, Prihodova L, Walsh G, Doyle F, Doherty S.

BMJ Open. 2019 Mar 10;9(3):e025433. doi: 10.1136/bmjopen-2018-025433.


Inadequate assessment of adherence to maintenance medication leads to loss of power and increased costs in trials of severe asthma therapy: results from a systematic literature review and modelling study.

Mokoka MC, McDonnell MJ, MacHale E, Cushen B, Boland F, Cormican S, Doherty C, Doyle F, Costello RW, Greene G.

Eur Respir J. 2019 May 18;53(5). pii: 1802161. doi: 10.1183/13993003.02161-2018. Print 2019 May.


Addressing cognitive impairment following stroke: systematic review and meta-analysis of non-randomised controlled studies of psychological interventions.

Merriman NA, Sexton E, McCabe G, Walsh ME, Rohde D, Gorman A, Jeffares I, Donnelly NA, Pender N, Williams DJ, Horgan F, Doyle F, Wren MA, Bennett KE, Hickey A.

BMJ Open. 2019 Feb 27;9(2):e024429. doi: 10.1136/bmjopen-2018-024429.


Multivariate learning framework for long-term adaptation in the artificial pancreas.

Shi D, Dassau E, Doyle FJ 3rd.

Bioeng Transl Med. 2018 Nov 12;4(1):61-74. doi: 10.1002/btm2.10119. eCollection 2019 Jan.


A national child mental health literacy initiative is needed to reduce childhood mental health disorders.

Tully LA, Hawes DJ, Doyle FL, Sawyer MG, Dadds MR.

Aust N Z J Psychiatry. 2019 Apr;53(4):286-290. doi: 10.1177/0004867418821440. Epub 2019 Jan 17.


The International Diabetes Closed-Loop Study: Testing Artificial Pancreas Component Interoperability.

Anderson SM, Dassau E, Raghinaru D, Lum J, Brown SA, Pinsker JE, Church MM, Levy C, Lam D, Kudva YC, Buckingham B, Forlenza GP, Wadwa RP, Laffel L, Doyle FJ 3rd, DeVries JH, Renard E, Cobelli C, Boscari F, Del Favero S, Kovatchev BP.

Diabetes Technol Ther. 2019 Feb;21(2):73-80. doi: 10.1089/dia.2018.0308. Epub 2019 Jan 16.


Implementation of a Quit Smoking Programme in Community Adult Mental Health Services-A Qualitative Study.

Burns A, Webb M, Stynes G, O'Brien T, Rohde D, Strawbridge J, Clancy L, Doyle F.

Front Psychiatry. 2018 Dec 21;9:670. doi: 10.3389/fpsyt.2018.00670. eCollection 2018.


Prevalence of Smoking and Provision of Smoking Cessation Advice during Hospitalization

Najeeb N, Halawani M, McElvaney NG, Doyle F.

Ir Med J. 2018 Oct 11;111(9):821.


Design and Clinical Evaluation of the Interoperable Artificial Pancreas System (iAPS) Smartphone App: Interoperable Components with Modular Design for Progressive Artificial Pancreas Research and Development.

Deshpande S, Pinsker JE, Zavitsanou S, Shi D, Tompot R, Church MM, Andre C, Doyle FJ 3rd, Dassau E.

Diabetes Technol Ther. 2019 Jan;21(1):35-43. doi: 10.1089/dia.2018.0278. Epub 2018 Dec 14.


Prospective study of provided smoking cessation care in an inpatient psychiatric setting.

Burns A, Lucey JV, Strawbridge J, Clancy L, Doyle F.

J Psychosom Res. 2018 Dec;115:24-31. doi: 10.1016/j.jpsychores.2018.10.006. Epub 2018 Oct 14.


Novel Angiographic Scores for evaluation of Large Vessel Vasculitis.

Tombetti E, Godi C, Ambrosi A, Doyle F, Jacobs A, Kiprianos AP, Youngstein T, Bechman K, Manfredi AA, Ariff B, Mason JC.

Sci Rep. 2018 Oct 29;8(1):15979. doi: 10.1038/s41598-018-34395-7.


Computational and experimental insights into the circadian effects of SIRT1.

Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ 3rd.

Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11643-11648. doi: 10.1073/pnas.1803410115. Epub 2018 Oct 22.


Chemical hazard prediction and hypothesis testing using quantitative adverse outcome pathways.

Perkins EJ, Gayen K, Shoemaker JE, Antczak P, Burgoon L, Falciani F, Gutsell S, Hodges G, Kienzler A, Knapen D, McBride M, Willett C, Doyle FJ, Garcia-Reyero N.

ALTEX. 2019;36(1):91-102. doi: 10.14573/altex.1808241. Epub 2018 Oct 16.


A benchmarking study of father involvement in Australian child mental health services.

Dadds MR, Collins DAJ, Doyle FL, Tully LA, Hawes DJ, Lenroot RK, Anderson V, Frick PJ, Moul C, Kimonis ER.

PLoS One. 2018 Aug 28;13(8):e0203113. doi: 10.1371/journal.pone.0203113. eCollection 2018.


Adaptive Zone Model Predictive Control of Artificial Pancreas Based on Glucose- and Velocity-Dependent Control Penalties.

Shi D, Dassau E, Doyle FJ.

IEEE Trans Biomed Eng. 2019 Apr;66(4):1045-1054. doi: 10.1109/TBME.2018.2866392. Epub 2018 Aug 21.


Velocity-weighting & velocity-penalty MPC of an artificial pancreas: Improved safety & performance.

Gondhalekar R, Dassau E, Doyle FJ 3rd.

Automatica (Oxf). 2018 May;91:105-117. doi: 10.1016/j.automatica.2018.01.025. Epub 2018 Mar 20.


Entrainment of Circadian Rhythms Depends on Firing Rates and Neuropeptide Release of VIP SCN Neurons.

Mazuski C, Abel JH, Chen SP, Hermanstyne TO, Jones JR, Simon T, Doyle FJ 3rd, Herzog ED.

Neuron. 2018 Aug 8;99(3):555-563.e5. doi: 10.1016/j.neuron.2018.06.029. Epub 2018 Jul 12.


Extremum Seeking Control for Personalized Zone Adaptation in Model Predictive Control for Type 1 Diabetes.

Cao Z, Gondhalekar R, Dassau E, Doyle FJ.

IEEE Trans Biomed Eng. 2018 Aug;65(8):1859-1870. doi: 10.1109/TBME.2017.2783238. Epub 2017 Dec 13.


Evaluation of an Artificial Pancreas with Enhanced Model Predictive Control and a Glucose Prediction Trust Index with Unannounced Exercise.

Pinsker JE, Laguna Sanz AJ, Lee JB, Church MM, Andre C, Lindsey LE, Doyle FJ 3rd, Dassau E.

Diabetes Technol Ther. 2018 Jul;20(7):455-464. doi: 10.1089/dia.2018.0031.


Personalising adherence-enhancing interventions using a smart inhaler in patients with COPD: an exploratory cost-effectiveness analysis.

van Boven JFM, Cushen B, Sulaiman I, Greene G, MacHale E, Mokoka MC, Doyle F, Reilly RB, Bennett K, Costello RW.

NPJ Prim Care Respir Med. 2018 Jun 27;28(1):24. doi: 10.1038/s41533-018-0092-8.


KRAB-ZFP Repressors Enforce Quiescence of Oncogenic Human Herpesviruses.

Li X, Burton EM, Koganti S, Zhi J, Doyle F, Tenenbaum SA, Horn B, Bhaduri-McIntosh S.

J Virol. 2018 Jun 29;92(14). pii: e00298-18. doi: 10.1128/JVI.00298-18. Print 2018 Jul 15.


A novel statistical method for assessing effective adherence to medication and calculating optimal drug dosages.

Greene G, Costello RW, Cushen B, Sulaiman I, Mac Hale E, Conroy RM, Doyle F.

PLoS One. 2018 Apr 20;13(4):e0195663. doi: 10.1371/journal.pone.0195663. eCollection 2018.


Radiology reporting of obesity: a survey of patient and clinician attitudes.

Murray TE, Ma SD, Doyle F, Lee MJ.

Clin Radiol. 2018 May;73(5):506.e9-506.e15. doi: 10.1016/j.crad.2017.11.028. Epub 2018 Mar 10.


Body Mass Index Effect on Differing Responses to Psychological Stress in Blood Glucose Dynamics in Patients With Type 1 Diabetes.

Ozaslan B, Patek SD, Grabman JH, Shepard JA, Dassau E, Breton MD, Kudva YC, Brown SA, Basu A, Pinsker JE, Doyle FJ 3rd, Gonder-Frederick L.

J Diabetes Sci Technol. 2018 May;12(3):657-664. doi: 10.1177/1932296818758103. Epub 2018 Feb 8.


Real-Time Detection of Infusion Site Failures in a Closed-Loop Artificial Pancreas.

Howsmon DP, Baysal N, Buckingham BA, Forlenza GP, Ly TT, Maahs DM, Marcal T, Towers L, Mauritzen E, Deshpande S, Huyett LM, Pinsker JE, Gondhalekar R, Doyle FJ 3rd, Dassau E, Hahn J, Bequette BW.

J Diabetes Sci Technol. 2018 May;12(3):599-607. doi: 10.1177/1932296818755173. Epub 2018 Feb 1.


Design and Clinical Evaluation of a Novel Low-Glucose Prediction Algorithm with Mini-Dose Stable Glucagon Delivery in Post-Bariatric Hypoglycemia.

Laguna Sanz AJ, Mulla CM, Fowler KM, Cloutier E, Goldfine AB, Newswanger B, Cummins M, Deshpande S, Prestrelski SJ, Strange P, Zisser H, Doyle FJ 3rd, Dassau E, Patti ME.

Diabetes Technol Ther. 2018 Feb;20(2):127-139. doi: 10.1089/dia.2017.0298.


The Clinical Impact of Different Adherence Behaviors in Patients with Severe Chronic Obstructive Pulmonary Disease.

Cushen B, Sulaiman I, Greene G, MacHale E, Mokoka M, Reilly RB, Bennett K, Doyle F, van Boven JFM, Costello RW.

Am J Respir Crit Care Med. 2018 Jun 15;197(12):1630-1633. doi: 10.1164/rccm.201712-2469LE. No abstract available.


Managing cognitive impairment following stroke: protocol for a systematic review of non-randomised controlled studies of psychological interventions.

Merriman NA, Sexton E, Donnelly NA, McCabe G, Walsh ME, Rohde D, Gorman A, Jeffares I, Pender N, Williams D, Horgan F, Doyle F, Wren MA, Bennett KE, Hickey A.

BMJ Open. 2018 Jan 10;8(1):e019001. doi: 10.1136/bmjopen-2017-019001.


A randomised clinical trial of feedback on inhaler adherence and technique in patients with severe uncontrolled asthma.

Sulaiman I, Greene G, MacHale E, Seheult J, Mokoka M, D'Arcy S, Taylor T, Murphy DM, Hunt E, Lane SJ, Diette GB, FitzGerald JM, Boland F, Sartini Bhreathnach A, Cushen B, Reilly RB, Doyle F, Costello RW.

Eur Respir J. 2018 Jan 4;51(1). pii: 1701126. doi: 10.1183/13993003.01126-2017. Print 2018 Jan.

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